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The map label for this gene is rpmI [H]

Identifier: 154245877

GI number: 154245877

Start: 2188321

End: 2189532

Strand: Reverse

Name: rpmI [H]

Synonym: Xaut_1933

Alternate gene names: 154245877

Gene position: 2189532-2188321 (Counterclockwise)

Preceding gene: 154245878

Following gene: 154245876

Centisome position: 41.24

GC content: 67.49

Gene sequence:

>1212_bases
ATGCTGGTAGCCGTCATAGCCGGTGTAGGTGCCGGTTGCCGGATTGTAGGAGCGGTAGCGCTGCGCGCAGTAGGCCACCG
CATCGTCGCCGTAGACCGGCTCCGCCGTGGCAGCCACGGCACCCAGGGCAAGGCCGCTGGCGACGCCGAGCGCGATCCAC
GCGCCGCTGTTGTTATAATAGCCCCAGCCCCAGCCCGGCCGGTACCAGCCCCAACCGGGACGCCACGCACCCGGACCCCA
CGCGCCCGGCGGCGGGCGCCAGCCCGGATGACCCCAGCCAGGCCCGCCAGGACCCCAGCCGGGACGTCCCGGACCCCAGC
CCGGGCGAACCGGACCAGGACGAAAGCCCGGATGATAGCCACCCACATAGCGGGGGCCGACGGCACGGGGCCCCACATAA
CGCGCGCCGCCATAGCGCGGCCCAACCATGCGCGCGCCACCGCCGTAGCGGGGACCACCCATTCTCACGCCGCCGCCACG
ATACGGCCCGCCGCGGTAGGCGACGGTGTCCACGGCCGCGGCGCTGTTCTGCATGTCTGCGTTCACGAGACCGAGCCGCA
GCGCCTGCGCGCTGGCGGGCGCTCCGGAAAACGAGAGCATGCTACCAGCGACGATCGCGGCCGCGAGCAGTGCCACTCTT
TTCGTTCCGAACATGATGCTCACTCCCTTAACGCGATACAGGCTCGGCGGAATTTGTGTCGATTGTTTCGCCGGACCTTT
GGTAACTTACGGCTACAACGCGGCGAAGTTGTTGCCGTTGCTCAAATTCGGACCGCCCGCGTTCAAGCCTGCGTGACGAT
GCACTACACAAATTCCCTCGCGCCGCAGCACCCACTCGCGGCCACGGCGCCTGCGGGCGCTTGCCTTTCCCGTCATCCTC
CTGTAACGACTGCCGCCTTCGAGCCGGCCGGCGAACAAGGGCTGCCGCGCTGGCTCATATCGCTCAACAGCAACAAGAGG
CTGAGCGTTCCCCGCCGCAAGGCGTGGCGAACCCATGCCACGGAGAGCCAAATGCCCAAGATGAAGACCAAGTCGGGAGC
CAAGAAACGCTTCCGCCTGACGGGTACGGGAAAAGTGATCGCGGGCCAGGCCGGCAAGCGCCATGGCATGATCAAGCGGA
CCAACAGCCAGATCCGCAACCAGCGCGGCACGACCATCCTCGCCGAGTGCGATGGACGGATCATCCGCAAGTCGTTCCTG
CCGAACGGCTGA

Upstream 100 bases:

>100_bases
CTCTGGCACCCGCCAAACCCTGATCGCTGACCTGATAGCTCAGCCCGGCGCCAGGCGCCGGGCTGCAGTCGCTCAAGCCC
CGTCCCGCTCAGGGACAGGG

Downstream 100 bases:

>100_bases
CGCCGCACCGCGATCTGAAGGAGTTTTTCCATGGCCCGCGTCAAACGTGGCGTTACCTCGCACGCCAAGCACAAGAAGGT
CTTTGAAGCCGCCAAGGGCT

Product: 50S ribosomal protein L35

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MLVAVIAGVGAGCRIVGAVALRAVGHRIVAVDRLRRGSHGTQGKAAGDAERDPRAAVVIIAPAPARPVPAPTGTPRTRTP
RARRRAPARMTPARPARTPAGTSRTPARANRTRTKARMIATHIAGADGTGPHITRAAIARPNHARATAVAGTTHSHAAAT
IRPAAVGDGVHGRGAVLHVCVHETEPQRLRAGGRSGKREHATSDDRGREQCHSFRSEHDAHSLNAIQARRNLCRLFRRTF
GNLRLQRGEVVAVAQIRTARVQACVTMHYTNSLAPQHPLAATAPAGACLSRHPPVTTAAFEPAGEQGLPRWLISLNSNKR
LSVPRRKAWRTHATESQMPKMKTKSGAKKRFRLTGTGKVIAGQAGKRHGMIKRTNSQIRNQRGTTILAECDGRIIRKSFL
PNG

Sequences:

>Translated_403_residues
MLVAVIAGVGAGCRIVGAVALRAVGHRIVAVDRLRRGSHGTQGKAAGDAERDPRAAVVIIAPAPARPVPAPTGTPRTRTP
RARRRAPARMTPARPARTPAGTSRTPARANRTRTKARMIATHIAGADGTGPHITRAAIARPNHARATAVAGTTHSHAAAT
IRPAAVGDGVHGRGAVLHVCVHETEPQRLRAGGRSGKREHATSDDRGREQCHSFRSEHDAHSLNAIQARRNLCRLFRRTF
GNLRLQRGEVVAVAQIRTARVQACVTMHYTNSLAPQHPLAATAPAGACLSRHPPVTTAAFEPAGEQGLPRWLISLNSNKR
LSVPRRKAWRTHATESQMPKMKTKSGAKKRFRLTGTGKVIAGQAGKRHGMIKRTNSQIRNQRGTTILAECDGRIIRKSFL
PNG
>Mature_403_residues
MLVAVIAGVGAGCRIVGAVALRAVGHRIVAVDRLRRGSHGTQGKAAGDAERDPRAAVVIIAPAPARPVPAPTGTPRTRTP
RARRRAPARMTPARPARTPAGTSRTPARANRTRTKARMIATHIAGADGTGPHITRAAIARPNHARATAVAGTTHSHAAAT
IRPAAVGDGVHGRGAVLHVCVHETEPQRLRAGGRSGKREHATSDDRGREQCHSFRSEHDAHSLNAIQARRNLCRLFRRTF
GNLRLQRGEVVAVAQIRTARVQACVTMHYTNSLAPQHPLAATAPAGACLSRHPPVTTAAFEPAGEQGLPRWLISLNSNKR
LSVPRRKAWRTHATESQMPKMKTKSGAKKRFRLTGTGKVIAGQAGKRHGMIKRTNSQIRNQRGTTILAECDGRIIRKSFL
PNG

Specific function: Unknown

COG id: COG0291

COG function: function code J; Ribosomal protein L35

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L35P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021137
- InterPro:   IPR018265
- InterPro:   IPR001706 [H]

Pfam domain/function: PF01632 Ribosomal_L35p [H]

EC number: NA

Molecular weight: Translated: 43177; Mature: 43177

Theoretical pI: Translated: 12.51; Mature: 12.51

Prosite motif: PS00936 RIBOSOMAL_L35

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVAVIAGVGAGCRIVGAVALRAVGHRIVAVDRLRRGSHGTQGKAAGDAERDPRAAVVII
CEEEEEECCCCCHHHHHHHHHHHHCCHHEEHHHHHCCCCCCCCCCCCCCCCCCCEEEEEE
APAPARPVPAPTGTPRTRTPRARRRAPARMTPARPARTPAGTSRTPARANRTRTKARMIA
ECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
THIAGADGTGPHITRAAIARPNHARATAVAGTTHSHAAATIRPAAVGDGVHGRGAVLHVC
HHHCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCCEEEECHHCCCCCCCCCEEEEEE
VHETEPQRLRAGGRSGKREHATSDDRGREQCHSFRSEHDAHSLNAIQARRNLCRLFRRTF
EECCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
GNLRLQRGEVVAVAQIRTARVQACVTMHYTNSLAPQHPLAATAPAGACLSRHPPVTTAAF
CCCEEECCCEEEEEHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCEEEC
EPAGEQGLPRWLISLNSNKRLSVPRRKAWRTHATESQMPKMKTKSGAKKRFRLTGTGKVI
CCCCCCCCCEEEEEECCCCEECCCHHHHHHHCCCHHHCCCHHHCCCCCEEEEEECCCEEE
AGQAGKRHGMIKRTNSQIRNQRGTTILAECDGRIIRKSFLPNG
ECCCCCCCCCEEHHHHHHHHCCCCEEEEECCCHHHHHHCCCCC
>Mature Secondary Structure
MLVAVIAGVGAGCRIVGAVALRAVGHRIVAVDRLRRGSHGTQGKAAGDAERDPRAAVVII
CEEEEEECCCCCHHHHHHHHHHHHCCHHEEHHHHHCCCCCCCCCCCCCCCCCCCEEEEEE
APAPARPVPAPTGTPRTRTPRARRRAPARMTPARPARTPAGTSRTPARANRTRTKARMIA
ECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
THIAGADGTGPHITRAAIARPNHARATAVAGTTHSHAAATIRPAAVGDGVHGRGAVLHVC
HHHCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCCEEEECHHCCCCCCCCCEEEEEE
VHETEPQRLRAGGRSGKREHATSDDRGREQCHSFRSEHDAHSLNAIQARRNLCRLFRRTF
EECCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
GNLRLQRGEVVAVAQIRTARVQACVTMHYTNSLAPQHPLAATAPAGACLSRHPPVTTAAF
CCCEEECCCEEEEEHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCEEEC
EPAGEQGLPRWLISLNSNKRLSVPRRKAWRTHATESQMPKMKTKSGAKKRFRLTGTGKVI
CCCCCCCCCEEEEEECCCCEECCCHHHHHHHCCCHHHCCCHHHCCCCCEEEEEECCCEEE
AGQAGKRHGMIKRTNSQIRNQRGTTILAECDGRIIRKSFLPNG
ECCCCCCCCCEEHHHHHHHHCCCCEEEEECCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA