| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is sam [H]
Identifier: 154245850
GI number: 154245850
Start: 2156126
End: 2157040
Strand: Reverse
Name: sam [H]
Synonym: Xaut_1906
Alternate gene names: 154245850
Gene position: 2157040-2156126 (Counterclockwise)
Preceding gene: 154245851
Following gene: 154245849
Centisome position: 40.63
GC content: 66.45
Gene sequence:
>915_bases ATGCGTGCGCCGGAAGACACCCCAGCCGTTCCGGCGCACGCCCCCACCCTGGCTCATGCCCCCTATGCCGGCATCGCCCT CATGTGCGTCGCCGTGGCCAGTTTCGCGGTCACTGACACAACGGCCAAGTGGCTGAGCGGACATATCAATGTGTTCGTCG TGGTGTGGGCGCGCTATGTCATCCACTTCGCCTGCTCGCTGGTGGTGTTCAATCCTTGGACTGTGCCCGGCCTTCTGAAG ACGCGCCGCCCGCTGCTGCAGATCGGCCGTTCGGCCATGCTGTTCCTGACCACGGCGCTCAACTTCACGGCGCTCCAGGT GCTGCAGCTGGACCAGACCGTCTCCATCATGTTCTCGGTGCCGTTTTTCGTCGCCTTGTTCGCCGGCCCCCTGCTGGGGG AGCGGGTGGGCGTGCGGCGGTGGTGCGCCATCCTGGTGGGATTTGCCGGCATCCTTCTGGTGGTGCGGCCGGGAGCCGGC GGCATTCACCCCGCCGCCATCCTGTCCCTCGGTGCCGCGGCCACCTACGCGCTCTACGCCATCACCACCCGCATGCTGGC CAAGAGCGATTCGAGCGCCACGACACTGTTCTATTCGTCGCTGGTCGGTTCGGTGGCAGCGAGCCTGCCTTTGCCGTTCG TGTGGGAGACGCCGCGCGATCCCCTGGTCATCGGCGCGATGCTGGAATTGGGCATGGTCGCTGGCGTCGGCCACTTCCTG TTGATTCTCGCCCACGCCCGGGCACCTGCGGCGACGCTCGCGCCTTATATCTATACGCAGATCATCGCCATGATCGCACT GGGCTGGCTGGTGTTCGGCCAGGTACCGAGCGCCTGGACCCTCACCGGCGCAGGCGTTGTCATCGCCTCCGGCGCCTATC TCCTGGTGATGGAATCCCGCAGCCGCCGCGCCTGA
Upstream 100 bases:
>100_bases GCCACCATCGCCTTCGCCGCCTCGGCCGATTGCTCGTTCACCACCGGCGCCGTGTTCGACCTGTCGGGCGGCCGCGCCAC CTATTGAGACCGAATTTGCC
Downstream 100 bases:
>100_bases GAGATGCGGCCAAAACCTTGGGACGGATGTCGTGCGGGTTCGCGGACGCCTGGCGCACGCGTCAGATCCGTTGGGCGTTC TTCATGTTCCTGCGGCCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MRAPEDTPAVPAHAPTLAHAPYAGIALMCVAVASFAVTDTTAKWLSGHINVFVVVWARYVIHFACSLVVFNPWTVPGLLK TRRPLLQIGRSAMLFLTTALNFTALQVLQLDQTVSIMFSVPFFVALFAGPLLGERVGVRRWCAILVGFAGILLVVRPGAG GIHPAAILSLGAAATYALYAITTRMLAKSDSSATTLFYSSLVGSVAASLPLPFVWETPRDPLVIGAMLELGMVAGVGHFL LILAHARAPAATLAPYIYTQIIAMIALGWLVFGQVPSAWTLTGAGVVIASGAYLLVMESRSRRA
Sequences:
>Translated_304_residues MRAPEDTPAVPAHAPTLAHAPYAGIALMCVAVASFAVTDTTAKWLSGHINVFVVVWARYVIHFACSLVVFNPWTVPGLLK TRRPLLQIGRSAMLFLTTALNFTALQVLQLDQTVSIMFSVPFFVALFAGPLLGERVGVRRWCAILVGFAGILLVVRPGAG GIHPAAILSLGAAATYALYAITTRMLAKSDSSATTLFYSSLVGSVAASLPLPFVWETPRDPLVIGAMLELGMVAGVGHFL LILAHARAPAATLAPYIYTQIIAMIALGWLVFGQVPSAWTLTGAGVVIASGAYLLVMESRSRRA >Mature_304_residues MRAPEDTPAVPAHAPTLAHAPYAGIALMCVAVASFAVTDTTAKWLSGHINVFVVVWARYVIHFACSLVVFNPWTVPGLLK TRRPLLQIGRSAMLFLTTALNFTALQVLQLDQTVSIMFSVPFFVALFAGPLLGERVGVRRWCAILVGFAGILLVVRPGAG GIHPAAILSLGAAATYALYAITTRMLAKSDSSATTLFYSSLVGSVAASLPLPFVWETPRDPLVIGAMLELGMVAGVGHFL LILAHARAPAATLAPYIYTQIIAMIALGWLVFGQVPSAWTLTGAGVVIASGAYLLVMESRSRRA
Specific function: Transports S-adenosylmethionine [H]
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32227; Mature: 32227
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAPEDTPAVPAHAPTLAHAPYAGIALMCVAVASFAVTDTTAKWLSGHINVFVVVWARYV CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH IHFACSLVVFNPWTVPGLLKTRRPLLQIGRSAMLFLTTALNFTALQVLQLDQTVSIMFSV HHHHHHHHEECCCCCCHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PFFVALFAGPLLGERVGVRRWCAILVGFAGILLVVRPGAGGIHPAAILSLGAAATYALYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHH ITTRMLAKSDSSATTLFYSSLVGSVAASLPLPFVWETPRDPLVIGAMLELGMVAGVGHFL HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHH LILAHARAPAATLAPYIYTQIIAMIALGWLVFGQVPSAWTLTGAGVVIASGAYLLVMESR HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEECCEEEEEEECC SRRA CCCC >Mature Secondary Structure MRAPEDTPAVPAHAPTLAHAPYAGIALMCVAVASFAVTDTTAKWLSGHINVFVVVWARYV CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH IHFACSLVVFNPWTVPGLLKTRRPLLQIGRSAMLFLTTALNFTALQVLQLDQTVSIMFSV HHHHHHHHEECCCCCCHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PFFVALFAGPLLGERVGVRRWCAILVGFAGILLVVRPGAGGIHPAAILSLGAAATYALYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHH ITTRMLAKSDSSATTLFYSSLVGSVAASLPLPFVWETPRDPLVIGAMLELGMVAGVGHFL HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHH LILAHARAPAATLAPYIYTQIIAMIALGWLVFGQVPSAWTLTGAGVVIASGAYLLVMESR HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEECCEEEEEEECC SRRA CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA