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The map label for this gene is yebA [H]

Identifier: 154245849

GI number: 154245849

Start: 2147455

End: 2149506

Strand: Reverse

Name: yebA [H]

Synonym: Xaut_1905

Alternate gene names: 154245849

Gene position: 2149506-2147455 (Counterclockwise)

Preceding gene: 154245850

Following gene: 154245848

Centisome position: 40.49

GC content: 67.98

Gene sequence:

>2052_bases
TTGCAGCATCGACGATCTGCCGGAGCCTGGCGCGATGCCACAAGCGCAGCCGGGCTCGGCGAGGACCCCCCGCTCGGGGT
GGACGGAGACGAGGAAGACATCGACCGTCGCCGGGTTTCCGTGCGCTGGTTCGCGGCGACGCTTCTGACGGCCCTGTGCG
GCTCCTTCCTCATGGGCGGCGCGGTCTATGCCGCGCTCGACGGCGAACACCGCTTCGCCCTGATGCCCGAAAAGGTGCGC
AACACCATCCGCGGCGCCCTCGCTTTGGGCGAGCGCCCGGTCAATGCCGCCCGCAAGGGCGATCGCATGTCCCTGCTCGG
CGACAGCGCCTCGGCGCGCCAGACCTTCCGCGTCTCCACCGCCACCAAGGTGGGCGACCGCGAGATCATCAAGGTGCGCC
CCTTCACCCGCGTCGCGGCCAACCTCGCCATGAGCACCACCTCGGTGTCGGCCAATATCCCCCGCTTCAACCCGGCCCAG
GTGGTGGCTGAATCGGTCTCCAAGGAAGAGGCGGCGCCGCAGGCCGAGCCGACCGGGGAAGTCACCCTGGTGATGCGCGA
CCTGTCGAGCCTGCCGCAGAGCACCAAGCTGGGCGCAGCGACTCCCATGGAGAACGTGCTGGTCAAGGTGCGCGAAGTGG
CCGAGCTGAGCCGGCCCGGGCCAGGCAATCCGGGTGCCCTGCCCCCCGCAATCGTCGGCGGCCCCGGCTTTGCCCCTCCG
GCCTCCCCCACGCCTTATCTGTCGTACGCCAGCGTCGGCGACGCCCTGGGCAACGGTGCCGGACTGCCGGGAAGCGCGGT
GCCCGGCGCCCATGCCCCCGGCCTGCCGGCCCAGCAGGCCATGCCCGGCAACATCAGCTTCGTGCCCAAGACCTCGGACG
AGACCTCCGGCGGCAACGATTGGTCCGATACGGCCGTGGTGGTGAAGAAGGGCGATACCATCGCCTCCATCCTCATCGAC
AACGGCGTCTCCAAGGAGGACGCCCGCGCCGCCGCCGCCGCCTTCGGCCGGGGCCGCGACGGCCAGGTGAAGGACGGCCT
GCGCATGCGCATGCTGCTCCAGGAAGAGAACAAGCGGGTCCGCCCGCTGCGGGTGTCGATCTTCAGCGACCTTGGCCACG
AAGGCACCGTCGCCTTGTCCGACAAGGACGAGTTCGTGAACGTACCCGAGCCGTCGGAAACCGAGATCGCAGGCATCTCC
GAGGATACGGACGACGACGACAGCGGGCCCGGCATCCGCCTCTATGAGAGCGTCTACGAGACCTGCCTGCGCAACGAAGT
GCCGCGCGCCGTCATCGCCGACATCATCCGCGTCTATTCCTTCGACGTGGATTTCCAGCGCCGGGTGCGGCCGGGTGACA
ATTTCGAGATCCTGTACTCAGACGATCCCGGCGCGTCGAACGACGTGCTCTACGCCGCGCTCACGGTGAACAAGGAAACC
CGGCGCTACTACCGCTTCCAGACCGCCGACGACGGCGTGGTCGATTATTACGACGACGACGGCAAGAGCGCGAAGAAGTT
CCTGGTCAGAAAGCCGCTTGCTGGCGGCATCATGCGCTCGCCGTTCGGCTATCGCCGCCATCCGATCCTCGGCTATTCCA
AGCTGCACACCGGCGTGGACTGGGCCGACGCCATCGGCACCCCCATCTATGCGGCGGGCAACGGCACCATCATCTACGCC
AACTGGAAATCGGGCTACGGCAAGCACACCGAGATCCAGCACGCCAACGGCTATGTCAGCACCTATTCCCACCAATCGGG
ATTTGCCCGCGGCATCCGCGAGGGCATGACGGTGCGCCAGGGCCAGCTCATCGGCTATATCGGCACCACCGGCCTCTCGA
CCGGCCCGCACCTCCATTACGAGGTGAAGATCAACGGCAATTTCGTGGATCCCATGCGCATCAAGCTGCCGCGCGGCCGG
GCGCTGGACGGGCGCTTCCTCGCCGAGTTCAAGCGCGAGCGTGAGCGTATCGAGGCGCTGCTGAGCCATGCGCCGGTGCC
GCCCCGCGTCGCGGCCGCCAGTGCCGGCGCCAAGAAGGCCGCCAGCAACTGA

Upstream 100 bases:

>100_bases
ACATTGACGGGTCGCAAGGCGAAAGGCATGGTCCGCTTTACGTCTTGGTGAAAGTTAAGCCTTTGCGCTGCCGGCGCGCG
CTCAGCTGAAGGGACGGATT

Downstream 100 bases:

>100_bases
GGGCCAGTCCCGAGCGCCTTCAGGCCAGGCCGGCCTGAAGGCGGATCCCTGCGCCATCCGGCCGGCCTGCGATGCCGCCA
GGCCGGCACGTAATCCGCCC

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 683; Mature: 683

Protein sequence:

>683_residues
MQHRRSAGAWRDATSAAGLGEDPPLGVDGDEEDIDRRRVSVRWFAATLLTALCGSFLMGGAVYAALDGEHRFALMPEKVR
NTIRGALALGERPVNAARKGDRMSLLGDSASARQTFRVSTATKVGDREIIKVRPFTRVAANLAMSTTSVSANIPRFNPAQ
VVAESVSKEEAAPQAEPTGEVTLVMRDLSSLPQSTKLGAATPMENVLVKVREVAELSRPGPGNPGALPPAIVGGPGFAPP
ASPTPYLSYASVGDALGNGAGLPGSAVPGAHAPGLPAQQAMPGNISFVPKTSDETSGGNDWSDTAVVVKKGDTIASILID
NGVSKEDARAAAAAFGRGRDGQVKDGLRMRMLLQEENKRVRPLRVSIFSDLGHEGTVALSDKDEFVNVPEPSETEIAGIS
EDTDDDDSGPGIRLYESVYETCLRNEVPRAVIADIIRVYSFDVDFQRRVRPGDNFEILYSDDPGASNDVLYAALTVNKET
RRYYRFQTADDGVVDYYDDDGKSAKKFLVRKPLAGGIMRSPFGYRRHPILGYSKLHTGVDWADAIGTPIYAAGNGTIIYA
NWKSGYGKHTEIQHANGYVSTYSHQSGFARGIREGMTVRQGQLIGYIGTTGLSTGPHLHYEVKINGNFVDPMRIKLPRGR
ALDGRFLAEFKRERERIEALLSHAPVPPRVAAASAGAKKAASN

Sequences:

>Translated_683_residues
MQHRRSAGAWRDATSAAGLGEDPPLGVDGDEEDIDRRRVSVRWFAATLLTALCGSFLMGGAVYAALDGEHRFALMPEKVR
NTIRGALALGERPVNAARKGDRMSLLGDSASARQTFRVSTATKVGDREIIKVRPFTRVAANLAMSTTSVSANIPRFNPAQ
VVAESVSKEEAAPQAEPTGEVTLVMRDLSSLPQSTKLGAATPMENVLVKVREVAELSRPGPGNPGALPPAIVGGPGFAPP
ASPTPYLSYASVGDALGNGAGLPGSAVPGAHAPGLPAQQAMPGNISFVPKTSDETSGGNDWSDTAVVVKKGDTIASILID
NGVSKEDARAAAAAFGRGRDGQVKDGLRMRMLLQEENKRVRPLRVSIFSDLGHEGTVALSDKDEFVNVPEPSETEIAGIS
EDTDDDDSGPGIRLYESVYETCLRNEVPRAVIADIIRVYSFDVDFQRRVRPGDNFEILYSDDPGASNDVLYAALTVNKET
RRYYRFQTADDGVVDYYDDDGKSAKKFLVRKPLAGGIMRSPFGYRRHPILGYSKLHTGVDWADAIGTPIYAAGNGTIIYA
NWKSGYGKHTEIQHANGYVSTYSHQSGFARGIREGMTVRQGQLIGYIGTTGLSTGPHLHYEVKINGNFVDPMRIKLPRGR
ALDGRFLAEFKRERERIEALLSHAPVPPRVAAASAGAKKAASN
>Mature_683_residues
MQHRRSAGAWRDATSAAGLGEDPPLGVDGDEEDIDRRRVSVRWFAATLLTALCGSFLMGGAVYAALDGEHRFALMPEKVR
NTIRGALALGERPVNAARKGDRMSLLGDSASARQTFRVSTATKVGDREIIKVRPFTRVAANLAMSTTSVSANIPRFNPAQ
VVAESVSKEEAAPQAEPTGEVTLVMRDLSSLPQSTKLGAATPMENVLVKVREVAELSRPGPGNPGALPPAIVGGPGFAPP
ASPTPYLSYASVGDALGNGAGLPGSAVPGAHAPGLPAQQAMPGNISFVPKTSDETSGGNDWSDTAVVVKKGDTIASILID
NGVSKEDARAAAAAFGRGRDGQVKDGLRMRMLLQEENKRVRPLRVSIFSDLGHEGTVALSDKDEFVNVPEPSETEIAGIS
EDTDDDDSGPGIRLYESVYETCLRNEVPRAVIADIIRVYSFDVDFQRRVRPGDNFEILYSDDPGASNDVLYAALTVNKET
RRYYRFQTADDGVVDYYDDDGKSAKKFLVRKPLAGGIMRSPFGYRRHPILGYSKLHTGVDWADAIGTPIYAAGNGTIIYA
NWKSGYGKHTEIQHANGYVSTYSHQSGFARGIREGMTVRQGQLIGYIGTTGLSTGPHLHYEVKINGNFVDPMRIKLPRGR
ALDGRFLAEFKRERERIEALLSHAPVPPRVAAASAGAKKAASN

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=230, Percent_Identity=33.9130434782609, Blast_Score=115, Evalue=8e-27,
Organism=Escherichia coli, GI87082174, Length=103, Percent_Identity=33.9805825242718, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 73273; Mature: 73273

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHRRSAGAWRDATSAAGLGEDPPLGVDGDEEDIDRRRVSVRWFAATLLTALCGSFLMGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AVYAALDGEHRFALMPEKVRNTIRGALALGERPVNAARKGDRMSLLGDSASARQTFRVST
EEEEEECCCCEEEECCHHHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCCCCEEEEEEH
ATKVGDREIIKVRPFTRVAANLAMSTTSVSANIPRFNPAQVVAESVSKEEAAPQAEPTGE
HHCCCCCEEEEECCHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
VTLVMRDLSSLPQSTKLGAATPMENVLVKVREVAELSRPGPGNPGALPPAIVGGPGFAPP
EEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCC
ASPTPYLSYASVGDALGNGAGLPGSAVPGAHAPGLPAQQAMPGNISFVPKTSDETSGGND
CCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCCC
WSDTAVVVKKGDTIASILIDNGVSKEDARAAAAAFGRGRDGQVKDGLRMRMLLQEENKRV
CCCCEEEEECCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCC
RPLRVSIFSDLGHEGTVALSDKDEFVNVPEPSETEIAGISEDTDDDDSGPGIRLYESVYE
CEEEEEEHHHCCCCCEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHH
TCLRNEVPRAVIADIIRVYSFDVDFQRRVRPGDNFEILYSDDPGASNDVLYAALTVNKET
HHHHCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEECCCCCCCCCEEEEEEEECHHH
RRYYRFQTADDGVVDYYDDDGKSAKKFLVRKPLAGGIMRSPFGYRRHPILGYSKLHTGVD
HHEEEEECCCCCEEEEECCCCHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCHHHHHCCCC
WADAIGTPIYAAGNGTIIYANWKSGYGKHTEIQHANGYVSTYSHQSGFARGIREGMTVRQ
HHHHCCCCEEECCCCEEEEEECCCCCCCCCEEEECCCCEEECCCHHHHHHHHHHCCEEEC
GQLIGYIGTTGLSTGPHLHYEVKINGNFVDPMRIKLPRGRALDGRFLAEFKRERERIEAL
CCEEEEEECCCCCCCCEEEEEEEECCCEECCEEEECCCCCCCCHHHHHHHHHHHHHHHHH
LSHAPVPPRVAAASAGAKKAASN
HHCCCCCCCHHHHCCCCHHCCCC
>Mature Secondary Structure
MQHRRSAGAWRDATSAAGLGEDPPLGVDGDEEDIDRRRVSVRWFAATLLTALCGSFLMGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AVYAALDGEHRFALMPEKVRNTIRGALALGERPVNAARKGDRMSLLGDSASARQTFRVST
EEEEEECCCCEEEECCHHHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCCCCEEEEEEH
ATKVGDREIIKVRPFTRVAANLAMSTTSVSANIPRFNPAQVVAESVSKEEAAPQAEPTGE
HHCCCCCEEEEECCHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
VTLVMRDLSSLPQSTKLGAATPMENVLVKVREVAELSRPGPGNPGALPPAIVGGPGFAPP
EEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCC
ASPTPYLSYASVGDALGNGAGLPGSAVPGAHAPGLPAQQAMPGNISFVPKTSDETSGGND
CCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCCC
WSDTAVVVKKGDTIASILIDNGVSKEDARAAAAAFGRGRDGQVKDGLRMRMLLQEENKRV
CCCCEEEEECCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCC
RPLRVSIFSDLGHEGTVALSDKDEFVNVPEPSETEIAGISEDTDDDDSGPGIRLYESVYE
CEEEEEEHHHCCCCCEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHH
TCLRNEVPRAVIADIIRVYSFDVDFQRRVRPGDNFEILYSDDPGASNDVLYAALTVNKET
HHHHCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEECCCCCCCCCEEEEEEEECHHH
RRYYRFQTADDGVVDYYDDDGKSAKKFLVRKPLAGGIMRSPFGYRRHPILGYSKLHTGVD
HHEEEEECCCCCEEEEECCCCHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCHHHHHCCCC
WADAIGTPIYAAGNGTIIYANWKSGYGKHTEIQHANGYVSTYSHQSGFARGIREGMTVRQ
HHHHCCCCEEECCCCEEEEEECCCCCCCCCEEEECCCCEEECCCHHHHHHHHHHCCEEEC
GQLIGYIGTTGLSTGPHLHYEVKINGNFVDPMRIKLPRGRALDGRFLAEFKRERERIEAL
CCEEEEEECCCCCCCCEEEEEEEECCCEECCEEEECCCCCCCCHHHHHHHHHHHHHHHHH
LSHAPVPPRVAAASAGAKKAASN
HHCCCCCCCHHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]