| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is pqqB [H]
Identifier: 154245746
GI number: 154245746
Start: 2030167
End: 2031066
Strand: Reverse
Name: pqqB [H]
Synonym: Xaut_1802
Alternate gene names: 154245746
Gene position: 2031066-2030167 (Counterclockwise)
Preceding gene: 154245747
Following gene: 154245745
Centisome position: 38.26
GC content: 68.78
Gene sequence:
>900_bases ATGCAGGTGATCGTTCTCGGTTCGGCGGCCGGCGGCGGCGTTCCCCAATGGAATTGCCGCTGTCCGGTGTGCCGCATGGC CTGGTCGGGAGACCCCCGCGTCACGCCGCGCACCCAGTCCAGCATCGCCGTCTCCGCTGACGGCAGCGATTGGGTCCTGC TCAACGCCTCGCCCGACCTTCGGGCGCAGATTTCAGCTACGCCCGCGCTCAAGCCGCGCATGGGCGAGCGCGACAGCCCC ATTCGCGCGGTCGTCCTCACCAACGGGGACGTGGACCACATCGCCGGCCTGCTCTCGCTCCGGGAATCCCAGCCTTTCGC CCTCTTCGGCACGGCCGAGACGCTGGGGCTGCTGAAGGAGAACCAGGTGTTCGACGTGGTGGCGCCAGCCTTCGTCAGCC GCACCGCCGCCGAGTTCGGTCGTCCCTTTTCTCCGGTGCCGGGGCTGACCATGGAATTCTTCACCGTGCCCGGAAAGGTG CCGCTGTGGCGGGAGGACGCCAGCCTCGTCATCGGCGAGGAGACCGGCTCCACCGTGGGTGTCACCATCACCTGCGCCGA CAAGCGCCTCGTCTATATTCCCGGCTGCGCGGCGGTGACGCCGGCGGTGCGCGAGCGCATCGTCGGGGCCGATCTGCTGT TCTTCGACGGCACGCTCTATCGCGACGACGAGATGATCGAGGCCGGCGTCGGCACCAAGACCGGCGCGCGCATGGGGCAC CTCTCCATGTCGGGCGACGGCGGCACCGTGGCGCTGCTCAAGGACGTGCCGGTGGCGAGGCGTGTCTTCATCCACATCAA CAACACCAACCCGGCGCTGGTGGATGGCTCGCAGGAGCGCCACGCCGTGGAGCAGGCCGGCTGGACGGTGGCCCGCGACG GAATGGAGTTCTCGTTATGA
Upstream 100 bases:
>100_bases GTCTGCGTGGGCATGGAAGTCACCGCTTATCTGCCGGCCGATTTCTGATCCGAATGAGGTCGGTGGCCGGGAGCGATAAG GCAGGAGCGTTCGACGCATC
Downstream 100 bases:
>100_bases CCTTCCTCGCCCTTGCCGAGCCGCTGGTCTTCCCGCCCCTGCCCGCGCCGTCCGAGCCGCTGTCGCCCGAAGGGCTGGAA GCGGCGCTGCGGGAGGTGGG
Product: pyrroloquinoline quinone biosynthesis protein PqqB
Products: NA
Alternate protein names: Pyrroloquinoline quinone biosynthesis protein B [H]
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MQVIVLGSAAGGGVPQWNCRCPVCRMAWSGDPRVTPRTQSSIAVSADGSDWVLLNASPDLRAQISATPALKPRMGERDSP IRAVVLTNGDVDHIAGLLSLRESQPFALFGTAETLGLLKENQVFDVVAPAFVSRTAAEFGRPFSPVPGLTMEFFTVPGKV PLWREDASLVIGEETGSTVGVTITCADKRLVYIPGCAAVTPAVRERIVGADLLFFDGTLYRDDEMIEAGVGTKTGARMGH LSMSGDGGTVALLKDVPVARRVFIHINNTNPALVDGSQERHAVEQAGWTVARDGMEFSL
Sequences:
>Translated_299_residues MQVIVLGSAAGGGVPQWNCRCPVCRMAWSGDPRVTPRTQSSIAVSADGSDWVLLNASPDLRAQISATPALKPRMGERDSP IRAVVLTNGDVDHIAGLLSLRESQPFALFGTAETLGLLKENQVFDVVAPAFVSRTAAEFGRPFSPVPGLTMEFFTVPGKV PLWREDASLVIGEETGSTVGVTITCADKRLVYIPGCAAVTPAVRERIVGADLLFFDGTLYRDDEMIEAGVGTKTGARMGH LSMSGDGGTVALLKDVPVARRVFIHINNTNPALVDGSQERHAVEQAGWTVARDGMEFSL >Mature_299_residues MQVIVLGSAAGGGVPQWNCRCPVCRMAWSGDPRVTPRTQSSIAVSADGSDWVLLNASPDLRAQISATPALKPRMGERDSP IRAVVLTNGDVDHIAGLLSLRESQPFALFGTAETLGLLKENQVFDVVAPAFVSRTAAEFGRPFSPVPGLTMEFFTVPGKV PLWREDASLVIGEETGSTVGVTITCADKRLVYIPGCAAVTPAVRERIVGADLLFFDGTLYRDDEMIEAGVGTKTGARMGH LSMSGDGGTVALLKDVPVARRVFIHINNTNPALVDGSQERHAVEQAGWTVARDGMEFSL
Specific function: May be involved in the transport of PQQ or its precursor to the periplasm [H]
COG id: COG1235
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pqqB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011842 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31833; Mature: 31833
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVIVLGSAAGGGVPQWNCRCPVCRMAWSGDPRVTPRTQSSIAVSADGSDWVLLNASPDL CEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEECCCCC RAQISATPALKPRMGERDSPIRAVVLTNGDVDHIAGLLSLRESQPFALFGTAETLGLLKE EEEEECCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECHHHHHHHCC NQVFDVVAPAFVSRTAAEFGRPFSPVPGLTMEFFTVPGKVPLWREDASLVIGEETGSTVG CCEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEECCCCEEEECCCCCEEE VTITCADKRLVYIPGCAAVTPAVRERIVGADLLFFDGTLYRDDEMIEAGVGTKTGARMGH EEEEECCCEEEEECCCHHCCHHHHHHHCCCEEEEECCEEECCCHHHCCCCCCCCCCEEEE LSMSGDGGTVALLKDVPVARRVFIHINNTNPALVDGSQERHAVEQAGWTVARDGMEFSL EEECCCCCEEEEEECCCCEEEEEEEECCCCCEEECCCHHHHHHHHCCCEEEECCEEECC >Mature Secondary Structure MQVIVLGSAAGGGVPQWNCRCPVCRMAWSGDPRVTPRTQSSIAVSADGSDWVLLNASPDL CEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEECCCCC RAQISATPALKPRMGERDSPIRAVVLTNGDVDHIAGLLSLRESQPFALFGTAETLGLLKE EEEEECCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECHHHHHHHCC NQVFDVVAPAFVSRTAAEFGRPFSPVPGLTMEFFTVPGKVPLWREDASLVIGEETGSTVG CCEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEECCCCEEEECCCCCEEE VTITCADKRLVYIPGCAAVTPAVRERIVGADLLFFDGTLYRDDEMIEAGVGTKTGARMGH EEEEECCCEEEEECCCHHCCHHHHHHHCCCEEEEECCEEECCCHHHCCCCCCCCCCEEEE LSMSGDGGTVALLKDVPVARRVFIHINNTNPALVDGSQERHAVEQAGWTVARDGMEFSL EEECCCCCEEEEEECCCCEEEEEEEECCCCCEEECCCHHHHHHHHCCCEEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA