Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is pqqB [H]

Identifier: 154245746

GI number: 154245746

Start: 2030167

End: 2031066

Strand: Reverse

Name: pqqB [H]

Synonym: Xaut_1802

Alternate gene names: 154245746

Gene position: 2031066-2030167 (Counterclockwise)

Preceding gene: 154245747

Following gene: 154245745

Centisome position: 38.26

GC content: 68.78

Gene sequence:

>900_bases
ATGCAGGTGATCGTTCTCGGTTCGGCGGCCGGCGGCGGCGTTCCCCAATGGAATTGCCGCTGTCCGGTGTGCCGCATGGC
CTGGTCGGGAGACCCCCGCGTCACGCCGCGCACCCAGTCCAGCATCGCCGTCTCCGCTGACGGCAGCGATTGGGTCCTGC
TCAACGCCTCGCCCGACCTTCGGGCGCAGATTTCAGCTACGCCCGCGCTCAAGCCGCGCATGGGCGAGCGCGACAGCCCC
ATTCGCGCGGTCGTCCTCACCAACGGGGACGTGGACCACATCGCCGGCCTGCTCTCGCTCCGGGAATCCCAGCCTTTCGC
CCTCTTCGGCACGGCCGAGACGCTGGGGCTGCTGAAGGAGAACCAGGTGTTCGACGTGGTGGCGCCAGCCTTCGTCAGCC
GCACCGCCGCCGAGTTCGGTCGTCCCTTTTCTCCGGTGCCGGGGCTGACCATGGAATTCTTCACCGTGCCCGGAAAGGTG
CCGCTGTGGCGGGAGGACGCCAGCCTCGTCATCGGCGAGGAGACCGGCTCCACCGTGGGTGTCACCATCACCTGCGCCGA
CAAGCGCCTCGTCTATATTCCCGGCTGCGCGGCGGTGACGCCGGCGGTGCGCGAGCGCATCGTCGGGGCCGATCTGCTGT
TCTTCGACGGCACGCTCTATCGCGACGACGAGATGATCGAGGCCGGCGTCGGCACCAAGACCGGCGCGCGCATGGGGCAC
CTCTCCATGTCGGGCGACGGCGGCACCGTGGCGCTGCTCAAGGACGTGCCGGTGGCGAGGCGTGTCTTCATCCACATCAA
CAACACCAACCCGGCGCTGGTGGATGGCTCGCAGGAGCGCCACGCCGTGGAGCAGGCCGGCTGGACGGTGGCCCGCGACG
GAATGGAGTTCTCGTTATGA

Upstream 100 bases:

>100_bases
GTCTGCGTGGGCATGGAAGTCACCGCTTATCTGCCGGCCGATTTCTGATCCGAATGAGGTCGGTGGCCGGGAGCGATAAG
GCAGGAGCGTTCGACGCATC

Downstream 100 bases:

>100_bases
CCTTCCTCGCCCTTGCCGAGCCGCTGGTCTTCCCGCCCCTGCCCGCGCCGTCCGAGCCGCTGTCGCCCGAAGGGCTGGAA
GCGGCGCTGCGGGAGGTGGG

Product: pyrroloquinoline quinone biosynthesis protein PqqB

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein B [H]

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MQVIVLGSAAGGGVPQWNCRCPVCRMAWSGDPRVTPRTQSSIAVSADGSDWVLLNASPDLRAQISATPALKPRMGERDSP
IRAVVLTNGDVDHIAGLLSLRESQPFALFGTAETLGLLKENQVFDVVAPAFVSRTAAEFGRPFSPVPGLTMEFFTVPGKV
PLWREDASLVIGEETGSTVGVTITCADKRLVYIPGCAAVTPAVRERIVGADLLFFDGTLYRDDEMIEAGVGTKTGARMGH
LSMSGDGGTVALLKDVPVARRVFIHINNTNPALVDGSQERHAVEQAGWTVARDGMEFSL

Sequences:

>Translated_299_residues
MQVIVLGSAAGGGVPQWNCRCPVCRMAWSGDPRVTPRTQSSIAVSADGSDWVLLNASPDLRAQISATPALKPRMGERDSP
IRAVVLTNGDVDHIAGLLSLRESQPFALFGTAETLGLLKENQVFDVVAPAFVSRTAAEFGRPFSPVPGLTMEFFTVPGKV
PLWREDASLVIGEETGSTVGVTITCADKRLVYIPGCAAVTPAVRERIVGADLLFFDGTLYRDDEMIEAGVGTKTGARMGH
LSMSGDGGTVALLKDVPVARRVFIHINNTNPALVDGSQERHAVEQAGWTVARDGMEFSL
>Mature_299_residues
MQVIVLGSAAGGGVPQWNCRCPVCRMAWSGDPRVTPRTQSSIAVSADGSDWVLLNASPDLRAQISATPALKPRMGERDSP
IRAVVLTNGDVDHIAGLLSLRESQPFALFGTAETLGLLKENQVFDVVAPAFVSRTAAEFGRPFSPVPGLTMEFFTVPGKV
PLWREDASLVIGEETGSTVGVTITCADKRLVYIPGCAAVTPAVRERIVGADLLFFDGTLYRDDEMIEAGVGTKTGARMGH
LSMSGDGGTVALLKDVPVARRVFIHINNTNPALVDGSQERHAVEQAGWTVARDGMEFSL

Specific function: May be involved in the transport of PQQ or its precursor to the periplasm [H]

COG id: COG1235

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqqB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011842 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31833; Mature: 31833

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVIVLGSAAGGGVPQWNCRCPVCRMAWSGDPRVTPRTQSSIAVSADGSDWVLLNASPDL
CEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEECCCCC
RAQISATPALKPRMGERDSPIRAVVLTNGDVDHIAGLLSLRESQPFALFGTAETLGLLKE
EEEEECCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECHHHHHHHCC
NQVFDVVAPAFVSRTAAEFGRPFSPVPGLTMEFFTVPGKVPLWREDASLVIGEETGSTVG
CCEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEECCCCEEEECCCCCEEE
VTITCADKRLVYIPGCAAVTPAVRERIVGADLLFFDGTLYRDDEMIEAGVGTKTGARMGH
EEEEECCCEEEEECCCHHCCHHHHHHHCCCEEEEECCEEECCCHHHCCCCCCCCCCEEEE
LSMSGDGGTVALLKDVPVARRVFIHINNTNPALVDGSQERHAVEQAGWTVARDGMEFSL
EEECCCCCEEEEEECCCCEEEEEEEECCCCCEEECCCHHHHHHHHCCCEEEECCEEECC
>Mature Secondary Structure
MQVIVLGSAAGGGVPQWNCRCPVCRMAWSGDPRVTPRTQSSIAVSADGSDWVLLNASPDL
CEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEECCCCC
RAQISATPALKPRMGERDSPIRAVVLTNGDVDHIAGLLSLRESQPFALFGTAETLGLLKE
EEEEECCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECHHHHHHHCC
NQVFDVVAPAFVSRTAAEFGRPFSPVPGLTMEFFTVPGKVPLWREDASLVIGEETGSTVG
CCEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEECCCCEEEECCCCCEEE
VTITCADKRLVYIPGCAAVTPAVRERIVGADLLFFDGTLYRDDEMIEAGVGTKTGARMGH
EEEEECCCEEEEECCCHHCCHHHHHHHCCCEEEEECCEEECCCHHHCCCCCCCCCCEEEE
LSMSGDGGTVALLKDVPVARRVFIHINNTNPALVDGSQERHAVEQAGWTVARDGMEFSL
EEECCCCCEEEEEECCCCEEEEEEEECCCCCEEECCCHHHHHHHHCCCEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA