| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154245740
Identifier: 154245740
GI number: 154245740
Start: 2025220
End: 2026542
Strand: Reverse
Name: 154245740
Synonym: Xaut_1796
Alternate gene names: NA
Gene position: 2026542-2025220 (Counterclockwise)
Preceding gene: 154245741
Following gene: 154245739
Centisome position: 38.17
GC content: 71.58
Gene sequence:
>1323_bases ATGACATCGGGAGATTTGATCACCGGCGGTGCCCCGCGCACCGTCCGAGACATCGTCTGCGGCTTCTGTGGCCTTGGCTG CGATGACCTGGAAGTGACGGTCGCCGGCCGTGCCATCACGCCGCGCACCGCATGCCCTGAAGCTGCGCGGCTCCTGACTC GCAGCGACGCGACGCCGCCGTCGCCGCGCGTCAATGGCGTCGCGGCCAGCTTCGAGGAAGCCGCCGCCGCCGTCGCGACG CACCTCAAGGCCGCCCGTTCCGCCGCCTTCAGCGGCCTGGGCGCGGACCTCGAAGGCCTGCGCCGGCTGTACGACCTCGC CATGGCCTCTGGCGCCAGCCTCGATCATGCGGCGTCCGGCGGCCTGTTCGCCAATCTCGAACGCCTTGCCCGCAAGGGCT GGATCGCCGCCACCCTCGCCGAGGTGCGCAACCGCTGCGACGTGCTGGTGGTGTTCGGCGACGACCCGGCCTCTGCCTTC AGCCGCTTCTTCTCCCGCGCCGTCCCGGTGCGCGGGGAGGGGGCGGATGGCGATGCCGCGCCGCTCTTCGTCACCGCCCC CGGCCGGCGGCAGATCGCCGTCGTCGGCGGGCCGCTGTCGGAGGCGTCGCGCCGGGTGCTGGCCGCCCATGAGGTGACGG AAATTGCCGTTGCCGAACAGGATGTTGCCACTGCCGCTTCCGTGCTGACGGCGCTGGTCGCCGGGCGTGGGGTGGACGGA CTCGCCGGCCTTCCGGACGAGACCGTCGCGGCGCTCGCCGCGCTGGCGGAACAGCTCAAGGCGGCGCGCTACGCCGTCTT CACCTGGAACGCCGCCAGCCTGCCGGCGGCGGATGCGCCGGTGGTTGCCGGAGCGGCGTCGGAGGCGGTAGATCTGCTCT CCGTCACCACCCGCGCGGCGGTGTTTCCCTTGGGCGGCCGGGACAATGTGACCGGCGCGCACCAGCTCGCCCTGTGGCGC TTCGGCTATCCCCTGCGCACGGCGGTGGGGGCGGGAACATCCCGCCATGTGCCGGAGCTTTATTCAACGGCGGCAGCGCT TTACGATGCCGACCTGCTGCTCCACACCAGTGCCTTCCGCCCCGATGCGCCGCCCGATTTCGACCGCGGGCCGGTGATCG CCATCGCCCATCCCGACACCGTGTTCGCGCGGGAGCCGGAGGTGTTCATCCCGGTGGGCACGCCGGGGGTGGATTACGGC GGCCACGTCTTCCGCATGGATTCGGTGGTTTGCCTTCCGCTTCAGGCCCTTAGGCCTGCCGAACTGCCCAGCGTCGCCGA AGCGGCGGCGGCCATTCTTGTGTCGTTCGGGAGGGGTGCATGA
Upstream 100 bases:
>100_bases TCCTACTTTCACCTCCGCGGGCCACAGTCGGCGCCAGCTGCACGCTGTTGCGTGGGCCTGGCACTGCGCGCCCCGCCACC ATCGCCTTCGGGTGACGCCG
Downstream 100 bases:
>100_bases GGACGCGCATCACCGGTGGGCGCGTGTTCGACCCCGCCAACAATGTCATCGACCAGGTTCGCGACATCCTCTTGGAAGAC GGCCGCATCATCGCCGACGC
Product: formylmethanofuran dehydrogenase
Products: CO2; methanofuran; reduced acceptor
Alternate protein names: Formylmethanofuran Dehydrogenase Subunit B
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MTSGDLITGGAPRTVRDIVCGFCGLGCDDLEVTVAGRAITPRTACPEAARLLTRSDATPPSPRVNGVAASFEEAAAAVAT HLKAARSAAFSGLGADLEGLRRLYDLAMASGASLDHAASGGLFANLERLARKGWIAATLAEVRNRCDVLVVFGDDPASAF SRFFSRAVPVRGEGADGDAAPLFVTAPGRRQIAVVGGPLSEASRRVLAAHEVTEIAVAEQDVATAASVLTALVAGRGVDG LAGLPDETVAALAALAEQLKAARYAVFTWNAASLPAADAPVVAGAASEAVDLLSVTTRAAVFPLGGRDNVTGAHQLALWR FGYPLRTAVGAGTSRHVPELYSTAAALYDADLLLHTSAFRPDAPPDFDRGPVIAIAHPDTVFAREPEVFIPVGTPGVDYG GHVFRMDSVVCLPLQALRPAELPSVAEAAAAILVSFGRGA
Sequences:
>Translated_440_residues MTSGDLITGGAPRTVRDIVCGFCGLGCDDLEVTVAGRAITPRTACPEAARLLTRSDATPPSPRVNGVAASFEEAAAAVAT HLKAARSAAFSGLGADLEGLRRLYDLAMASGASLDHAASGGLFANLERLARKGWIAATLAEVRNRCDVLVVFGDDPASAF SRFFSRAVPVRGEGADGDAAPLFVTAPGRRQIAVVGGPLSEASRRVLAAHEVTEIAVAEQDVATAASVLTALVAGRGVDG LAGLPDETVAALAALAEQLKAARYAVFTWNAASLPAADAPVVAGAASEAVDLLSVTTRAAVFPLGGRDNVTGAHQLALWR FGYPLRTAVGAGTSRHVPELYSTAAALYDADLLLHTSAFRPDAPPDFDRGPVIAIAHPDTVFAREPEVFIPVGTPGVDYG GHVFRMDSVVCLPLQALRPAELPSVAEAAAAILVSFGRGA >Mature_439_residues TSGDLITGGAPRTVRDIVCGFCGLGCDDLEVTVAGRAITPRTACPEAARLLTRSDATPPSPRVNGVAASFEEAAAAVATH LKAARSAAFSGLGADLEGLRRLYDLAMASGASLDHAASGGLFANLERLARKGWIAATLAEVRNRCDVLVVFGDDPASAFS RFFSRAVPVRGEGADGDAAPLFVTAPGRRQIAVVGGPLSEASRRVLAAHEVTEIAVAEQDVATAASVLTALVAGRGVDGL AGLPDETVAALAALAEQLKAARYAVFTWNAASLPAADAPVVAGAASEAVDLLSVTTRAAVFPLGGRDNVTGAHQLALWRF GYPLRTAVGAGTSRHVPELYSTAAALYDADLLLHTSAFRPDAPPDFDRGPVIAIAHPDTVFAREPEVFIPVGTPGVDYGG HVFRMDSVVCLPLQALRPAELPSVAEAAAAILVSFGRGA
Specific function: Unknown
COG id: COG1029
COG function: function code C; Formylmethanofuran dehydrogenase subunit B
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.2.99.5
Molecular weight: Translated: 45158; Mature: 45026
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSGDLITGGAPRTVRDIVCGFCGLGCDDLEVTVAGRAITPRTACPEAARLLTRSDATPP CCCCCEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCEECCCCCCHHHHHHHHHCCCCCC SPRVNGVAASFEEAAAAVATHLKAARSAAFSGLGADLEGLRRLYDLAMASGASLDHAASG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHCCC GLFANLERLARKGWIAATLAEVRNRCDVLVVFGDDPASAFSRFFSRAVPVRGEGADGDAA CHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCC PLFVTAPGRRQIAVVGGPLSEASRRVLAAHEVTEIAVAEQDVATAASVLTALVAGRGVDG CEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LAGLPDETVAALAALAEQLKAARYAVFTWNAASLPAADAPVVAGAASEAVDLLSVTTRAA CCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHE VFPLGGRDNVTGAHQLALWRFGYPLRTAVGAGTSRHVPELYSTAAALYDADLLLHTSAFR EEECCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEECCCC PDAPPDFDRGPVIAIAHPDTVFAREPEVFIPVGTPGVDYGGHVFRMDSVVCLPLQALRPA CCCCCCCCCCCEEEEECCCCEEECCCCEEEECCCCCCCCCCEEEEECCEEEECHHHCCCC ELPSVAEAAAAILVSFGRGA CCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure TSGDLITGGAPRTVRDIVCGFCGLGCDDLEVTVAGRAITPRTACPEAARLLTRSDATPP CCCCEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCEECCCCCCHHHHHHHHHCCCCCC SPRVNGVAASFEEAAAAVATHLKAARSAAFSGLGADLEGLRRLYDLAMASGASLDHAASG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHCCC GLFANLERLARKGWIAATLAEVRNRCDVLVVFGDDPASAFSRFFSRAVPVRGEGADGDAA CHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCC PLFVTAPGRRQIAVVGGPLSEASRRVLAAHEVTEIAVAEQDVATAASVLTALVAGRGVDG CEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LAGLPDETVAALAALAEQLKAARYAVFTWNAASLPAADAPVVAGAASEAVDLLSVTTRAA CCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHE VFPLGGRDNVTGAHQLALWRFGYPLRTAVGAGTSRHVPELYSTAAALYDADLLLHTSAFR EEECCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEECCCC PDAPPDFDRGPVIAIAHPDTVFAREPEVFIPVGTPGVDYGGHVFRMDSVVCLPLQALRPA CCCCCCCCCCCEEEEECCCCEEECCCCEEEECCCCCCCCCCEEEEECCEEEECHHHCCCC ELPSVAEAAAAILVSFGRGA CCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: formylmethanofuran; H2O; acceptor
Specific reaction: formylmethanofuran + H2O + acceptor = CO2 + methanofuran + reduced acceptor
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA