| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is fwdA [H]
Identifier: 154245739
GI number: 154245739
Start: 2023574
End: 2025223
Strand: Reverse
Name: fwdA [H]
Synonym: Xaut_1795
Alternate gene names: 154245739
Gene position: 2025223-2023574 (Counterclockwise)
Preceding gene: 154245740
Following gene: 154245738
Centisome position: 38.15
GC content: 65.82
Gene sequence:
>1650_bases ATGAGGACGCGCATCACCGGTGGGCGCGTGTTCGACCCCGCCAACAATGTCATCGACCAGGTTCGCGACATCCTCTTGGA AGACGGCCGCATCATCGCCGACGCGCCGCCGGCCAATGGTGAGCAAGTCGTTGATGCGAAGGGCACAATCGTGCTTGCGG GCGGCATCGACCTGCATAGCCATATCGCCGGCGGCAAGGTCAATCTGGGCCGCCTGCTGATGAACGAGGACCGGGCGCTC TATCCCGAGCCGTTCGGCGATTTCTGCGGCTGCGGCGGCGGGCGGGCGGCGCCCACCACCCACGCAACTGGTTGCCGCTA CTCGCAAATGGGCTACACCGCCGTGTTCGAGCCGGCGGTGGTGGGGGCCAATGCCCGCCACGCGCACCTGGAGATGGCGG ACATCCCCAATATCGACACCGGCGGCTTCCTGGTGCTGGGGAATGACGATTTCCTGTTGCGCCTCATCGCTCAGGGCGAG GGCCAGCAGGCCATCAACGACTATGTGGCCTGGATGCTCAAGGCCACCCAGTGCTGCGCCATCAAGATCGTGAACCCCGG CGGTATCAACGCCTTCAAGTTCAACGGGCGTGCCCTCGATCTTGACGAGACCGGGCCGTTTTACGGCCTCACCCCGCGCC GAGTTCTGAACACACTTCAGCGCGCCGTATCGGAATTGGGGGTGCCGCACCCCATCCACCTCCATGGCTGCAACCTCGGG GTGCCTGGCAACGTCAAGACGACGCTTGCCACCATCGGCGCGACCGAGGGCTTCCCGCTCCACCTCACCCACATCCAGTT CCACTCCTACGGCACCGAGGGCGACCGGCACTTCTCCTCCGGCTCGGCCGAGATCGCGGAGGCGGTGAACGCCAATCCGC ACATTTCGGTGGACGTGGGCCAGATCATGTTCGGCCAGACGGTGACCGCCTCGGCCGACCTCATGTCCCAGTATCGCAAC CACGGCATTGCCGATCCCAAGAAGTGGATCGGCATGGACATCGAGATGGATGCCGCCTGCGGGGTGGTGCCGTTCAATTA TCGCGACACCTCCTTCGTGAACGCGCTGCAATGGGCCATCGGGCTGGAATTGTTCCTGCTCATCGAGGACCCGTGGCGGG TGTATCTGACCACCGACCATCCCAATGGCGGTCCCTTCACCTCCTACCCGCACCTCATCCGCCTGCTGATGGACAAGCCG TTCCGCGACGACCATCTCTCGCGCATCCACAAGGCGGCGCGCGCGCACACCAGGCTTGCCGAGATTTCCCGCGAATACAC GCTGGAGGAGATCGCGGTGGTGACCCGCGCTGCCCCGGCCCGCACCCTGGGCCTGAAGGATCGTGGCCATCTCGGCCCCG GCGCCCGCGCGGACGTCGTGCTCTATGAGGAGCAGGCCGACCGCGAGGCCATGTTCGCCGCCCCGCGCCTTGTCATGAAG GACGGCGAGGTGGTGGTGGTGAACGGCGAGGTGGTGGCCCTCACGCAGGGGCGCACCTATGCGGTGCATCCGCCATCGGA CCCGCTCATGGACAAGCGGCTGGAGCGCTGGTTCGACGAGGCGGTGGGCCTGAAGGCCAGCCACTACAAGATCGCCGACG GCGAGATCCGCGACGGCCAGGGCCCCGAAATCGTGGAGCTGACGCCATGA
Upstream 100 bases:
>100_bases ATTCGGTGGTTTGCCTTCCGCTTCAGGCCCTTAGGCCTGCCGAACTGCCCAGCGTCGCCGAAGCGGCGGCGGCCATTCTT GTGTCGTTCGGGAGGGGTGC
Downstream 100 bases:
>100_bases CTTCCCAAGCCCCCATGATCATCAACGGCGTCGAGATCCGCGACAGCTTCGCCGAGGCGTTCCCCATGGCGGGAACGCGC CTCATCATAACCGCCGATAC
Product: amidohydrolase 3
Products: CO2; methanofuran; reduced acceptor
Alternate protein names: NA
Number of amino acids: Translated: 549; Mature: 549
Protein sequence:
>549_residues MRTRITGGRVFDPANNVIDQVRDILLEDGRIIADAPPANGEQVVDAKGTIVLAGGIDLHSHIAGGKVNLGRLLMNEDRAL YPEPFGDFCGCGGGRAAPTTHATGCRYSQMGYTAVFEPAVVGANARHAHLEMADIPNIDTGGFLVLGNDDFLLRLIAQGE GQQAINDYVAWMLKATQCCAIKIVNPGGINAFKFNGRALDLDETGPFYGLTPRRVLNTLQRAVSELGVPHPIHLHGCNLG VPGNVKTTLATIGATEGFPLHLTHIQFHSYGTEGDRHFSSGSAEIAEAVNANPHISVDVGQIMFGQTVTASADLMSQYRN HGIADPKKWIGMDIEMDAACGVVPFNYRDTSFVNALQWAIGLELFLLIEDPWRVYLTTDHPNGGPFTSYPHLIRLLMDKP FRDDHLSRIHKAARAHTRLAEISREYTLEEIAVVTRAAPARTLGLKDRGHLGPGARADVVLYEEQADREAMFAAPRLVMK DGEVVVVNGEVVALTQGRTYAVHPPSDPLMDKRLERWFDEAVGLKASHYKIADGEIRDGQGPEIVELTP
Sequences:
>Translated_549_residues MRTRITGGRVFDPANNVIDQVRDILLEDGRIIADAPPANGEQVVDAKGTIVLAGGIDLHSHIAGGKVNLGRLLMNEDRAL YPEPFGDFCGCGGGRAAPTTHATGCRYSQMGYTAVFEPAVVGANARHAHLEMADIPNIDTGGFLVLGNDDFLLRLIAQGE GQQAINDYVAWMLKATQCCAIKIVNPGGINAFKFNGRALDLDETGPFYGLTPRRVLNTLQRAVSELGVPHPIHLHGCNLG VPGNVKTTLATIGATEGFPLHLTHIQFHSYGTEGDRHFSSGSAEIAEAVNANPHISVDVGQIMFGQTVTASADLMSQYRN HGIADPKKWIGMDIEMDAACGVVPFNYRDTSFVNALQWAIGLELFLLIEDPWRVYLTTDHPNGGPFTSYPHLIRLLMDKP FRDDHLSRIHKAARAHTRLAEISREYTLEEIAVVTRAAPARTLGLKDRGHLGPGARADVVLYEEQADREAMFAAPRLVMK DGEVVVVNGEVVALTQGRTYAVHPPSDPLMDKRLERWFDEAVGLKASHYKIADGEIRDGQGPEIVELTP >Mature_549_residues MRTRITGGRVFDPANNVIDQVRDILLEDGRIIADAPPANGEQVVDAKGTIVLAGGIDLHSHIAGGKVNLGRLLMNEDRAL YPEPFGDFCGCGGGRAAPTTHATGCRYSQMGYTAVFEPAVVGANARHAHLEMADIPNIDTGGFLVLGNDDFLLRLIAQGE GQQAINDYVAWMLKATQCCAIKIVNPGGINAFKFNGRALDLDETGPFYGLTPRRVLNTLQRAVSELGVPHPIHLHGCNLG VPGNVKTTLATIGATEGFPLHLTHIQFHSYGTEGDRHFSSGSAEIAEAVNANPHISVDVGQIMFGQTVTASADLMSQYRN HGIADPKKWIGMDIEMDAACGVVPFNYRDTSFVNALQWAIGLELFLLIEDPWRVYLTTDHPNGGPFTSYPHLIRLLMDKP FRDDHLSRIHKAARAHTRLAEISREYTLEEIAVVTRAAPARTLGLKDRGHLGPGARADVVLYEEQADREAMFAAPRLVMK DGEVVVVNGEVVALTQGRTYAVHPPSDPLMDKRLERWFDEAVGLKASHYKIADGEIRDGQGPEIVELTP
Specific function: Unknown
COG id: COG1229
COG function: function code C; Formylmethanofuran dehydrogenase subunit A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013108 - InterPro: IPR012027 - InterPro: IPR011059 [H]
Pfam domain/function: PF07969 Amidohydro_3 [H]
EC number: 1.2.99.5
Molecular weight: Translated: 59733; Mature: 59733
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS01070 NUCLEASE_NON_SPEC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTRITGGRVFDPANNVIDQVRDILLEDGRIIADAPPANGEQVVDAKGTIVLAGGIDLHS CCCCCCCCEEECCHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEECCCCEEEECCCCHHH HIAGGKVNLGRLLMNEDRALYPEPFGDFCGCGGGRAAPTTHATGCRYSQMGYTAVFEPAV HCCCCCEEECCEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEECCCCCEEEECCEE VGANARHAHLEMADIPNIDTGGFLVLGNDDFLLRLIAQGEGQQAINDYVAWMLKATQCCA ECCCCCEEEEEECCCCCCCCCCEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHCCEEE IKIVNPGGINAFKFNGRALDLDETGPFYGLTPRRVLNTLQRAVSELGVPHPIHLHGCNLG EEEECCCCCEEEEECCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCC VPGNVKTTLATIGATEGFPLHLTHIQFHSYGTEGDRHFSSGSAEIAEAVNANPHISVDVG CCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCEEEEECC QIMFGQTVTASADLMSQYRNHGIADPKKWIGMDIEMDAACGVVPFNYRDTSFVNALQWAI CEEECCEEEHHHHHHHHHHHCCCCCCHHHHCCCEEECCCCCEEECCCCCHHHHHHHHHHH GLELFLLIEDPWRVYLTTDHPNGGPFTSYPHLIRLLMDKPFRDDHLSRIHKAARAHTRLA CEEEEEEEECCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH EISREYTLEEIAVVTRAAPARTLGLKDRGHLGPGARADVVLYEEQADREAMFAAPRLVMK HHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCEEEEE DGEVVVVNGEVVALTQGRTYAVHPPSDPLMDKRLERWFDEAVGLKASHYKIADGEIRDGQ CCCEEEECCEEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCC GPEIVELTP CCEEEEECC >Mature Secondary Structure MRTRITGGRVFDPANNVIDQVRDILLEDGRIIADAPPANGEQVVDAKGTIVLAGGIDLHS CCCCCCCCEEECCHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEECCCCEEEECCCCHHH HIAGGKVNLGRLLMNEDRALYPEPFGDFCGCGGGRAAPTTHATGCRYSQMGYTAVFEPAV HCCCCCEEECCEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEECCCCCEEEECCEE VGANARHAHLEMADIPNIDTGGFLVLGNDDFLLRLIAQGEGQQAINDYVAWMLKATQCCA ECCCCCEEEEEECCCCCCCCCCEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHCCEEE IKIVNPGGINAFKFNGRALDLDETGPFYGLTPRRVLNTLQRAVSELGVPHPIHLHGCNLG EEEECCCCCEEEEECCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCC VPGNVKTTLATIGATEGFPLHLTHIQFHSYGTEGDRHFSSGSAEIAEAVNANPHISVDVG CCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCEEEEECC QIMFGQTVTASADLMSQYRNHGIADPKKWIGMDIEMDAACGVVPFNYRDTSFVNALQWAI CEEECCEEEHHHHHHHHHHHCCCCCCHHHHCCCEEECCCCCEEECCCCCHHHHHHHHHHH GLELFLLIEDPWRVYLTTDHPNGGPFTSYPHLIRLLMDKPFRDDHLSRIHKAARAHTRLA CEEEEEEEECCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH EISREYTLEEIAVVTRAAPARTLGLKDRGHLGPGARADVVLYEEQADREAMFAAPRLVMK HHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCEEEEE DGEVVVVNGEVVALTQGRTYAVHPPSDPLMDKRLERWFDEAVGLKASHYKIADGEIRDGQ CCCEEEECCEEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCC GPEIVELTP CCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: formylmethanofuran; H2O; acceptor
Specific reaction: formylmethanofuran + H2O + acceptor = CO2 + methanofuran + reduced acceptor
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]