| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is otsB [H]
Identifier: 154245666
GI number: 154245666
Start: 1937701
End: 1938528
Strand: Reverse
Name: otsB [H]
Synonym: Xaut_1722
Alternate gene names: 154245666
Gene position: 1938528-1937701 (Counterclockwise)
Preceding gene: 154245669
Following gene: 154245665
Centisome position: 36.51
GC content: 71.98
Gene sequence:
>828_bases GTGCTGACCCAACTGCACCCGTCCGCGACCCGTGAAGCTTCGGCCGGACAGGCGTTCGAGGGGCACCGGCCCGACGCGCC GTTCCCGGCGGCCTGCGCGGGCGTACGCGCCGACACCCATGCTTTCTTCCTCGACGTGGACGGCAGCCTGATCGACATCG CGGACCACCCCGACGCCGTGGAGGTTCCCGAGGATCTCCCGCAGCTTCTGGCCGCGCTGGCGGAGCAGGCCGACGGCGCG CTGGCCCTCGTCAGCGGGCGGACCATCCAGGCCCTCGACATTCTGCTGCACCCGTTCGGCTTCGCGGCGGCGGGTAGCCA TGGCGCCCAGATGCGGCTTGAGCCCGACGGCAGGATCCTCTCCGCGCCGGCGCTGGACACCGCGCTTGCCGACGCGGTGA AAGAGGTGGCGGACGGGTTCGACGGCGTGTTCGCCGAGGACAAGGGCACCGCCATCGCGGTTCATTACCGTGCCGTGCCC GATGCTGCGCCCTCCCTCAGGCGCGCGCTGCTGGAGCTCCTCCGCGCGCGGCAGGATGTGCGCCTGATGCCTGGCCATTG CGTGTTCGAGGTGAAGCCCGCCAGCCTCGACAAGGGCACGGCGGTGGCGGATTTCATGGCCCGCGCCCCGTTTGCCGGGC GTGTTCCCGTCTTCATCGGCGACGATGTCACCGACGAGGCCGGTTTTGGCGCCGTCGCCGCGCGCGGGGGCCTTGCCCTT GCGGTCGGTTCGCCGCGACCGGGCACCCAGGGGGTGCTTGCCGATCCCCGGTCGGTCCGGGCTTTCCTCACCCACCTCGC GGCGGTGCCGCAGCAACGACGGAGGTGA
Upstream 100 bases:
>100_bases GCAGCTTGCGCAGGCATGGCGGCATTGCGTCAAACATGCGGGGGAACCATGGCGAGGGCTTGAGCGTTGAGATGACTGTA ATGGGATAAGGAGATGGTTT
Downstream 100 bases:
>100_bases CCCTCGTGTCTCGCATCGTGGTCGTATCCAATCGTGTGGCGGTCCCCCAGCGCTCGGGGGTCACGGCCGGCGGACTGGCG GTGGCGGTCAACGCCGCGCT
Product: HAD family hydrolase
Products: NA
Alternate protein names: TPP; Trehalose 6-phosphate phosphatase; Trehalose-phosphatase [H]
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MLTQLHPSATREASAGQAFEGHRPDAPFPAACAGVRADTHAFFLDVDGSLIDIADHPDAVEVPEDLPQLLAALAEQADGA LALVSGRTIQALDILLHPFGFAAAGSHGAQMRLEPDGRILSAPALDTALADAVKEVADGFDGVFAEDKGTAIAVHYRAVP DAAPSLRRALLELLRARQDVRLMPGHCVFEVKPASLDKGTAVADFMARAPFAGRVPVFIGDDVTDEAGFGAVAARGGLAL AVGSPRPGTQGVLADPRSVRAFLTHLAAVPQQRRR
Sequences:
>Translated_275_residues MLTQLHPSATREASAGQAFEGHRPDAPFPAACAGVRADTHAFFLDVDGSLIDIADHPDAVEVPEDLPQLLAALAEQADGA LALVSGRTIQALDILLHPFGFAAAGSHGAQMRLEPDGRILSAPALDTALADAVKEVADGFDGVFAEDKGTAIAVHYRAVP DAAPSLRRALLELLRARQDVRLMPGHCVFEVKPASLDKGTAVADFMARAPFAGRVPVFIGDDVTDEAGFGAVAARGGLAL AVGSPRPGTQGVLADPRSVRAFLTHLAAVPQQRRR >Mature_275_residues MLTQLHPSATREASAGQAFEGHRPDAPFPAACAGVRADTHAFFLDVDGSLIDIADHPDAVEVPEDLPQLLAALAEQADGA LALVSGRTIQALDILLHPFGFAAAGSHGAQMRLEPDGRILSAPALDTALADAVKEVADGFDGVFAEDKGTAIAVHYRAVP DAAPSLRRALLELLRARQDVRLMPGHCVFEVKPASLDKGTAVADFMARAPFAGRVPVFIGDDVTDEAGFGAVAARGGLAL AVGSPRPGTQGVLADPRSVRAFLTHLAAVPQQRRR
Specific function: Removes the phosphate from trehalose 6-phosphate to produce free trehalose [H]
COG id: COG1877
COG function: function code G; Trehalose-6-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trehalose phosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1788207, Length=238, Percent_Identity=38.655462184874, Blast_Score=160, Evalue=1e-40, Organism=Drosophila melanogaster, GI19920676, Length=213, Percent_Identity=30.0469483568075, Blast_Score=91, Evalue=9e-19, Organism=Drosophila melanogaster, GI221473368, Length=197, Percent_Identity=29.4416243654822, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI20129307, Length=197, Percent_Identity=29.4416243654822, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24582490, Length=197, Percent_Identity=29.4416243654822, Blast_Score=76, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR003337 [H]
Pfam domain/function: PF02358 Trehalose_PPase [H]
EC number: =3.1.3.12 [H]
Molecular weight: Translated: 28679; Mature: 28679
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTQLHPSATREASAGQAFEGHRPDAPFPAACAGVRADTHAFFLDVDGSLIDIADHPDAV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCEEEECCCCCCC EVPEDLPQLLAALAEQADGALALVSGRTIQALDILLHPFGFAAAGSHGAQMRLEPDGRIL CCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEE SAPALDTALADAVKEVADGFDGVFAEDKGTAIAVHYRAVPDAAPSLRRALLELLRARQDV ECCHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCC RLMPGHCVFEVKPASLDKGTAVADFMARAPFAGRVPVFIGDDVTDEAGFGAVAARGGLAL EECCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCEEEECCCEEE AVGSPRPGTQGVLADPRSVRAFLTHLAAVPQQRRR EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLTQLHPSATREASAGQAFEGHRPDAPFPAACAGVRADTHAFFLDVDGSLIDIADHPDAV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCEEEECCCCCCC EVPEDLPQLLAALAEQADGALALVSGRTIQALDILLHPFGFAAAGSHGAQMRLEPDGRIL CCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEE SAPALDTALADAVKEVADGFDGVFAEDKGTAIAVHYRAVPDAAPSLRRALLELLRARQDV ECCHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCC RLMPGHCVFEVKPASLDKGTAVADFMARAPFAGRVPVFIGDDVTDEAGFGAVAARGGLAL EECCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCEEEECCCEEE AVGSPRPGTQGVLADPRSVRAFLTHLAAVPQQRRR EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]