| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is fae-hps [H]
Identifier: 154245572
GI number: 154245572
Start: 1844929
End: 1845468
Strand: Direct
Name: fae-hps [H]
Synonym: Xaut_1627
Alternate gene names: 154245572
Gene position: 1844929-1845468 (Clockwise)
Preceding gene: 154245569
Following gene: 154245574
Centisome position: 34.75
GC content: 65.0
Gene sequence:
>540_bases ATGACCGACATCTGGTTCAAGGCGGGTGAAGCAACCGTTCTCGCAGCGGAAGGGCAGGCCACCGACGCCATGCCGGAAGT GCTGATCGGCTCCGTGCGCGGCCCGGTGGGGCAGGCGGTCGCCTCCATGATGGGGCAGGTGCAGGGCCACACCCGCATGT TCGTGGTGCGCGACCTGAACCAGCTGGTGCGCCCGCTGACCATGATGACCACCAAGGCCACCATCCACACCGCCGAATAT GTGGACCTGCTCGGCGGCGTGGTGCAGGCCGCCATGGGCGACGCCATCATCGATTGCGTCAGTGAGGGCATCCTGCCCAA GGACGAGGTGGACGAGCTGGCCATGATCATCATGGTGTGGCTCGACCCGCGCTGCGCCGAGGACCCGGACCTCGACAAGG CCGACCTGTATCGCACCAATTACGAGGCGACCAAGCTCGCCATTTCCCGCGCCATCAAGGGCGAGCCGTCCATTGACGAG CTGATCGCCAACCGCAAGAGCGTCAAGCACTACGCCCTGGAAGGGGTGATCGACTACTGA
Upstream 100 bases:
>100_bases TGGACAACGCATCCGGGCACCCTCCGGCGCAGCGACGCTGGGTCGCCGTGGACGGGGCGGCAGCGGGGTGCTTCTGTGCC GTCCCAAACAGGAGGAAAAC
Downstream 100 bases:
>100_bases GGGCAAGGCGCCGTCCGGGGCGGGAGGAGGTGGCTTCCTCTCGCCTCGCCCGGCGGAATGCGCCGGCACGCAAGCGGCGC CCCACTCAGCTGTTACGGCC
Product: formaldehyde-activating protein
Products: NA
Alternate protein names: Formaldehyde-activating enzyme; Fae; 3-hexulose-6-phosphate synthase; HPS; D-arabino-3-hexulose-6-phosphate formaldehyde lyase [H]
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MTDIWFKAGEATVLAAEGQATDAMPEVLIGSVRGPVGQAVASMMGQVQGHTRMFVVRDLNQLVRPLTMMTTKATIHTAEY VDLLGGVVQAAMGDAIIDCVSEGILPKDEVDELAMIIMVWLDPRCAEDPDLDKADLYRTNYEATKLAISRAIKGEPSIDE LIANRKSVKHYALEGVIDY
Sequences:
>Translated_179_residues MTDIWFKAGEATVLAAEGQATDAMPEVLIGSVRGPVGQAVASMMGQVQGHTRMFVVRDLNQLVRPLTMMTTKATIHTAEY VDLLGGVVQAAMGDAIIDCVSEGILPKDEVDELAMIIMVWLDPRCAEDPDLDKADLYRTNYEATKLAISRAIKGEPSIDE LIANRKSVKHYALEGVIDY >Mature_178_residues TDIWFKAGEATVLAAEGQATDAMPEVLIGSVRGPVGQAVASMMGQVQGHTRMFVVRDLNQLVRPLTMMTTKATIHTAEYV DLLGGVVQAAMGDAIIDCVSEGILPKDEVDELAMIIMVWLDPRCAEDPDLDKADLYRTNYEATKLAISRAIKGEPSIDEL IANRKSVKHYALEGVIDY
Specific function: Catalyzes the formation of ribulose-5-phosphate and formaldehyde from 3-hexulose-6-phosphate [H]
COG id: COG1795
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the HPS/KGPDC family. HPS subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR020868 - InterPro: IPR014826 - InterPro: IPR001754 - InterPro: IPR020568 - InterPro: IPR011060 [H]
Pfam domain/function: PF08714 Fae; PF00215 OMPdecase [H]
EC number: =4.1.2.43 [H]
Molecular weight: Translated: 19495; Mature: 19364
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIWFKAGEATVLAAEGQATDAMPEVLIGSVRGPVGQAVASMMGQVQGHTRMFVVRDLN CCCCEEECCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHH QLVRPLTMMTTKATIHTAEYVDLLGGVVQAAMGDAIIDCVSEGILPKDEVDELAMIIMVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LDPRCAEDPDLDKADLYRTNYEATKLAISRAIKGEPSIDELIANRKSVKHYALEGVIDY CCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDIWFKAGEATVLAAEGQATDAMPEVLIGSVRGPVGQAVASMMGQVQGHTRMFVVRDLN CCCEEECCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHH QLVRPLTMMTTKATIHTAEYVDLLGGVVQAAMGDAIIDCVSEGILPKDEVDELAMIIMVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LDPRCAEDPDLDKADLYRTNYEATKLAISRAIKGEPSIDELIANRKSVKHYALEGVIDY CCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]