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The map label for this gene is glcD [H]

Identifier: 154245559

GI number: 154245559

Start: 1827398

End: 1828786

Strand: Reverse

Name: glcD [H]

Synonym: Xaut_1614

Alternate gene names: 154245559

Gene position: 1828786-1827398 (Counterclockwise)

Preceding gene: 154245560

Following gene: 154245558

Centisome position: 34.45

GC content: 70.34

Gene sequence:

>1389_bases
ATGAGCGCCGATCTTGTTTCCCGCCTTGCCGCCATTCTCGGCCCCTCCGGCCTCCTCGCCGACGAGGCCGACATGGCCTC
CTATGCCATCGACTGGCGCCGCCTGTTTCCCGGCCGCCCGCTGTGCGTCGCCCGCCCCGCCTCCACCGCCGAGGTGTCCG
AGGTGGTGAAGGCCTGCCGCGCGGCCGGCGCCGCCATCGTGCCCCAGGGCGGCAATACCGGCCTTGCCGGCGGCGCGGTG
CCGGACGCCTCGGGCGGACAGGTGGTGCTCTCCCTCACCCGCATGAACAAGGTGCGCGCCGTCGACCCGGTGGGCCTCAC
CATCTCCGCCGATGCCGGCTGCATCCTCAAGGTGGCGCAGGACGCCGCCGCCGAGGCCGGCCGTCTGCTGCCCATAAGCC
TTGCGGCGGAAGGCTCGGCGACCTTGGGCGGGGTGGTCTCCACCAATGCGGGCGGGGTCAATGTGGTGCGCTACGGCATG
GCCCGCGCACTGGTGCTGGGCCTTGAGGTGGTGCTCGCCGACGGTACCATCGTGGACATGGCCCGCCAGCTCCGCAAGGA
CAACGCCGGCTACGACCTCAAACAGCTCTTCATCGGCACCGAGGGCACGCTGGGCATCGTCACCGGCGCCGTGCTGCGCC
TGGTGCCCCGGCCCCGCCATACTGTCACCGCCCTGCTCTCCGTGCCCAGCCCCCAGGCGGCCCTGGACCTGCTGGCGCTG
GCGCAGGAGGAACTGGGCGACACCCTCTCTGCCTTCGAGCTGATGAGCGGCTATTCCTTCGACCTGCTGAAGCGGCACCT
CAACCTCACCCCGCCCATCGCCTCCGGCGACTGGTTCGTGCTGCTGGAGGCCGGTGCCAGCCTATCCGGCCTGAGGGAGG
CCGCGGAGGCGGCATTGGCAGCGGCGCTGGAGAACGGCACGGCGCTGGACGGCGTCATCGCCGAGACCGGGGCGCAGGCC
ACCCAGCTCTGGGCCTTGCGCGAGCACATCACCGATGGCGAGGCCCGCGAGGGCAAGAGCATGAAGCACGATGTCTCCGT
GCCCATCGTCGATGTTCCTGCCTTCCTGGAGGCCGCGGACATCGCCATCGAGAACGGCGCACCGGGCGCAAAGGTCAATG
CTTTCGGGCACTTGGGCGACGGCAACATCCATTACAACGTGGTGCTCGCCCCGGGCCAGGACGGCGCCGCCATCAACACC
CTCGTCCATGACGTGGTGGCCCGTTTTGCCGGCTCTATTTCCGCCGAACACGGCATCGGCCAGTACCGGGTGGACGAGCT
TCTCCTGCGCCGCGCACCGGCGGAGATCGCCCTCGCCCGCACCCTCAAGACCGCCCTCGACCCGGACGATTTCCTGAACC
CCGGAAAGGTCCTGCCAGCCGGGGGCTGA

Upstream 100 bases:

>100_bases
GTGCGCGGCCAACGGATGCATCCGCTTCGCCACCGCGCGGGCGGGGCCATCCGGCTGAAGCTCGCACCCGTTTCATGCCA
GATGTCTTGAGGGCTGCCTC

Downstream 100 bases:

>100_bases
TCCCCCGGCCGCACAAAAAGGTACGCTGGAACAAGGCCATGGACAGCTTCGACTATATCGTCGTGGGAGGCGGAACCGCA
GGCGCGATCCTCGCGGCCCG

Product: FAD linked oxidase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 461

Protein sequence:

>462_residues
MSADLVSRLAAILGPSGLLADEADMASYAIDWRRLFPGRPLCVARPASTAEVSEVVKACRAAGAAIVPQGGNTGLAGGAV
PDASGGQVVLSLTRMNKVRAVDPVGLTISADAGCILKVAQDAAAEAGRLLPISLAAEGSATLGGVVSTNAGGVNVVRYGM
ARALVLGLEVVLADGTIVDMARQLRKDNAGYDLKQLFIGTEGTLGIVTGAVLRLVPRPRHTVTALLSVPSPQAALDLLAL
AQEELGDTLSAFELMSGYSFDLLKRHLNLTPPIASGDWFVLLEAGASLSGLREAAEAALAAALENGTALDGVIAETGAQA
TQLWALREHITDGEAREGKSMKHDVSVPIVDVPAFLEAADIAIENGAPGAKVNAFGHLGDGNIHYNVVLAPGQDGAAINT
LVHDVVARFAGSISAEHGIGQYRVDELLLRRAPAEIALARTLKTALDPDDFLNPGKVLPAGG

Sequences:

>Translated_462_residues
MSADLVSRLAAILGPSGLLADEADMASYAIDWRRLFPGRPLCVARPASTAEVSEVVKACRAAGAAIVPQGGNTGLAGGAV
PDASGGQVVLSLTRMNKVRAVDPVGLTISADAGCILKVAQDAAAEAGRLLPISLAAEGSATLGGVVSTNAGGVNVVRYGM
ARALVLGLEVVLADGTIVDMARQLRKDNAGYDLKQLFIGTEGTLGIVTGAVLRLVPRPRHTVTALLSVPSPQAALDLLAL
AQEELGDTLSAFELMSGYSFDLLKRHLNLTPPIASGDWFVLLEAGASLSGLREAAEAALAAALENGTALDGVIAETGAQA
TQLWALREHITDGEAREGKSMKHDVSVPIVDVPAFLEAADIAIENGAPGAKVNAFGHLGDGNIHYNVVLAPGQDGAAINT
LVHDVVARFAGSISAEHGIGQYRVDELLLRRAPAEIALARTLKTALDPDDFLNPGKVLPAGG
>Mature_461_residues
SADLVSRLAAILGPSGLLADEADMASYAIDWRRLFPGRPLCVARPASTAEVSEVVKACRAAGAAIVPQGGNTGLAGGAVP
DASGGQVVLSLTRMNKVRAVDPVGLTISADAGCILKVAQDAAAEAGRLLPISLAAEGSATLGGVVSTNAGGVNVVRYGMA
RALVLGLEVVLADGTIVDMARQLRKDNAGYDLKQLFIGTEGTLGIVTGAVLRLVPRPRHTVTALLSVPSPQAALDLLALA
QEELGDTLSAFELMSGYSFDLLKRHLNLTPPIASGDWFVLLEAGASLSGLREAAEAALAAALENGTALDGVIAETGAQAT
QLWALREHITDGEAREGKSMKHDVSVPIVDVPAFLEAADIAIENGAPGAKVNAFGHLGDGNIHYNVVLAPGQDGAAINTL
VHDVVARFAGSISAEHGIGQYRVDELLLRRAPAEIALARTLKTALDPDDFLNPGKVLPAGG

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=450, Percent_Identity=39.3333333333333, Blast_Score=310, Evalue=2e-84,
Organism=Homo sapiens, GI37595756, Length=472, Percent_Identity=30.7203389830508, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI37595754, Length=495, Percent_Identity=29.2929292929293, Blast_Score=159, Evalue=7e-39,
Organism=Homo sapiens, GI4501993, Length=209, Percent_Identity=27.7511961722488, Blast_Score=78, Evalue=1e-14,
Organism=Escherichia coli, GI1789351, Length=454, Percent_Identity=27.0925110132159, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI48994907, Length=220, Percent_Identity=30.4545454545455, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI48994914, Length=123, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17534361, Length=465, Percent_Identity=34.6236559139785, Blast_Score=278, Evalue=5e-75,
Organism=Caenorhabditis elegans, GI71992373, Length=481, Percent_Identity=30.1455301455301, Blast_Score=160, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI71992381, Length=475, Percent_Identity=29.2631578947368, Blast_Score=149, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI71992392, Length=364, Percent_Identity=31.3186813186813, Blast_Score=132, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI17556096, Length=204, Percent_Identity=25.9803921568627, Blast_Score=80, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6320023, Length=472, Percent_Identity=36.6525423728814, Blast_Score=313, Evalue=4e-86,
Organism=Saccharomyces cerevisiae, GI6320764, Length=471, Percent_Identity=35.6687898089172, Blast_Score=276, Evalue=6e-75,
Organism=Saccharomyces cerevisiae, GI6320027, Length=439, Percent_Identity=28.9293849658314, Blast_Score=162, Evalue=8e-41,
Organism=Drosophila melanogaster, GI18921117, Length=458, Percent_Identity=36.8995633187773, Blast_Score=283, Evalue=2e-76,
Organism=Drosophila melanogaster, GI24639277, Length=458, Percent_Identity=36.8995633187773, Blast_Score=283, Evalue=2e-76,
Organism=Drosophila melanogaster, GI24639275, Length=458, Percent_Identity=36.8995633187773, Blast_Score=283, Evalue=2e-76,
Organism=Drosophila melanogaster, GI24653753, Length=201, Percent_Identity=25.8706467661692, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 47398; Mature: 47267

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSADLVSRLAAILGPSGLLADEADMASYAIDWRRLFPGRPLCVARPASTAEVSEVVKACR
CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHH
AAGAAIVPQGGNTGLAGGAVPDASGGQVVLSLTRMNKVRAVDPVGLTISADAGCILKVAQ
HCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCEEEECCCCEEEHHHH
DAAAEAGRLLPISLAAEGSATLGGVVSTNAGGVNVVRYGMARALVLGLEVVLADGTIVDM
HHHHHCCCEEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHEEECCHHHHH
ARQLRKDNAGYDLKQLFIGTEGTLGIVTGAVLRLVPRPRHTVTALLSVPSPQAALDLLAL
HHHHHHCCCCCCHHHEEECCCCCHHHHHHHHHHHCCCCCHHEEEEEECCCCHHHHHHHHH
AQEELGDTLSAFELMSGYSFDLLKRHLNLTPPIASGDWFVLLEAGASLSGLREAAEAALA
HHHHHCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
AALENGTALDGVIAETGAQATQLWALREHITDGEAREGKSMKHDVSVPIVDVPAFLEAAD
HHHCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCHHHHHHHH
IAIENGAPGAKVNAFGHLGDGNIHYNVVLAPGQDGAAINTLVHDVVARFAGSISAEHGIG
EEEECCCCCCEEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHCCCC
QYRVDELLLRRAPAEIALARTLKTALDPDDFLNPGKVLPAGG
HHHHHHHHHHHCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCC
>Mature Secondary Structure 
SADLVSRLAAILGPSGLLADEADMASYAIDWRRLFPGRPLCVARPASTAEVSEVVKACR
CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHH
AAGAAIVPQGGNTGLAGGAVPDASGGQVVLSLTRMNKVRAVDPVGLTISADAGCILKVAQ
HCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCEEEECCCCEEEHHHH
DAAAEAGRLLPISLAAEGSATLGGVVSTNAGGVNVVRYGMARALVLGLEVVLADGTIVDM
HHHHHCCCEEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHEEECCHHHHH
ARQLRKDNAGYDLKQLFIGTEGTLGIVTGAVLRLVPRPRHTVTALLSVPSPQAALDLLAL
HHHHHHCCCCCCHHHEEECCCCCHHHHHHHHHHHCCCCCHHEEEEEECCCCHHHHHHHHH
AQEELGDTLSAFELMSGYSFDLLKRHLNLTPPIASGDWFVLLEAGASLSGLREAAEAALA
HHHHHCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
AALENGTALDGVIAETGAQATQLWALREHITDGEAREGKSMKHDVSVPIVDVPAFLEAAD
HHHCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCHHHHHHHH
IAIENGAPGAKVNAFGHLGDGNIHYNVVLAPGQDGAAINTLVHDVVARFAGSISAEHGIG
EEEECCCCCCEEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHCCCC
QYRVDELLLRRAPAEIALARTLKTALDPDDFLNPGKVLPAGG
HHHHHHHHHHHCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]