| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154245469
Identifier: 154245469
GI number: 154245469
Start: 1731613
End: 1732443
Strand: Direct
Name: 154245469
Synonym: Xaut_1522
Alternate gene names: NA
Gene position: 1731613-1732443 (Clockwise)
Preceding gene: 154245460
Following gene: 154245470
Centisome position: 32.62
GC content: 64.98
Gene sequence:
>831_bases ATGCGACCCAAAGTCCCGTTTCTCACATGTCTGTGCGCCCTCGCCCTCCTCCTCGCCCCGACTTTCCGGGCCGGCGCCCA GGAGGATGCGAGCGAGAAGGAAATCGAGCGCTACCGCGCCATGATCAACGATCCCATGGCCAATCCGGGCTACCTGGCGG TGGACCGGGGCGAGGCCCTGTGGGCGGAAAAGCGCGGCACGAAAAACGTGTCCCTGGAAAGCTGCGACCTCGGTCTGGGC GCCGGCAAGCTGGAGGGCGCCTATGCCAAACTGCCGCGCTATTTCGCCGATGCCGACAAGGTGATGGACCTGGAACAGCG GCTGCTCTGGTGCATGGACAAGATCCAGGGCCTCGACATCAAGCCCATCATGGCAAAGCCTTTTTCCGGGCCGGGCCGTG GTTCGGACATGGAGGATCTCGTCGCCTTCATCGCCAACAAGTCCAACGGCATGAAGATCGCCGTGCCGCTCGATCATGCC AAAGAGAAGGAGGCCTATGGCATCGGCGAAGCGCTGTTCTTCCGCCGCTCCGCCATCAATGACTTCTCCTGCTCCACCTG CCATGCGGACGCCGGCAAGCGCATCCGCCTGCAGGGCCTGCCGCAACTCGACAAGCCCGGCAAGGACGCGCAGCTGACCA TGGGCTCCTGGCCCACCTACCGGGTCTCCCAGAGCGCGCTGAGAACCATGCAGCACCGCCTGTGGGACTGCTACCGCCAG ATGCGCATGCCGGCCCCGGACTACGCCTCGGAGGCGGTCACGGCGCTCACCGTCTTCCTGAATGCGCAGGCAGCGGGCGG CGAGCTCAACGTTCCGTCCATCAAGCGCTGA
Upstream 100 bases:
>100_bases CGATTGCCTATCACTGGCCGTCGCGGGGCCGAAGGCCGTTGCGTTCCAAGGGCTTCACCAGAAGGCCCGGCGCCTCGGCC CGCCAAGACCGGGAGGATAT
Downstream 100 bases:
>100_bases GGGGGAGAGGCATCATGAAGAAGATACTCATCGCCGCCGCGCTCGTTCTGCCCGGCTTGGCTCATGCCCAGCAGATCCCG CCGGCCTCTCCCGCCGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Diheme Cytochrome C SoxA; Diheme Cytochrome SoxA; Sulfur Oxidation Protein SoxA; Cytochrome C; Sulfur Oxidation Protein; Diheme Cytochrome C Sulfur Oxidising Protein SoxA; Chain G Soxax Complex; SoxA Protein; Sulfur Oxidation Diheme Cytochrome SoxA; Sulfur Oxidation
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MRPKVPFLTCLCALALLLAPTFRAGAQEDASEKEIERYRAMINDPMANPGYLAVDRGEALWAEKRGTKNVSLESCDLGLG AGKLEGAYAKLPRYFADADKVMDLEQRLLWCMDKIQGLDIKPIMAKPFSGPGRGSDMEDLVAFIANKSNGMKIAVPLDHA KEKEAYGIGEALFFRRSAINDFSCSTCHADAGKRIRLQGLPQLDKPGKDAQLTMGSWPTYRVSQSALRTMQHRLWDCYRQ MRMPAPDYASEAVTALTVFLNAQAAGGELNVPSIKR
Sequences:
>Translated_276_residues MRPKVPFLTCLCALALLLAPTFRAGAQEDASEKEIERYRAMINDPMANPGYLAVDRGEALWAEKRGTKNVSLESCDLGLG AGKLEGAYAKLPRYFADADKVMDLEQRLLWCMDKIQGLDIKPIMAKPFSGPGRGSDMEDLVAFIANKSNGMKIAVPLDHA KEKEAYGIGEALFFRRSAINDFSCSTCHADAGKRIRLQGLPQLDKPGKDAQLTMGSWPTYRVSQSALRTMQHRLWDCYRQ MRMPAPDYASEAVTALTVFLNAQAAGGELNVPSIKR >Mature_276_residues MRPKVPFLTCLCALALLLAPTFRAGAQEDASEKEIERYRAMINDPMANPGYLAVDRGEALWAEKRGTKNVSLESCDLGLG AGKLEGAYAKLPRYFADADKVMDLEQRLLWCMDKIQGLDIKPIMAKPFSGPGRGSDMEDLVAFIANKSNGMKIAVPLDHA KEKEAYGIGEALFFRRSAINDFSCSTCHADAGKRIRLQGLPQLDKPGKDAQLTMGSWPTYRVSQSALRTMQHRLWDCYRQ MRMPAPDYASEAVTALTVFLNAQAAGGELNVPSIKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30465; Mature: 30465
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPKVPFLTCLCALALLLAPTFRAGAQEDASEKEIERYRAMINDPMANPGYLAVDRGEAL CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCHH WAEKRGTKNVSLESCDLGLGAGKLEGAYAKLPRYFADADKVMDLEQRLLWCMDKIQGLDI HHHCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KPIMAKPFSGPGRGSDMEDLVAFIANKSNGMKIAVPLDHAKEKEAYGIGEALFFRRSAIN CCHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHCCHHHHHHHHHHCC DFSCSTCHADAGKRIRLQGLPQLDKPGKDAQLTMGSWPTYRVSQSALRTMQHRLWDCYRQ CCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH MRMPAPDYASEAVTALTVFLNAQAAGGELNVPSIKR HCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MRPKVPFLTCLCALALLLAPTFRAGAQEDASEKEIERYRAMINDPMANPGYLAVDRGEAL CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCHH WAEKRGTKNVSLESCDLGLGAGKLEGAYAKLPRYFADADKVMDLEQRLLWCMDKIQGLDI HHHCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KPIMAKPFSGPGRGSDMEDLVAFIANKSNGMKIAVPLDHAKEKEAYGIGEALFFRRSAIN CCHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHCCHHHHHHHHHHCC DFSCSTCHADAGKRIRLQGLPQLDKPGKDAQLTMGSWPTYRVSQSALRTMQHRLWDCYRQ CCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH MRMPAPDYASEAVTALTVFLNAQAAGGELNVPSIKR HCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA