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The map label for this gene is ybgL [C]

Identifier: 154245444

GI number: 154245444

Start: 1705554

End: 1706309

Strand: Reverse

Name: ybgL [C]

Synonym: Xaut_1497

Alternate gene names: 154245444

Gene position: 1706309-1705554 (Counterclockwise)

Preceding gene: 154245445

Following gene: 154245443

Centisome position: 32.14

GC content: 71.03

Gene sequence:

>756_bases
ATGCAGGTGGACCTCAATTCCGACCTCGGCGAGGGCTTCGGCGCCTACGCCATCACCGACGACGCGGCGCTGCTCGACAT
CGTCTCCTCGGCCAACCTTGCCTGCGGCCTGCATGCGGGGGACCCCGAGATCATGGCCCGCGTGTTCGCGCTGGCGAAGG
CCAAGGGCGTCAGCGTCGGCGCCCATCCCGGCTTTCCGGACCTGTGGGGCTTCGGCCGGCGCCGCATTCCTTTCTCCACG
GGGGAGATCGAGCGCCTCGTCGCCTATCAGGTCGGTGCCGCCCTGGGGCTGGCGGCCTATGCCGGCCATCGCGTGGCTTA
CGTGAAGGCCCACGGCGCCCTGTCCAACATGGCGGAGGAGAGCGCGGAAATCGCCGCCGCCATCGCCCGCGCGGTGAAGG
CGGTGGATGGCAGCCTGCCCATTCTCGCCGGCCCGCTGGGCGCGCAGGCTGAGGCCACCCGCGCGGCGGGGCTCACCCCC
ATCGCCGAGATCTTCGCCGATCGCGCCTATACGGAAGCCGGCCTGCTGGTGCCGCGCGGCCAGCCCGGCGCGGTCATCAC
CGATCCGGACGAGGCATCCGCGCGCGTCGTCGCCATGGTGAAGGCGGGCGCCATCATCACCGCATCCGGCACGCCGCTGC
CCACCGAGATCGGCTCCATCTGCGTGCATGGCGATTCAGCCCATGCGGTGGAGACCGCGAGGCGGGTGCGCCGACGGCTC
GAAGACGAGGGCATTTCCATTGTCCCCTTCGCCTGA

Upstream 100 bases:

>100_bases
GACGGCCCGCTGCGGCGCCCCGCGCAAGTCCGAGCCTGATGCCGGGATCGCGGCACGCCATATTCGGTCAGTCTCAAGCC
ATTCCTGAGGGGAAAGCACC

Downstream 100 bases:

>100_bases
AAGTCCTGCGCCAGCCCATTCTGGCCCGCGCCTGCTGGATGCCGGGGAAACCGCCCTCGTCGCCGAGTTCGGCGATGTGG
TGGACCCCGTCCTCAACGAC

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MQVDLNSDLGEGFGAYAITDDAALLDIVSSANLACGLHAGDPEIMARVFALAKAKGVSVGAHPGFPDLWGFGRRRIPFST
GEIERLVAYQVGAALGLAAYAGHRVAYVKAHGALSNMAEESAEIAAAIARAVKAVDGSLPILAGPLGAQAEATRAAGLTP
IAEIFADRAYTEAGLLVPRGQPGAVITDPDEASARVVAMVKAGAIITASGTPLPTEIGSICVHGDSAHAVETARRVRRRL
EDEGISIVPFA

Sequences:

>Translated_251_residues
MQVDLNSDLGEGFGAYAITDDAALLDIVSSANLACGLHAGDPEIMARVFALAKAKGVSVGAHPGFPDLWGFGRRRIPFST
GEIERLVAYQVGAALGLAAYAGHRVAYVKAHGALSNMAEESAEIAAAIARAVKAVDGSLPILAGPLGAQAEATRAAGLTP
IAEIFADRAYTEAGLLVPRGQPGAVITDPDEASARVVAMVKAGAIITASGTPLPTEIGSICVHGDSAHAVETARRVRRRL
EDEGISIVPFA
>Mature_251_residues
MQVDLNSDLGEGFGAYAITDDAALLDIVSSANLACGLHAGDPEIMARVFALAKAKGVSVGAHPGFPDLWGFGRRRIPFST
GEIERLVAYQVGAALGLAAYAGHRVAYVKAHGALSNMAEESAEIAAAIARAVKAVDGSLPILAGPLGAQAEATRAAGLTP
IAEIFADRAYTEAGLLVPRGQPGAVITDPDEASARVVAMVKAGAIITASGTPLPTEIGSICVHGDSAHAVETARRVRRRL
EDEGISIVPFA

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=248, Percent_Identity=42.3387096774194, Blast_Score=179, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 25702; Mature: 25702

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVDLNSDLGEGFGAYAITDDAALLDIVSSANLACGLHAGDPEIMARVFALAKAKGVSVG
CEECCCCCCCCCCCCEEEECCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCEEC
AHPGFPDLWGFGRRRIPFSTGEIERLVAYQVGAALGLAAYAGHRVAYVKAHGALSNMAEE
CCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHH
SAEIAAAIARAVKAVDGSLPILAGPLGAQAEATRAAGLTPIAEIFADRAYTEAGLLVPRG
HHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECC
QPGAVITDPDEASARVVAMVKAGAIITASGTPLPTEIGSICVHGDSAHAVETARRVRRRL
CCCCEEECCCCCCCEEEEEEECCEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHH
EDEGISIVPFA
HHCCEEEECCC
>Mature Secondary Structure
MQVDLNSDLGEGFGAYAITDDAALLDIVSSANLACGLHAGDPEIMARVFALAKAKGVSVG
CEECCCCCCCCCCCCEEEECCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCEEC
AHPGFPDLWGFGRRRIPFSTGEIERLVAYQVGAALGLAAYAGHRVAYVKAHGALSNMAEE
CCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHH
SAEIAAAIARAVKAVDGSLPILAGPLGAQAEATRAAGLTPIAEIFADRAYTEAGLLVPRG
HHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECC
QPGAVITDPDEASARVVAMVKAGAIITASGTPLPTEIGSICVHGDSAHAVETARRVRRRL
CCCCEEECCCCCCCEEEEEEECCEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHH
EDEGISIVPFA
HHCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA