| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154245354
Identifier: 154245354
GI number: 154245354
Start: 1612094
End: 1612813
Strand: Direct
Name: 154245354
Synonym: Xaut_1407
Alternate gene names: NA
Gene position: 1612094-1612813 (Clockwise)
Preceding gene: 154245353
Following gene: 154245355
Centisome position: 30.37
GC content: 74.58
Gene sequence:
>720_bases ATGAAGCTGGAACCGGTTATGTCGGGGGGATTAAGCGAGGACGCGCCAGCGGCGGTCGACCCGTTGGCGGCGAGCGCCCG TGTGAACGAGGAACGGCGCCTGCGCCGGCTCGACATGGCGGCCGGCGCCGTGGCCGCTGCCGCCGCGGGGGCATTCCTTG TCAATCTCCTGCTGCTGCAGGCGCCGCCCGCCGGCGCGCCGCTGCCGGAGGCGCGCCCGGCCGGGGCCATCCAGGCCCTC GACCGCGCCAGGACCACCCGCACCACCGTGCCACTGCCGCCGCACAGCCCGGGCGGCACTCAAGCCGCGTCCACCGGCGG CGCCACCGATGGCGCGCTCGGCTATCTGTCCATCCGCACCACAGTCACCGGAACACCGGTGCCGCTGGTGCCCGGCACGG CGGCGGCTGGCCGTTCGACATCCCAAGCCTATGCCGATCCCGTGCCCCGCCGTCCGCCGGCCAGCGTCGGCGCGGGGACG GATGTGACCGGCGCGGTGCGTCCGCCGGGCGATGTCCCGGCCTCGCCGCGCCTGCTCGCGGTGCAGAAGGCGCTGGCGAA GCTCGGCTACGGCCCGCTGAAGGTGGACGGCCGTCCGGGCGGCGAAACCCGCACCGCCATCCAGCGGTTCCAGCGCGACC GCAACATGACCGCCGACGGCGAGGTCAGCGACAAGCTCGTGCGTGAGCTGGCCTCGGTCTCCGGCGTCACGGTCAACTGA
Upstream 100 bases:
>100_bases CCGTGACATTGCCGCTTGCGGCTGAGCCGGCGGTGCGGGGGGAGGGCGTGGTGGCGCCGTTCCCCACCCGCCTCGACGAC ACCCGCGCGAAGAGGTTGGC
Downstream 100 bases:
>100_bases ATGCGGCTCAAGAGCGCCATCTTCGTCTCCGCCCTGCTCCGCCGTGCCCAGGTGGAAGGCGCTTATGGCGTGGTGGTCCG CCGCGGCTCCGAGGAGGCGG
Product: peptidoglycan binding domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MKLEPVMSGGLSEDAPAAVDPLAASARVNEERRLRRLDMAAGAVAAAAAGAFLVNLLLLQAPPAGAPLPEARPAGAIQAL DRARTTRTTVPLPPHSPGGTQAASTGGATDGALGYLSIRTTVTGTPVPLVPGTAAAGRSTSQAYADPVPRRPPASVGAGT DVTGAVRPPGDVPASPRLLAVQKALAKLGYGPLKVDGRPGGETRTAIQRFQRDRNMTADGEVSDKLVRELASVSGVTVN
Sequences:
>Translated_239_residues MKLEPVMSGGLSEDAPAAVDPLAASARVNEERRLRRLDMAAGAVAAAAAGAFLVNLLLLQAPPAGAPLPEARPAGAIQAL DRARTTRTTVPLPPHSPGGTQAASTGGATDGALGYLSIRTTVTGTPVPLVPGTAAAGRSTSQAYADPVPRRPPASVGAGT DVTGAVRPPGDVPASPRLLAVQKALAKLGYGPLKVDGRPGGETRTAIQRFQRDRNMTADGEVSDKLVRELASVSGVTVN >Mature_239_residues MKLEPVMSGGLSEDAPAAVDPLAASARVNEERRLRRLDMAAGAVAAAAAGAFLVNLLLLQAPPAGAPLPEARPAGAIQAL DRARTTRTTVPLPPHSPGGTQAASTGGATDGALGYLSIRTTVTGTPVPLVPGTAAAGRSTSQAYADPVPRRPPASVGAGT DVTGAVRPPGDVPASPRLLAVQKALAKLGYGPLKVDGRPGGETRTAIQRFQRDRNMTADGEVSDKLVRELASVSGVTVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24126; Mature: 24126
Theoretical pI: Translated: 10.71; Mature: 10.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLEPVMSGGLSEDAPAAVDPLAASARVNEERRLRRLDMAAGAVAAAAAGAFLVNLLLLQ CCCCCCCCCCCCCCCCCHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC APPAGAPLPEARPAGAIQALDRARTTRTTVPLPPHSPGGTQAASTGGATDGALGYLSIRT CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE TVTGTPVPLVPGTAAAGRSTSQAYADPVPRRPPASVGAGTDVTGAVRPPGDVPASPRLLA EECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH VQKALAKLGYGPLKVDGRPGGETRTAIQRFQRDRNMTADGEVSDKLVRELASVSGVTVN HHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKLEPVMSGGLSEDAPAAVDPLAASARVNEERRLRRLDMAAGAVAAAAAGAFLVNLLLLQ CCCCCCCCCCCCCCCCCHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC APPAGAPLPEARPAGAIQALDRARTTRTTVPLPPHSPGGTQAASTGGATDGALGYLSIRT CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE TVTGTPVPLVPGTAAAGRSTSQAYADPVPRRPPASVGAGTDVTGAVRPPGDVPASPRLLA EECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH VQKALAKLGYGPLKVDGRPGGETRTAIQRFQRDRNMTADGEVSDKLVRELASVSGVTVN HHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA