| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154245278
Identifier: 154245278
GI number: 154245278
Start: 1526778
End: 1527764
Strand: Direct
Name: 154245278
Synonym: Xaut_1330
Alternate gene names: NA
Gene position: 1526778-1527764 (Clockwise)
Preceding gene: 154245277
Following gene: 154245279
Centisome position: 28.76
GC content: 66.26
Gene sequence:
>987_bases ATGCGTATCCTGTCAGCGGCGCTGGCCTTTGCGGCCGCGCTCGGACTTTCGACCGGTACTGCCACCGTCGCCAGCGCCCA GGCCTATCCCAGCCGCCCGATCACCATGGTAGTGCCCTTCGCCGCCGGCGGACCCACCGACACGGTGGCGCGCCTGGTGG CCGAATCCATGTCGAAGTCGCTGGGCCAGCAGGTGATCGTGGAGAATGTGGGCGGCGCCGGCGGCACCCGTGGTGCCGGC CAGGTGGCGAAGGCGGCGCCGGATGGATACACGCTGTTGCTCCACCATATCGGCCACGCCACCGCCGCCAGCCTCTATCG CAAGCTGCCCTATAATCCCGCCACGGATTTCGAGGCGGTGGGCCTCGTCACCGCCGTGCCCATGACCCTCATCGCCAAGA ATGGCTTGGCCCCCAAGACCATGGGCGAGGTGGTGGAATTCGTGAAGGCGAACAAGGACAAGGTCACCTACGGCAATGCC GGCGTCGGCTCGGCCTCGCACCTGTGCGGCATGCTGCTGATGTCCTCCGTCGGCGCGCAGATGACCACCGTGCCCTATCA GGGCACGGGCCCGGCCATGAACGACCTCGTGGGCGGCCAGATCGACCTCATGTGCGACCAGACCACCAACACCACCGGCC AGATCAAGGGCGGTAAAGTGAAGGTCTATGGCGTCACCACCAAGGAGCGGGTGAAGTCCCTGCCCGACGTCCTCACCATG CAGGAAAGCGGGCTGAAGGACTTCGAAGTGGCGGTGTGGCACGGCGTCTATGTGCCCAAGGGCACGCCGAAGGACATCGT GGAGAAGCTGAACGCCGCCCTCAACACGGCGCTGGATGATCCCAAGGTGATCGCCCGCTTCGCCGACCTCGGCACCGAGC CGGAGTCCAAGGACCGCCGCAGCCCGGCCTTCCACAAGGACTTCGTGGTGGCCGAAATCGCCAAGTGGAAGCCCATCATC CAGTCCGCCGGCGTCTACGCCGACTGA
Upstream 100 bases:
>100_bases AGGGGAAAGTTACCTCCATTTCGCACTTGACGGGTGCCGCTACGCGAACTTCAAAAGGGGGAAGGGCGTTCGTCAGAAAC ACCCTGGAGGAGGAAACCCC
Downstream 100 bases:
>100_bases TCGGTCGGTCCGCCGGACGGTGTCCGGCGCGCCGCGCCCGAGCCAGCGCCCACACTTAAGCTTAAAGACAACAGACGGCC GAACGTGCCGCCCGGGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: ORFY [H]
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MRILSAALAFAAALGLSTGTATVASAQAYPSRPITMVVPFAAGGPTDTVARLVAESMSKSLGQQVIVENVGGAGGTRGAG QVAKAAPDGYTLLLHHIGHATAASLYRKLPYNPATDFEAVGLVTAVPMTLIAKNGLAPKTMGEVVEFVKANKDKVTYGNA GVGSASHLCGMLLMSSVGAQMTTVPYQGTGPAMNDLVGGQIDLMCDQTTNTTGQIKGGKVKVYGVTTKERVKSLPDVLTM QESGLKDFEVAVWHGVYVPKGTPKDIVEKLNAALNTALDDPKVIARFADLGTEPESKDRRSPAFHKDFVVAEIAKWKPII QSAGVYAD
Sequences:
>Translated_328_residues MRILSAALAFAAALGLSTGTATVASAQAYPSRPITMVVPFAAGGPTDTVARLVAESMSKSLGQQVIVENVGGAGGTRGAG QVAKAAPDGYTLLLHHIGHATAASLYRKLPYNPATDFEAVGLVTAVPMTLIAKNGLAPKTMGEVVEFVKANKDKVTYGNA GVGSASHLCGMLLMSSVGAQMTTVPYQGTGPAMNDLVGGQIDLMCDQTTNTTGQIKGGKVKVYGVTTKERVKSLPDVLTM QESGLKDFEVAVWHGVYVPKGTPKDIVEKLNAALNTALDDPKVIARFADLGTEPESKDRRSPAFHKDFVVAEIAKWKPII QSAGVYAD >Mature_328_residues MRILSAALAFAAALGLSTGTATVASAQAYPSRPITMVVPFAAGGPTDTVARLVAESMSKSLGQQVIVENVGGAGGTRGAG QVAKAAPDGYTLLLHHIGHATAASLYRKLPYNPATDFEAVGLVTAVPMTLIAKNGLAPKTMGEVVEFVKANKDKVTYGNA GVGSASHLCGMLLMSSVGAQMTTVPYQGTGPAMNDLVGGQIDLMCDQTTNTTGQIKGGKVKVYGVTTKERVKSLPDVLTM QESGLKDFEVAVWHGVYVPKGTPKDIVEKLNAALNTALDDPKVIARFADLGTEPESKDRRSPAFHKDFVVAEIAKWKPII QSAGVYAD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34187; Mature: 34187
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILSAALAFAAALGLSTGTATVASAQAYPSRPITMVVPFAAGGPTDTVARLVAESMSKS CHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH LGQQVIVENVGGAGGTRGAGQVAKAAPDGYTLLLHHIGHATAASLYRKLPYNPATDFEAV HHHHHHHHHCCCCCCCCCCCHHHHCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHH GLVTAVPMTLIAKNGLAPKTMGEVVEFVKANKDKVTYGNAGVGSASHLCGMLLMSSVGAQ HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCC MTTVPYQGTGPAMNDLVGGQIDLMCDQTTNTTGQIKGGKVKVYGVTTKERVKSLPDVLTM EEECCCCCCCCHHHHHCCCEEEEEECCCCCCCCEECCCEEEEEECCHHHHHHHHHHHHHH QESGLKDFEVAVWHGVYVPKGTPKDIVEKLNAALNTALDDPKVIARFADLGTEPESKDRR HHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCC SPAFHKDFVVAEIAKWKPIIQSAGVYAD CCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRILSAALAFAAALGLSTGTATVASAQAYPSRPITMVVPFAAGGPTDTVARLVAESMSKS CHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH LGQQVIVENVGGAGGTRGAGQVAKAAPDGYTLLLHHIGHATAASLYRKLPYNPATDFEAV HHHHHHHHHCCCCCCCCCCCHHHHCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHH GLVTAVPMTLIAKNGLAPKTMGEVVEFVKANKDKVTYGNAGVGSASHLCGMLLMSSVGAQ HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCC MTTVPYQGTGPAMNDLVGGQIDLMCDQTTNTTGQIKGGKVKVYGVTTKERVKSLPDVLTM EEECCCCCCCCHHHHHCCCEEEEEECCCCCCCCEECCCEEEEEECCHHHHHHHHHHHHHH QESGLKDFEVAVWHGVYVPKGTPKDIVEKLNAALNTALDDPKVIARFADLGTEPESKDRR HHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCC SPAFHKDFVVAEIAKWKPIIQSAGVYAD CCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]