| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154245221
Identifier: 154245221
GI number: 154245221
Start: 1466609
End: 1467160
Strand: Reverse
Name: 154245221
Synonym: Xaut_1273
Alternate gene names: NA
Gene position: 1467160-1466609 (Counterclockwise)
Preceding gene: 154245222
Following gene: 154245220
Centisome position: 27.64
GC content: 71.2
Gene sequence:
>552_bases GTGGACCCGGCCGCCAAAACGTCCACCCAAGCAGCCGATCCAACACCACCCCTCGACCCGCCCCAAACCTTCGGAACCAT GCCGCCCATGGCTGAACGCCCAAGCAACGCCCACCTCACCGCCTTCGCCCGGGGCCTGATCTCGCCGGCGCCGGTGCGGT TTCTCGCGCTGCTGGCCCTGTGCGGGGCCTATATCCAGGGCGGCCTCACCAAGGCTCTGGACTTCAACGGCGCGCTGGCG GAGATGGCCCATTTCGGGCTCACCCCGCAGGCGCCGTTCGCCGTGGCCGTGATCGTGCTGGAGCTGGGCGCCTCGGCCCT CATCCTCAGCGGCCGGCTGCGCTGGCTGGGGGCGCTGGGGCTGGCGGGCTTCACGGTGCTGGCCGCCCTCCTCGCCAACC GCTTCTGGGCCATGCCGCCGCCGGAGCGCACCATGGCCGCCAACGCCTTCTTCGAGCATCTGGGCCTGGCCGGCGCCTTC GTGCTGGTGGCGTGGTACGATCTTGTCCACGGCGCCTCCAACGGGACCGGCCAGCACGGGAGAGACCTGTGA
Upstream 100 bases:
>100_bases CGGCCGGACAAGCGGCGAGATGGACCCTCCGGTCAAGCCGGAGGGCGGCGATGGTTAAATGCGGTCTGCCCCCTCTCCCG CTTGCGGGGGAGCGTTCCCT
Downstream 100 bases:
>100_bases GCGACCACACCCACGGCGCGCCATCTGCCACCCCTCCGGCAGCCCCGCAGCCCGCAGCCGGCGGCGCCTTCGCGCCGTTG CGGCGGCCGGTGTTCGCCGT
Product: DoxX family protein
Products: NA
Alternate protein names: DoxX Family; Transmembrane Protein
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MDPAAKTSTQAADPTPPLDPPQTFGTMPPMAERPSNAHLTAFARGLISPAPVRFLALLALCGAYIQGGLTKALDFNGALA EMAHFGLTPQAPFAVAVIVLELGASALILSGRLRWLGALGLAGFTVLAALLANRFWAMPPPERTMAANAFFEHLGLAGAF VLVAWYDLVHGASNGTGQHGRDL
Sequences:
>Translated_183_residues MDPAAKTSTQAADPTPPLDPPQTFGTMPPMAERPSNAHLTAFARGLISPAPVRFLALLALCGAYIQGGLTKALDFNGALA EMAHFGLTPQAPFAVAVIVLELGASALILSGRLRWLGALGLAGFTVLAALLANRFWAMPPPERTMAANAFFEHLGLAGAF VLVAWYDLVHGASNGTGQHGRDL >Mature_183_residues MDPAAKTSTQAADPTPPLDPPQTFGTMPPMAERPSNAHLTAFARGLISPAPVRFLALLALCGAYIQGGLTKALDFNGALA EMAHFGLTPQAPFAVAVIVLELGASALILSGRLRWLGALGLAGFTVLAALLANRFWAMPPPERTMAANAFFEHLGLAGAF VLVAWYDLVHGASNGTGQHGRDL
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19084; Mature: 19084
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPAAKTSTQAADPTPPLDPPQTFGTMPPMAERPSNAHLTAFARGLISPAPVRFLALLAL CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHH CGAYIQGGLTKALDFNGALAEMAHFGLTPQAPFAVAVIVLELGASALILSGRLRWLGALG HHHHHHCCHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LAGFTVLAALLANRFWAMPPPERTMAANAFFEHLGLAGAFVLVAWYDLVHGASNGTGQHG HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC RDL CCC >Mature Secondary Structure MDPAAKTSTQAADPTPPLDPPQTFGTMPPMAERPSNAHLTAFARGLISPAPVRFLALLAL CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHH CGAYIQGGLTKALDFNGALAEMAHFGLTPQAPFAVAVIVLELGASALILSGRLRWLGALG HHHHHHCCHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LAGFTVLAALLANRFWAMPPPERTMAANAFFEHLGLAGAFVLVAWYDLVHGASNGTGQHG HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC RDL CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA