| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is pgl [H]
Identifier: 154245199
GI number: 154245199
Start: 1441306
End: 1442034
Strand: Reverse
Name: pgl [H]
Synonym: Xaut_1251
Alternate gene names: 154245199
Gene position: 1442034-1441306 (Counterclockwise)
Preceding gene: 154245200
Following gene: 154245198
Centisome position: 27.16
GC content: 74.76
Gene sequence:
>729_bases ATGACGACATCCTCCCACCCGACACCCGCCCTCCCCTTCGCCCTTGCCGCCTATGACGACCCCGCTGCCCTTGCCCGCGC CCTGGCGGCGCACGTGGCGGAGGCGTTGCGCGCCCGCGTCGCCCGCGACGGATCGGCGAGCCTTGCCGTCTCGGGCGGCC GCACGCCGACGCGCTTCTTCGAGACCCTGTCCGGCGCGCCGCTCGACTGGAGCCGCATCACCGTGACCCTGGTGGATGAG CGCTGGGTGCCGGAAACATCGGATCGCTCCAACGCCGCCCTGGTGCGGCGCCACCTGCTCAAGGGACCTGCCGCCGCCGC CCGCTTCGTACCGCTCTTTACCGGCGCGCCGACGCCGGAAGAGGGGCTCGCGGGGGCCGAGGCCGCCGTCGCCGCCCTGC GCGCCCCGTTCGCCGCCGTGGTGCTGGGCATGGGGGATGACGGGCACACCGCCTCCTTCTTCCCCGGCGCGCCGACGCTT GCCGCCGCCATCGATCCGGCCGGCACGGCGCGTCTCATCGCCGTGCGCGCGGAGGCGGCCGGCGAGCCGCGCATCACTTT CACCCTGCCGCCCCTCATCTCAGCCGACCTGCTGCTCCTGCACATCGAGGGCGCGACCAAGCGCGCGGTGCTGGAGCGGG CCGCGGCCGGTGGCAATGGGGCGGACCAGCCGATCCGCGCCGTGCTCGCCAATGCCCCAAGGCCGCTGGACGTGCTCTGG TGTCCCTGA
Upstream 100 bases:
>100_bases ACCGCCGGCACCTGGGGGCCCTCCGCCGCCATCGCCCTCATCGAGCGGGACGGACGGACCTGGACCGACGATGCCTGAGG CCGCCTTTTCCGAGAAACCC
Downstream 100 bases:
>100_bases AGCCGTTTTGACTGCCTCCCCTTTCCTTCCCGCGACCCGGGTTCCCACATTGCCCAAACAGGGCCTGATGGAGATTTCGC GCCCATGACGTCTAACGCCC
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MTTSSHPTPALPFALAAYDDPAALARALAAHVAEALRARVARDGSASLAVSGGRTPTRFFETLSGAPLDWSRITVTLVDE RWVPETSDRSNAALVRRHLLKGPAAAARFVPLFTGAPTPEEGLAGAEAAVAALRAPFAAVVLGMGDDGHTASFFPGAPTL AAAIDPAGTARLIAVRAEAAGEPRITFTLPPLISADLLLLHIEGATKRAVLERAAAGGNGADQPIRAVLANAPRPLDVLW CP
Sequences:
>Translated_242_residues MTTSSHPTPALPFALAAYDDPAALARALAAHVAEALRARVARDGSASLAVSGGRTPTRFFETLSGAPLDWSRITVTLVDE RWVPETSDRSNAALVRRHLLKGPAAAARFVPLFTGAPTPEEGLAGAEAAVAALRAPFAAVVLGMGDDGHTASFFPGAPTL AAAIDPAGTARLIAVRAEAAGEPRITFTLPPLISADLLLLHIEGATKRAVLERAAAGGNGADQPIRAVLANAPRPLDVLW CP >Mature_241_residues TTSSHPTPALPFALAAYDDPAALARALAAHVAEALRARVARDGSASLAVSGGRTPTRFFETLSGAPLDWSRITVTLVDER WVPETSDRSNAALVRRHLLKGPAAAARFVPLFTGAPTPEEGLAGAEAAVAALRAPFAAVVLGMGDDGHTASFFPGAPTLA AAIDPAGTARLIAVRAEAAGEPRITFTLPPLISADLLLLHIEGATKRAVLERAAAGGNGADQPIRAVLANAPRPLDVLWC P
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI52145310, Length=224, Percent_Identity=30.3571428571429, Blast_Score=73, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6321687, Length=242, Percent_Identity=24.7933884297521, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 [H]
Pfam domain/function: NA
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 24894; Mature: 24762
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSSHPTPALPFALAAYDDPAALARALAAHVAEALRARVARDGSASLAVSGGRTPTRFF CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH ETLSGAPLDWSRITVTLVDERWVPETSDRSNAALVRRHLLKGPAAAARFVPLFTGAPTPE HHHCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHEEEECCCCCCH EGLAGAEAAVAALRAPFAAVVLGMGDDGHTASFFPGAPTLAAAIDPAGTARLIAVRAEAA HCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHEECCCCCCEEEEEEEECCC GEPRITFTLPPLISADLLLLHIEGATKRAVLERAAAGGNGADQPIRAVLANAPRPLDVLW CCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEE CP CC >Mature Secondary Structure TTSSHPTPALPFALAAYDDPAALARALAAHVAEALRARVARDGSASLAVSGGRTPTRFF CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH ETLSGAPLDWSRITVTLVDERWVPETSDRSNAALVRRHLLKGPAAAARFVPLFTGAPTPE HHHCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHEEEECCCCCCH EGLAGAEAAVAALRAPFAAVVLGMGDDGHTASFFPGAPTLAAAIDPAGTARLIAVRAEAA HCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHEECCCCCCEEEEEEEECCC GEPRITFTLPPLISADLLLLHIEGATKRAVLERAAAGGNGADQPIRAVLANAPRPLDVLW CCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEE CP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10400573; 11481430 [H]