| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154245119
Identifier: 154245119
GI number: 154245119
Start: 1347259
End: 1347819
Strand: Reverse
Name: 154245119
Synonym: Xaut_1171
Alternate gene names: NA
Gene position: 1347819-1347259 (Counterclockwise)
Preceding gene: 154245121
Following gene: 154245118
Centisome position: 25.39
GC content: 74.15
Gene sequence:
>561_bases GTGGCCGCGCCGGCGCCGCAGGACAAGGGGTGCCGCGCCCTCTTCCCCATTCAGAGACGCCCCGTGTCGAACCCGCCCCG CATGCTCCGCCGCCAGTCCGGCCCCCGGCCGCTCGCCGACTTCGTCGCGCCGAGCATCTCGGACCTGTGCGGCAAGGCGG GCTTCTCGGTGGTGGAGGTGGTGACCCACTGGGACGAGATCGTGGGGCCGGACCTTGCCCCGCGCTGCATGCCCGTACGC CTGCAATGGCCCAAGGAGGACGGCGCCGCCGCAACCCTCGTGGTGCGGGTGGAAGGGGCCTATGCCATCGAGCTGCAATA TGCGGCCGGCGTGGTGGTGGAGCGCATCAATGCCTATTTCGGCTGGCGCTGCGTGGGGCGCCTCGCCTTGCGCCAGGGGC CGGTGCCCCAGCGCCACGCCCGCCAGCTTCCGCCGCCCAAGCCCGAGCCGGCGACCATCGCCGCCGTGCGCGGGGAAATT GGCGCCTTCGAGGACGAGGCGCTGGCCGCCTCCCTCGCCCGCCTCGGTGCGCTGGTGCGGCGCGAGCGCGGGCACGGCTG A
Upstream 100 bases:
>100_bases CCGAGGCCCGCGCAGTCGCTCTCGCAGCGGCGCGCGCTGCGGCTCTCGCTGCGGCTCTTGCCGTGGCTCTTGCGGCGGGG GAGGATGTCATGCGGCCAAG
Downstream 100 bases:
>100_bases ACCGCTTTCGGCGGGCCCGCGGCGGCACTGAACAAGCTGTGATCAGCGCAAGGTTTGCCGCCATACGGGCGACATGTTAG AGCGCCATGGATTCCACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MAAPAPQDKGCRALFPIQRRPVSNPPRMLRRQSGPRPLADFVAPSISDLCGKAGFSVVEVVTHWDEIVGPDLAPRCMPVR LQWPKEDGAAATLVVRVEGAYAIELQYAAGVVVERINAYFGWRCVGRLALRQGPVPQRHARQLPPPKPEPATIAAVRGEI GAFEDEALAASLARLGALVRRERGHG
Sequences:
>Translated_186_residues MAAPAPQDKGCRALFPIQRRPVSNPPRMLRRQSGPRPLADFVAPSISDLCGKAGFSVVEVVTHWDEIVGPDLAPRCMPVR LQWPKEDGAAATLVVRVEGAYAIELQYAAGVVVERINAYFGWRCVGRLALRQGPVPQRHARQLPPPKPEPATIAAVRGEI GAFEDEALAASLARLGALVRRERGHG >Mature_185_residues AAPAPQDKGCRALFPIQRRPVSNPPRMLRRQSGPRPLADFVAPSISDLCGKAGFSVVEVVTHWDEIVGPDLAPRCMPVRL QWPKEDGAAATLVVRVEGAYAIELQYAAGVVVERINAYFGWRCVGRLALRQGPVPQRHARQLPPPKPEPATIAAVRGEIG AFEDEALAASLARLGALVRRERGHG
Specific function: Unknown
COG id: COG5389
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20166; Mature: 20034
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPAPQDKGCRALFPIQRRPVSNPPRMLRRQSGPRPLADFVAPSISDLCGKAGFSVVEV CCCCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCHHHHHCCCHHHHHHHCCHHHHHH VTHWDEIVGPDLAPRCMPVRLQWPKEDGAAATLVVRVEGAYAIELQYAAGVVVERINAYF HHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCEEEEEHHHHHHHHHHHHHHH GWRCVGRLALRQGPVPQRHARQLPPPKPEPATIAAVRGEIGAFEDEALAASLARLGALVR HHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH RERGHG HHCCCC >Mature Secondary Structure AAPAPQDKGCRALFPIQRRPVSNPPRMLRRQSGPRPLADFVAPSISDLCGKAGFSVVEV CCCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCHHHHHCCCHHHHHHHCCHHHHHH VTHWDEIVGPDLAPRCMPVRLQWPKEDGAAATLVVRVEGAYAIELQYAAGVVVERINAYF HHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCEEEEEHHHHHHHHHHHHHHH GWRCVGRLALRQGPVPQRHARQLPPPKPEPATIAAVRGEIGAFEDEALAASLARLGALVR HHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH RERGHG HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA