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The map label for this gene is xylZ [H]

Identifier: 154245084

GI number: 154245084

Start: 1307111

End: 1308130

Strand: Direct

Name: xylZ [H]

Synonym: Xaut_1136

Alternate gene names: 154245084

Gene position: 1307111-1308130 (Clockwise)

Preceding gene: 154245083

Following gene: 154245085

Centisome position: 24.62

GC content: 68.04

Gene sequence:

>1020_bases
GTGAGCCACAAGATCGCGCTGAGCTTCGAGGACGGGGTCACCCGCTTCATCACCTGCGGCACCGGGGAGACGGTGGCGGA
TGCCGCCTATCGCTCCGGCATCAACGTGCCGTTCGACTGCCGTGACGGCGCCTGCGGCACCTGCAAGAGCCATTGCGAGA
GCGGCGCGTACGACAAGGGCGACTATATCGAGGACGCCCTCACCGAGGACGAGGCGGCGGAGGGCTATGTGCTCACCTGC
CAGATGCGGCCGAAAAGCGATTGCGTGGTGAAGATCGCCGCCACCTCGGCCATGTGCAAGGCGGGGGCCTCCACCTTTTC
CGCCCGCCTGTCGCGGCTGGAGCGGCTTTCGCCCACCACGCTCGGCTTCGCGCTGAAGGTGGATGCGGGGGAATTGTCCT
TCCTGCCCGGGCAATATGCCAATCTGAGCCTGCCCGGCACGCGGGAGGTGCGCGCCTATTCCTTCTCCAGCCTGCCGCAC
GACGGCGAGGTGGAGTTCCTGGTGCGCAACATTCCCGGCGGGCGCATGTCGTCCTTCCTCGCCGAGCGGGCGAAGGTGGG
CGATGCGATGAGCTTCACCGCGCCCATGGGCTCGTTCTATCTGCGGCCGGTGACGCGGCCGCTGCTGTTCCTCGCCGGCG
GCACCGGGCTCGCGCCCTTCCTCGCCATGCTGGACCTTCTGGCGCGCGACGGGCTGAACGTGCCGGCGCACCTCGTCTAT
GGCGTCACCTCCGACGCCGACCTGGTGCTGGTGGACAGGCTGGAGGCGTTCGCCGCGCGCCTTAAGGGCTTCACCTTCTC
AACCGTTGTCGCCGACGCGGCAAGCAGCCATCCGCGCAAGGGCTATGTGACCCATCACCTTGCGCCCGAGCACCTCAACG
GCGGCGACGTGGACACCTATCTGTGCGGTCCGCCGGCCATGGTGGATGCGGTGCGCCACCATTTCCAGGTCGCGGGGGTG
ACCCCCGCCGCCTTCCACTACGAGAAATTCTCTCCCGGCGCCGAAGCCAAGGCGGCGTGA

Upstream 100 bases:

>100_bases
ACGGGGAACGACTTCAAGATCACCAACAAGAAGGTGGTTCTGAAGAACGATTACATCCACCAGGTGGTCGACATCTACCA
CATTTGAGCGGGAGGCGGCG

Downstream 100 bases:

>100_bases
GGGAGGCGGCGTGAGAGGCCGTCTGCGGGATCGCTCCCGGGGGCGCCCGCAGGTTTCCAAAGGCGCCTTATCACCGTCAT
GGCCGGGCTTGTCCCGGCCA

Product: oxidoreductase FAD/NAD(P)-binding subunit

Products: NA

Alternate protein names: Ferredoxin; Ferredoxin--NAD(+) reductase [H]

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MSHKIALSFEDGVTRFITCGTGETVADAAYRSGINVPFDCRDGACGTCKSHCESGAYDKGDYIEDALTEDEAAEGYVLTC
QMRPKSDCVVKIAATSAMCKAGASTFSARLSRLERLSPTTLGFALKVDAGELSFLPGQYANLSLPGTREVRAYSFSSLPH
DGEVEFLVRNIPGGRMSSFLAERAKVGDAMSFTAPMGSFYLRPVTRPLLFLAGGTGLAPFLAMLDLLARDGLNVPAHLVY
GVTSDADLVLVDRLEAFAARLKGFTFSTVVADAASSHPRKGYVTHHLAPEHLNGGDVDTYLCGPPAMVDAVRHHFQVAGV
TPAAFHYEKFSPGAEAKAA

Sequences:

>Translated_339_residues
MSHKIALSFEDGVTRFITCGTGETVADAAYRSGINVPFDCRDGACGTCKSHCESGAYDKGDYIEDALTEDEAAEGYVLTC
QMRPKSDCVVKIAATSAMCKAGASTFSARLSRLERLSPTTLGFALKVDAGELSFLPGQYANLSLPGTREVRAYSFSSLPH
DGEVEFLVRNIPGGRMSSFLAERAKVGDAMSFTAPMGSFYLRPVTRPLLFLAGGTGLAPFLAMLDLLARDGLNVPAHLVY
GVTSDADLVLVDRLEAFAARLKGFTFSTVVADAASSHPRKGYVTHHLAPEHLNGGDVDTYLCGPPAMVDAVRHHFQVAGV
TPAAFHYEKFSPGAEAKAA
>Mature_338_residues
SHKIALSFEDGVTRFITCGTGETVADAAYRSGINVPFDCRDGACGTCKSHCESGAYDKGDYIEDALTEDEAAEGYVLTCQ
MRPKSDCVVKIAATSAMCKAGASTFSARLSRLERLSPTTLGFALKVDAGELSFLPGQYANLSLPGTREVRAYSFSSLPHD
GEVEFLVRNIPGGRMSSFLAERAKVGDAMSFTAPMGSFYLRPVTRPLLFLAGGTGLAPFLAMLDLLARDGLNVPAHLVYG
VTSDADLVLVDRLEAFAARLKGFTFSTVVADAASSHPRKGYVTHHLAPEHLNGGDVDTYLCGPPAMVDAVRHHFQVAGVT
PAAFHYEKFSPGAEAKAA

Specific function: Electron transfer component of toluate 1,2-dioxygenase system [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Homo sapiens, GI49574502, Length=232, Percent_Identity=30.6034482758621, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI1788903, Length=218, Percent_Identity=27.5229357798165, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787098, Length=208, Percent_Identity=29.3269230769231, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1787658, Length=219, Percent_Identity=28.7671232876712, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1790359, Length=205, Percent_Identity=27.8048780487805, Blast_Score=62, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6322146, Length=181, Percent_Identity=33.1491712707182, Blast_Score=82, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6321673, Length=223, Percent_Identity=25.5605381165919, Blast_Score=70, Evalue=5e-13,

Paralogues:

None

Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: =1.18.1.3 [H]

Molecular weight: Translated: 36075; Mature: 35944

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHKIALSFEDGVTRFITCGTGETVADAAYRSGINVPFDCRDGACGTCKSHCESGAYDKG
CCCEEEEEECCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
DYIEDALTEDEAAEGYVLTCQMRPKSDCVVKIAATSAMCKAGASTFSARLSRLERLSPTT
CHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEHHHHHHHHCHHHHHHHHHHHHHCCCCC
LGFALKVDAGELSFLPGQYANLSLPGTREVRAYSFSSLPHDGEVEFLVRNIPGGRMSSFL
EEEEEEECCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCHHHHHHH
AERAKVGDAMSFTAPMGSFYLRPVTRPLLFLAGGTGLAPFLAMLDLLARDGLNVPAHLVY
HHHHHCCCCEEECCCCCHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEE
GVTSDADLVLVDRLEAFAARLKGFTFSTVVADAASSHPRKGYVTHHLAPEHLNGGDVDTY
EECCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEE
LCGPPAMVDAVRHHFQVAGVTPAAFHYEKFSPGAEAKAA
ECCCHHHHHHHHHHEEECCCCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SHKIALSFEDGVTRFITCGTGETVADAAYRSGINVPFDCRDGACGTCKSHCESGAYDKG
CCEEEEEECCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
DYIEDALTEDEAAEGYVLTCQMRPKSDCVVKIAATSAMCKAGASTFSARLSRLERLSPTT
CHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEHHHHHHHHCHHHHHHHHHHHHHCCCCC
LGFALKVDAGELSFLPGQYANLSLPGTREVRAYSFSSLPHDGEVEFLVRNIPGGRMSSFL
EEEEEEECCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCHHHHHHH
AERAKVGDAMSFTAPMGSFYLRPVTRPLLFLAGGTGLAPFLAMLDLLARDGLNVPAHLVY
HHHHHCCCCEEECCCCCHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEE
GVTSDADLVLVDRLEAFAARLKGFTFSTVVADAASSHPRKGYVTHHLAPEHLNGGDVDTY
EECCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEE
LCGPPAMVDAVRHHFQVAGVTPAAFHYEKFSPGAEAKAA
ECCCHHHHHHHHHHEEECCCCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938949 [H]