| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is cmk
Identifier: 154245059
GI number: 154245059
Start: 1280442
End: 1281068
Strand: Reverse
Name: cmk
Synonym: Xaut_1111
Alternate gene names: 154245059
Gene position: 1281068-1280442 (Counterclockwise)
Preceding gene: 154245060
Following gene: 154245056
Centisome position: 24.13
GC content: 73.68
Gene sequence:
>627_bases GTGGTCATCGCCATCGACGGGCCGGCGGCCTCCGGCAAGGGCACGCTGGCCCGCCGGCTCGCCGCTTATTACGGCCTGCC CCACCTCGACACCGGCCTGCTCTACCGGGCCGTGGGCGCCATCGTGCTGGCGCAGGGGCAGCTTCAGGACGAAGCGGCCT CGGTGGAGGCGGCGCGGACGCTGGACGTGGCCACGCTCGATCCCGAGGCCCTGCGCACGGCGGAGCTGGGCGAGGCGGCT TCGGTGGTGGCGGCGCGCGGCGGCGTGCGCGCCGCGCTGCTGGATCTCCAGCACCGATTCGCCGCCCAGCCCGGCGGTGC GGTACTGGACGGGCGGGACATCGGCACCGTCATTTGTCCAAAGGCACAGGCCAAGCTGTTCGTCACCGCCTCGCCGGAGG TGCGCGCCGAGCGGCGCCACCGCGAATTGATCGGGCGGGGCGAGGACGTGGCCTACGAGACGGTTCTGGCAGACATCCGC AAGCGCGACGAGCGTGATTCGGCCCGCGCCGCAGCCCCGCTGGTGCAGGCGGACGACGCGGTTCTGCTCGATACCTCGGC GCTGGATATCGCCCAGGCGTTCGCGGCAGCCCTCGCCATCGTGGAGGCGCGACGGGCCGGGCGGTGA
Upstream 100 bases:
>100_bases GGCGTGAGCGTGGACGACGTGGCCTTCATCGCCACCTCCTTCCCCACCTTCATGCCCATGATGCGCGGCCTCGGCGCCGT CATTTCGTGAAGTGACAGCC
Downstream 100 bases:
>100_bases AGCATCACACCTTCAGCCGGTCGAAGGTGCGCGCCATCTCCTCGCGGCTCACATGGTCGATCATGGCGGGCTCGAACACG TCCGTGCCGGCGGCGAAGGC
Product: cytidylate kinase
Products: NA
Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MVIAIDGPAASGKGTLARRLAAYYGLPHLDTGLLYRAVGAIVLAQGQLQDEAASVEAARTLDVATLDPEALRTAELGEAA SVVAARGGVRAALLDLQHRFAAQPGGAVLDGRDIGTVICPKAQAKLFVTASPEVRAERRHRELIGRGEDVAYETVLADIR KRDERDSARAAAPLVQADDAVLLDTSALDIAQAFAAALAIVEARRAGR
Sequences:
>Translated_208_residues MVIAIDGPAASGKGTLARRLAAYYGLPHLDTGLLYRAVGAIVLAQGQLQDEAASVEAARTLDVATLDPEALRTAELGEAA SVVAARGGVRAALLDLQHRFAAQPGGAVLDGRDIGTVICPKAQAKLFVTASPEVRAERRHRELIGRGEDVAYETVLADIR KRDERDSARAAAPLVQADDAVLLDTSALDIAQAFAAALAIVEARRAGR >Mature_208_residues MVIAIDGPAASGKGTLARRLAAYYGLPHLDTGLLYRAVGAIVLAQGQLQDEAASVEAARTLDVATLDPEALRTAELGEAA SVVAARGGVRAALLDLQHRFAAQPGGAVLDGRDIGTVICPKAQAKLFVTASPEVRAERRHRELIGRGEDVAYETVLADIR KRDERDSARAAAPLVQADDAVLLDTSALDIAQAFAAALAIVEARRAGR
Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]
COG id: COG0283
COG function: function code F; Cytidylate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1787139, Length=212, Percent_Identity=41.5094339622642, Blast_Score=128, Evalue=3e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KCY_XANP2 (A7IEB7)
Other databases:
- EMBL: CP000781 - RefSeq: YP_001416017.1 - ProteinModelPortal: A7IEB7 - SMR: A7IEB7 - STRING: A7IEB7 - GeneID: 5425336 - GenomeReviews: CP000781_GR - KEGG: xau:Xaut_1111 - eggNOG: COG0283 - HOGENOM: HBG354377 - OMA: DIGTVIC - ProtClustDB: PRK00023 - BioCyc: XAUT78245:XAUT_1111-MONOMER - GO: GO:0005737 - HAMAP: MF_00238 - InterPro: IPR000850 - InterPro: IPR003136 - InterPro: IPR011994 - PANTHER: PTHR21299:SF2 - TIGRFAMs: TIGR00017
Pfam domain/function: PF00406 ADK; PF02224 Cytidylate_kin
EC number: =2.7.4.14
Molecular weight: Translated: 21738; Mature: 21738
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIAIDGPAASGKGTLARRLAAYYGLPHLDTGLLYRAVGAIVLAQGQLQDEAASVEAART CEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHE LDVATLDPEALRTAELGEAASVVAARGGVRAALLDLQHRFAAQPGGAVLDGRDIGTVICP EEEEECCHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECCCCCCEEECC KAQAKLFVTASPEVRAERRHRELIGRGEDVAYETVLADIRKRDERDSARAAAPLVQADDA CCCCEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCE VLLDTSALDIAQAFAAALAIVEARRAGR EEEECHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVIAIDGPAASGKGTLARRLAAYYGLPHLDTGLLYRAVGAIVLAQGQLQDEAASVEAART CEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHE LDVATLDPEALRTAELGEAASVVAARGGVRAALLDLQHRFAAQPGGAVLDGRDIGTVICP EEEEECCHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECCCCCCEEECC KAQAKLFVTASPEVRAERRHRELIGRGEDVAYETVLADIRKRDERDSARAAAPLVQADDA CCCCEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCE VLLDTSALDIAQAFAAALAIVEARRAGR EEEECHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA