Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

Click here to switch to the map view.

The map label for this gene is cmk

Identifier: 154245059

GI number: 154245059

Start: 1280442

End: 1281068

Strand: Reverse

Name: cmk

Synonym: Xaut_1111

Alternate gene names: 154245059

Gene position: 1281068-1280442 (Counterclockwise)

Preceding gene: 154245060

Following gene: 154245056

Centisome position: 24.13

GC content: 73.68

Gene sequence:

>627_bases
GTGGTCATCGCCATCGACGGGCCGGCGGCCTCCGGCAAGGGCACGCTGGCCCGCCGGCTCGCCGCTTATTACGGCCTGCC
CCACCTCGACACCGGCCTGCTCTACCGGGCCGTGGGCGCCATCGTGCTGGCGCAGGGGCAGCTTCAGGACGAAGCGGCCT
CGGTGGAGGCGGCGCGGACGCTGGACGTGGCCACGCTCGATCCCGAGGCCCTGCGCACGGCGGAGCTGGGCGAGGCGGCT
TCGGTGGTGGCGGCGCGCGGCGGCGTGCGCGCCGCGCTGCTGGATCTCCAGCACCGATTCGCCGCCCAGCCCGGCGGTGC
GGTACTGGACGGGCGGGACATCGGCACCGTCATTTGTCCAAAGGCACAGGCCAAGCTGTTCGTCACCGCCTCGCCGGAGG
TGCGCGCCGAGCGGCGCCACCGCGAATTGATCGGGCGGGGCGAGGACGTGGCCTACGAGACGGTTCTGGCAGACATCCGC
AAGCGCGACGAGCGTGATTCGGCCCGCGCCGCAGCCCCGCTGGTGCAGGCGGACGACGCGGTTCTGCTCGATACCTCGGC
GCTGGATATCGCCCAGGCGTTCGCGGCAGCCCTCGCCATCGTGGAGGCGCGACGGGCCGGGCGGTGA

Upstream 100 bases:

>100_bases
GGCGTGAGCGTGGACGACGTGGCCTTCATCGCCACCTCCTTCCCCACCTTCATGCCCATGATGCGCGGCCTCGGCGCCGT
CATTTCGTGAAGTGACAGCC

Downstream 100 bases:

>100_bases
AGCATCACACCTTCAGCCGGTCGAAGGTGCGCGCCATCTCCTCGCGGCTCACATGGTCGATCATGGCGGGCTCGAACACG
TCCGTGCCGGCGGCGAAGGC

Product: cytidylate kinase

Products: NA

Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MVIAIDGPAASGKGTLARRLAAYYGLPHLDTGLLYRAVGAIVLAQGQLQDEAASVEAARTLDVATLDPEALRTAELGEAA
SVVAARGGVRAALLDLQHRFAAQPGGAVLDGRDIGTVICPKAQAKLFVTASPEVRAERRHRELIGRGEDVAYETVLADIR
KRDERDSARAAAPLVQADDAVLLDTSALDIAQAFAAALAIVEARRAGR

Sequences:

>Translated_208_residues
MVIAIDGPAASGKGTLARRLAAYYGLPHLDTGLLYRAVGAIVLAQGQLQDEAASVEAARTLDVATLDPEALRTAELGEAA
SVVAARGGVRAALLDLQHRFAAQPGGAVLDGRDIGTVICPKAQAKLFVTASPEVRAERRHRELIGRGEDVAYETVLADIR
KRDERDSARAAAPLVQADDAVLLDTSALDIAQAFAAALAIVEARRAGR
>Mature_208_residues
MVIAIDGPAASGKGTLARRLAAYYGLPHLDTGLLYRAVGAIVLAQGQLQDEAASVEAARTLDVATLDPEALRTAELGEAA
SVVAARGGVRAALLDLQHRFAAQPGGAVLDGRDIGTVICPKAQAKLFVTASPEVRAERRHRELIGRGEDVAYETVLADIR
KRDERDSARAAAPLVQADDAVLLDTSALDIAQAFAAALAIVEARRAGR

Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]

COG id: COG0283

COG function: function code F; Cytidylate kinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily

Homologues:

Organism=Escherichia coli, GI1787139, Length=212, Percent_Identity=41.5094339622642, Blast_Score=128, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): KCY_XANP2 (A7IEB7)

Other databases:

- EMBL:   CP000781
- RefSeq:   YP_001416017.1
- ProteinModelPortal:   A7IEB7
- SMR:   A7IEB7
- STRING:   A7IEB7
- GeneID:   5425336
- GenomeReviews:   CP000781_GR
- KEGG:   xau:Xaut_1111
- eggNOG:   COG0283
- HOGENOM:   HBG354377
- OMA:   DIGTVIC
- ProtClustDB:   PRK00023
- BioCyc:   XAUT78245:XAUT_1111-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00238
- InterPro:   IPR000850
- InterPro:   IPR003136
- InterPro:   IPR011994
- PANTHER:   PTHR21299:SF2
- TIGRFAMs:   TIGR00017

Pfam domain/function: PF00406 ADK; PF02224 Cytidylate_kin

EC number: =2.7.4.14

Molecular weight: Translated: 21738; Mature: 21738

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIAIDGPAASGKGTLARRLAAYYGLPHLDTGLLYRAVGAIVLAQGQLQDEAASVEAART
CEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHE
LDVATLDPEALRTAELGEAASVVAARGGVRAALLDLQHRFAAQPGGAVLDGRDIGTVICP
EEEEECCHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECCCCCCEEECC
KAQAKLFVTASPEVRAERRHRELIGRGEDVAYETVLADIRKRDERDSARAAAPLVQADDA
CCCCEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCE
VLLDTSALDIAQAFAAALAIVEARRAGR
EEEECHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVIAIDGPAASGKGTLARRLAAYYGLPHLDTGLLYRAVGAIVLAQGQLQDEAASVEAART
CEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHE
LDVATLDPEALRTAELGEAASVVAARGGVRAALLDLQHRFAAQPGGAVLDGRDIGTVICP
EEEEECCHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECCCCCCEEECC
KAQAKLFVTASPEVRAERRHRELIGRGEDVAYETVLADIRKRDERDSARAAAPLVQADDA
CCCCEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCE
VLLDTSALDIAQAFAAALAIVEARRAGR
EEEECHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA