Click here to switch to the map view.

The map label for this gene is cmpB [H]

Identifier: 154245032

GI number: 154245032

Start: 1245973

End: 1247061

Strand: Reverse

Name: cmpB [H]

Synonym: Xaut_1083

Alternate gene names: 154245032

Gene position: 1247061-1245973 (Counterclockwise)

Preceding gene: 154245033

Following gene: 154245031

Centisome position: 23.49

GC content: 63.73

Gene sequence:

>1089_bases
ATGTCGAATGCTGCCCAAAATACTGCATCTGCCTCCAGCGCGGCATCGGCGCAGAGGGGGGCCGTACTTTTCACACGGAT
CAACAAGGCGGCCAAATGGCTTGATGCCCTTGGCTTTGCCTGGGTGACGCCCATTCTCAAGATCGCCGCCGGCGACAATC
CGCGCGAGCAGCTTGGGGAAATCAAGCGCGTGCTGATCATTCCCCTGATCGGCATCGCCCTGTTCCTCGCCGCCTGGGGG
TTCCTGGCCCCGCGGGTCCACACCTCGCTCGGCGCGATTCCCGGCCCGCTGGCCGTCTGGCAGCAGGCCGGCGCGCTCCT
CGCCGACCATTCGGCGGAGCGGCAGAAGGAGGCCGAATTCTATCGCCGGCAGGACGAACGCAACGCCAAGCTCGTCGCCG
ACGGCAAGGCGGACCAGGTCAAGCAGCGGGCCTATACCGGCAAGCCGACCTACGTGGATCAGATTTTCACGTCTCTCGTC
ACGGTCGGGCTCGGCTTTCTCATTGCCACCGTGATCGCCGTTCCGCTCGGCATTGCGTCTGGCCTGTCGAAGACCTTCGC
GGGGGCGATCAATCCGCTCGTGCAGATCTTCAAGCCGGTGTCTCCGCTGGCCTGGCTTCCGATCGTGACCATGGTGGTTT
CCGCGCTTTATCTTGATCCCAGCGCGGCGGTTCCAAAATCCCTCGTCATTTCGGCGGTCACGGTGACCCTGTGCTCGCTG
TGGCCGACACTGATCAACACCGCTCTCGGCGTTGCCTCGATCGACAAGGATCTCGTCAATGTCGGCAAGGTGCTGCAATT
GTCGACCACGACCACCATCCGCAAGCTCGTGCTGCCGTCCTCGCTGCCGCTGATCTTCACCGGCCTGCGCCTGTCGCTGG
GCGTGGGCTGGATGGTGCTGATCGCCGCGGAGATGCTGGCGCAGAACCCCGGCCTCGGGAAGTTCGTCTGGGACGAGTTC
CAGAACGGATCCTCCGATTCGCTCGCCCGCATCATGGTGGCGGTGCTGACCATCGGCATCATCGGCTTCATGCTGGACCG
CATCATGTATGCGCTGCAGTCGGCCTTCACCTTCTCGGCCAACCGGTAG

Upstream 100 bases:

>100_bases
ATGGAAGGAAGTGAGATCGTCAATCGTTGATCGCTCCTCACGGGGCCGGCGCGCGACGCCGCTGGCCCCGACCGGACCTA
CAGCCAGATCAGGACGCATC

Downstream 100 bases:

>100_bases
GAGGGCGCCATGGCAATCCTCGACATCAGCGACCTCTGCAAGGGCTACGGCGAAGGCGACAAGCGCACGCAGGTGCTCAC
CAACATCAACCTCGAAGTGG

Product: binding-protein-dependent transport systems inner membrane component

Products: taurine [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 361

Protein sequence:

>362_residues
MSNAAQNTASASSAASAQRGAVLFTRINKAAKWLDALGFAWVTPILKIAAGDNPREQLGEIKRVLIIPLIGIALFLAAWG
FLAPRVHTSLGAIPGPLAVWQQAGALLADHSAERQKEAEFYRRQDERNAKLVADGKADQVKQRAYTGKPTYVDQIFTSLV
TVGLGFLIATVIAVPLGIASGLSKTFAGAINPLVQIFKPVSPLAWLPIVTMVVSALYLDPSAAVPKSLVISAVTVTLCSL
WPTLINTALGVASIDKDLVNVGKVLQLSTTTTIRKLVLPSSLPLIFTGLRLSLGVGWMVLIAAEMLAQNPGLGKFVWDEF
QNGSSDSLARIMVAVLTIGIIGFMLDRIMYALQSAFTFSANR

Sequences:

>Translated_362_residues
MSNAAQNTASASSAASAQRGAVLFTRINKAAKWLDALGFAWVTPILKIAAGDNPREQLGEIKRVLIIPLIGIALFLAAWG
FLAPRVHTSLGAIPGPLAVWQQAGALLADHSAERQKEAEFYRRQDERNAKLVADGKADQVKQRAYTGKPTYVDQIFTSLV
TVGLGFLIATVIAVPLGIASGLSKTFAGAINPLVQIFKPVSPLAWLPIVTMVVSALYLDPSAAVPKSLVISAVTVTLCSL
WPTLINTALGVASIDKDLVNVGKVLQLSTTTTIRKLVLPSSLPLIFTGLRLSLGVGWMVLIAAEMLAQNPGLGKFVWDEF
QNGSSDSLARIMVAVLTIGIIGFMLDRIMYALQSAFTFSANR
>Mature_361_residues
SNAAQNTASASSAASAQRGAVLFTRINKAAKWLDALGFAWVTPILKIAAGDNPREQLGEIKRVLIIPLIGIALFLAAWGF
LAPRVHTSLGAIPGPLAVWQQAGALLADHSAERQKEAEFYRRQDERNAKLVADGKADQVKQRAYTGKPTYVDQIFTSLVT
VGLGFLIATVIAVPLGIASGLSKTFAGAINPLVQIFKPVSPLAWLPIVTMVVSALYLDPSAAVPKSLVISAVTVTLCSLW
PTLINTALGVASIDKDLVNVGKVLQLSTTTTIRKLVLPSSLPLIFTGLRLSLGVGWMVLIAAEMLAQNPGLGKFVWDEFQ
NGSSDSLARIMVAVLTIGIIGFMLDRIMYALQSAFTFSANR

Specific function: Part of the ABC transporter complex CmpABCD involved in bicarbonate transport. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786564, Length=208, Percent_Identity=32.2115384615385, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI87081802, Length=153, Percent_Identity=29.4117647058824, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR005889 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38577; Mature: 38446

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNAAQNTASASSAASAQRGAVLFTRINKAAKWLDALGFAWVTPILKIAAGDNPREQLGE
CCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
IKRVLIIPLIGIALFLAAWGFLAPRVHTSLGAIPGPLAVWQQAGALLADHSAERQKEAEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHCCHHHHHHHHH
YRRQDERNAKLVADGKADQVKQRAYTGKPTYVDQIFTSLVTVGLGFLIATVIAVPLGIAS
HHHHHCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLSKTFAGAINPLVQIFKPVSPLAWLPIVTMVVSALYLDPSAAVPKSLVISAVTVTLCSL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
WPTLINTALGVASIDKDLVNVGKVLQLSTTTTIRKLVLPSSLPLIFTGLRLSLGVGWMVL
HHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
IAAEMLAQNPGLGKFVWDEFQNGSSDSLARIMVAVLTIGIIGFMLDRIMYALQSAFTFSA
HHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NR
CC
>Mature Secondary Structure 
SNAAQNTASASSAASAQRGAVLFTRINKAAKWLDALGFAWVTPILKIAAGDNPREQLGE
CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
IKRVLIIPLIGIALFLAAWGFLAPRVHTSLGAIPGPLAVWQQAGALLADHSAERQKEAEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHCCHHHHHHHHH
YRRQDERNAKLVADGKADQVKQRAYTGKPTYVDQIFTSLVTVGLGFLIATVIAVPLGIAS
HHHHHCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLSKTFAGAINPLVQIFKPVSPLAWLPIVTMVVSALYLDPSAAVPKSLVISAVTVTLCSL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
WPTLINTALGVASIDKDLVNVGKVLQLSTTTTIRKLVLPSSLPLIFTGLRLSLGVGWMVL
HHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
IAAEMLAQNPGLGKFVWDEFQNGSSDSLARIMVAVLTIGIIGFMLDRIMYALQSAFTFSA
HHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: taurine [Periplasm]; ATP; H2O [C]

Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA