Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is adhB [H]

Identifier: 154245020

GI number: 154245020

Start: 1228799

End: 1230898

Strand: Direct

Name: adhB [H]

Synonym: Xaut_1071

Alternate gene names: 154245020

Gene position: 1228799-1230898 (Clockwise)

Preceding gene: 154245018

Following gene: 154245024

Centisome position: 23.15

GC content: 68.1

Gene sequence:

>2100_bases
ATGAACGACGAAGGTACAGTCCGGCGCACGCCGCGATTGAAGACATTTGCGGTCGCCGCAGCCGGCGTCGCGGTGGTTGG
GGCGGCTGTGTTCTGGTGGATCGTCACCCCGCCGCGCATCGACGATGGCGGCCGTGCGCTGCCGCAGGCGGCCGCCCCGG
AGCTGGTGGCGCGCGGCAAATACATCGCCGAGCTGGGCGACTGCGTCGCCTGCCACACGAAGGCGGACGGGCAGCCCATG
GCCGGTGGTCGCGGACTGGAGACGCCGTTCGGCATGCTCTATTCCACCAACATCACCCCCGATCCGCAGACCGGCATCGG
CCGCTACAGCTTCGGCGCCTTCGATCGCGCCATGCGCCGGGGCGTGACCGCCGACGGCACCCACATGTACCCGGCCATGC
CCTACCCGTCTTACGCGAAGATGACGTCGGACGACATGTACGCGCTCTACGTCTACCTCATGAAGGGCGTGAAGCCGGTG
GACAGTCCCAACCGGCCGTCGGGGATCGGTTTCCCCTTCAACCAGCGCTGGACGCTCGCCTTCTGGAACGAGATGTTCCT
CGACAACCATCCCTTCGTCGCCGATGCGCGCAAGGGTGAGGTCTGGAATCGCGGCGCCTATCTGGTGCAGGGCCTCGGCC
ATTGCGGCGCCTGCCACACGCCGCGCGGCATCGGTTTCCAGGAACTCGCCATGGGCGATACCGGCGGCAGCGGCGACAAG
TTCCTTTCCGGCTCCAAGGTCGAGGAGTGGAACGCGGTCAACCTGCGCGGCCTCGGCGACGTGGATGACACGGTGGAGCT
GCTGAAGACCGGCCAGAACCGCTTCGGCACCGTCTCCGGCTCCATGACCGAGGTGATCCACAACTCCACCCAGAACTTCG
CCGACGCCGACCTCGTGGCCATCGCCACCTACCTTGATGGCCTGCCGTCCGGCCAGCCCCGGGCGCCGCGTCCTGCGAAG
TCTGGGGGCGTCGCCGCCGCCGTTCCCGAGGCCATGTTCACCACCCGCGGCGGGCTCGCCTATGCCCAGTTCTGCGCCGA
TTGCCACCGCCTGAACGGGGCCGGCGTCGCCAAGGTGTTCCCGCCGCTTGCCGGCAATCCGACCGTTGCGGCGAAGGACC
CTTCGACGCTGGTCCACATCACGCTGACCGGCTGGGCGACGGCTGAGACGCAGGCCCATTCCCGCGTCTTCACCATGCCC
GGCTTCGCCCGGCTGGGGGACGACGAGATCGCGGACATCCTCTCCTTCGTCCGCGCCAGCTGGGGCGGCAATGCCACGCC
GGTCACGGCCTCGGAGGTGAAGGCCGCCCGCGCGACGCTCGACCCGAAGGTGGACACGCGAGCGTTCGACACGCCGCGCA
TCGCGGATGTCCTGGGCGAGCCGAACGCAGCCCAGCTCGTGCGCGGCATGCGCCTCAACACCGAGACGCACACCCTGCTG
CCGAAGAATGTCGGCAACGTGCTGAACTGCTCGAGCTGCCACCTCAATGCCGGCACGGTGGCTGACGGCTCGCCCTATGT
GGGCGTCTCCGCCTTCTTCCCGAGCTATGCGCCGCGGGCCGGGCGGGAGATTACGCTGGAAGACCGCATCAACGGCTGCT
TCCTGCGCTCCATGAACGGCAAGCCGCTCGCCAAGGATGGCGATGACATGAAGGCCATGGTCGCCTATTTCGACTGGATG
AAGCGGGAGACCAAGCCCGAGGACAAGGTGGAGGGCCGCGGCGTCGGCAAGATCAGCCAGCAGATCAAGCCGGACACGGA
GAACGGCGCCAAGGTCTACGCCGCCCAGTGCGCCGTCTGCCACGGGTCCAGCGGAGAGGGCGTCAAGGACGCCGCCGGCG
CCTTCGTCTATCCCCCGCTGTGGGGCGACCAGTCCTTCAACATCGGGGCGGGCATGGCGCGCACCTACACGGCTGCAGCC
TTCGTGAAGCGCAACATGCCTATCGGCTTCCACGGCGGCTTCCCGCTGGGCCAGGGCGGCCTCACCGATCAGGAGGCGGT
GGATGTGGCCGAATACTTCAGCCACATGCCGCGACCGGACTTCGCGCCCAAGGTGAACGACTGGCCGAAGGACAAGAAGC
CGGCAGACGCCCGCTACTGA

Upstream 100 bases:

>100_bases
GCGCGAGAGCAGCCGCGAATCGCCGGAGGGATGGGATGCCATTTCTCCGGAAGGGTTTGTGTGCGCTTTTGAGACGCCGG
CCATGACAGGAGGTCGTTCC

Downstream 100 bases:

>100_bases
CCGCCTGAAGCAACGAGCGCCCGGGCCGTGCAGGGTCCGGGCGCTCGCGCATCCCCCCGTCGCGGGACGATGGACGGGCG
GAAAGGTGTTGAATTGGGAG

Product: gluconate 2-dehydrogenase (acceptor)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 699; Mature: 699

Protein sequence:

>699_residues
MNDEGTVRRTPRLKTFAVAAAGVAVVGAAVFWWIVTPPRIDDGGRALPQAAAPELVARGKYIAELGDCVACHTKADGQPM
AGGRGLETPFGMLYSTNITPDPQTGIGRYSFGAFDRAMRRGVTADGTHMYPAMPYPSYAKMTSDDMYALYVYLMKGVKPV
DSPNRPSGIGFPFNQRWTLAFWNEMFLDNHPFVADARKGEVWNRGAYLVQGLGHCGACHTPRGIGFQELAMGDTGGSGDK
FLSGSKVEEWNAVNLRGLGDVDDTVELLKTGQNRFGTVSGSMTEVIHNSTQNFADADLVAIATYLDGLPSGQPRAPRPAK
SGGVAAAVPEAMFTTRGGLAYAQFCADCHRLNGAGVAKVFPPLAGNPTVAAKDPSTLVHITLTGWATAETQAHSRVFTMP
GFARLGDDEIADILSFVRASWGGNATPVTASEVKAARATLDPKVDTRAFDTPRIADVLGEPNAAQLVRGMRLNTETHTLL
PKNVGNVLNCSSCHLNAGTVADGSPYVGVSAFFPSYAPRAGREITLEDRINGCFLRSMNGKPLAKDGDDMKAMVAYFDWM
KRETKPEDKVEGRGVGKISQQIKPDTENGAKVYAAQCAVCHGSSGEGVKDAAGAFVYPPLWGDQSFNIGAGMARTYTAAA
FVKRNMPIGFHGGFPLGQGGLTDQEAVDVAEYFSHMPRPDFAPKVNDWPKDKKPADARY

Sequences:

>Translated_699_residues
MNDEGTVRRTPRLKTFAVAAAGVAVVGAAVFWWIVTPPRIDDGGRALPQAAAPELVARGKYIAELGDCVACHTKADGQPM
AGGRGLETPFGMLYSTNITPDPQTGIGRYSFGAFDRAMRRGVTADGTHMYPAMPYPSYAKMTSDDMYALYVYLMKGVKPV
DSPNRPSGIGFPFNQRWTLAFWNEMFLDNHPFVADARKGEVWNRGAYLVQGLGHCGACHTPRGIGFQELAMGDTGGSGDK
FLSGSKVEEWNAVNLRGLGDVDDTVELLKTGQNRFGTVSGSMTEVIHNSTQNFADADLVAIATYLDGLPSGQPRAPRPAK
SGGVAAAVPEAMFTTRGGLAYAQFCADCHRLNGAGVAKVFPPLAGNPTVAAKDPSTLVHITLTGWATAETQAHSRVFTMP
GFARLGDDEIADILSFVRASWGGNATPVTASEVKAARATLDPKVDTRAFDTPRIADVLGEPNAAQLVRGMRLNTETHTLL
PKNVGNVLNCSSCHLNAGTVADGSPYVGVSAFFPSYAPRAGREITLEDRINGCFLRSMNGKPLAKDGDDMKAMVAYFDWM
KRETKPEDKVEGRGVGKISQQIKPDTENGAKVYAAQCAVCHGSSGEGVKDAAGAFVYPPLWGDQSFNIGAGMARTYTAAA
FVKRNMPIGFHGGFPLGQGGLTDQEAVDVAEYFSHMPRPDFAPKVNDWPKDKKPADARY
>Mature_699_residues
MNDEGTVRRTPRLKTFAVAAAGVAVVGAAVFWWIVTPPRIDDGGRALPQAAAPELVARGKYIAELGDCVACHTKADGQPM
AGGRGLETPFGMLYSTNITPDPQTGIGRYSFGAFDRAMRRGVTADGTHMYPAMPYPSYAKMTSDDMYALYVYLMKGVKPV
DSPNRPSGIGFPFNQRWTLAFWNEMFLDNHPFVADARKGEVWNRGAYLVQGLGHCGACHTPRGIGFQELAMGDTGGSGDK
FLSGSKVEEWNAVNLRGLGDVDDTVELLKTGQNRFGTVSGSMTEVIHNSTQNFADADLVAIATYLDGLPSGQPRAPRPAK
SGGVAAAVPEAMFTTRGGLAYAQFCADCHRLNGAGVAKVFPPLAGNPTVAAKDPSTLVHITLTGWATAETQAHSRVFTMP
GFARLGDDEIADILSFVRASWGGNATPVTASEVKAARATLDPKVDTRAFDTPRIADVLGEPNAAQLVRGMRLNTETHTLL
PKNVGNVLNCSSCHLNAGTVADGSPYVGVSAFFPSYAPRAGREITLEDRINGCFLRSMNGKPLAKDGDDMKAMVAYFDWM
KRETKPEDKVEGRGVGKISQQIKPDTENGAKVYAAQCAVCHGSSGEGVKDAAGAFVYPPLWGDQSFNIGAGMARTYTAAA
FVKRNMPIGFHGGFPLGQGGLTDQEAVDVAEYFSHMPRPDFAPKVNDWPKDKKPADARY

Specific function: Dehydration of primary alcohols (exception:methanol) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR014353 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 74755; Mature: 74755

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS51007 CYTC ; PS51008 MULTIHEME_CYTC L=rr

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDEGTVRRTPRLKTFAVAAAGVAVVGAAVFWWIVTPPRIDDGGRALPQAAAPELVARGK
CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHCHHHHHCCH
YIAELGDCVACHTKADGQPMAGGRGLETPFGMLYSTNITPDPQTGIGRYSFGAFDRAMRR
HHHHHCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHC
GVTADGTHMYPAMPYPSYAKMTSDDMYALYVYLMKGVKPVDSPNRPSGIGFPFNQRWTLA
CCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEE
FWNEMFLDNHPFVADARKGEVWNRGAYLVQGLGHCGACHTPRGIGFQELAMGDTGGSGDK
EHHHHHHCCCCCEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCC
FLSGSKVEEWNAVNLRGLGDVDDTVELLKTGQNRFGTVSGSMTEVIHNSTQNFADADLVA
CCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCEECCCHHHHHHHCCCCCCCHHHHHH
IATYLDGLPSGQPRAPRPAKSGGVAAAVPEAMFTTRGGLAYAQFCADCHRLNGAGVAKVF
HHHHHCCCCCCCCCCCCCCCCCCCHHHCCHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHC
PPLAGNPTVAAKDPSTLVHITLTGWATAETQAHSRVFTMPGFARLGDDEIADILSFVRAS
CCCCCCCCEEECCCCEEEEEEEECCCCCCCHHCCEEEECCCCHHCCCHHHHHHHHHHHHH
WGGNATPVTASEVKAARATLDPKVDTRAFDTPRIADVLGEPNAAQLVRGMRLNTETHTLL
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHCCCCCCCHHEEC
PKNVGNVLNCSSCHLNAGTVADGSPYVGVSAFFPSYAPRAGREITLEDRINGCFLRSMNG
CHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEHHCCCEEEEECCCC
KPLAKDGDDMKAMVAYFDWMKRETKPEDKVEGRGVGKISQQIKPDTENGAKVYAAQCAVC
CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHCCCCCCCCCEEEEEEEEEE
HGSSGEGVKDAAGAFVYPPLWGDQSFNIGAGMARTYTAAAFVKRNMPIGFHGGFPLGQGG
ECCCCCCCHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCC
LTDQEAVDVAEYFSHMPRPDFAPKVNDWPKDKKPADARY
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNDEGTVRRTPRLKTFAVAAAGVAVVGAAVFWWIVTPPRIDDGGRALPQAAAPELVARGK
CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHCHHHHHCCH
YIAELGDCVACHTKADGQPMAGGRGLETPFGMLYSTNITPDPQTGIGRYSFGAFDRAMRR
HHHHHCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHC
GVTADGTHMYPAMPYPSYAKMTSDDMYALYVYLMKGVKPVDSPNRPSGIGFPFNQRWTLA
CCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEE
FWNEMFLDNHPFVADARKGEVWNRGAYLVQGLGHCGACHTPRGIGFQELAMGDTGGSGDK
EHHHHHHCCCCCEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCC
FLSGSKVEEWNAVNLRGLGDVDDTVELLKTGQNRFGTVSGSMTEVIHNSTQNFADADLVA
CCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCEECCCHHHHHHHCCCCCCCHHHHHH
IATYLDGLPSGQPRAPRPAKSGGVAAAVPEAMFTTRGGLAYAQFCADCHRLNGAGVAKVF
HHHHHCCCCCCCCCCCCCCCCCCCHHHCCHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHC
PPLAGNPTVAAKDPSTLVHITLTGWATAETQAHSRVFTMPGFARLGDDEIADILSFVRAS
CCCCCCCCEEECCCCEEEEEEEECCCCCCCHHCCEEEECCCCHHCCCHHHHHHHHHHHHH
WGGNATPVTASEVKAARATLDPKVDTRAFDTPRIADVLGEPNAAQLVRGMRLNTETHTLL
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHCCCCCCCHHEEC
PKNVGNVLNCSSCHLNAGTVADGSPYVGVSAFFPSYAPRAGREITLEDRINGCFLRSMNG
CHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEHHCCCEEEEECCCC
KPLAKDGDDMKAMVAYFDWMKRETKPEDKVEGRGVGKISQQIKPDTENGAKVYAAQCAVC
CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHCCCCCCCCCEEEEEEEEEE
HGSSGEGVKDAAGAFVYPPLWGDQSFNIGAGMARTYTAAAFVKRNMPIGFHGGFPLGQGG
ECCCCCCCHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCC
LTDQEAVDVAEYFSHMPRPDFAPKVNDWPKDKKPADARY
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA