| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is adhB [H]
Identifier: 154245020
GI number: 154245020
Start: 1228799
End: 1230898
Strand: Direct
Name: adhB [H]
Synonym: Xaut_1071
Alternate gene names: 154245020
Gene position: 1228799-1230898 (Clockwise)
Preceding gene: 154245018
Following gene: 154245024
Centisome position: 23.15
GC content: 68.1
Gene sequence:
>2100_bases ATGAACGACGAAGGTACAGTCCGGCGCACGCCGCGATTGAAGACATTTGCGGTCGCCGCAGCCGGCGTCGCGGTGGTTGG GGCGGCTGTGTTCTGGTGGATCGTCACCCCGCCGCGCATCGACGATGGCGGCCGTGCGCTGCCGCAGGCGGCCGCCCCGG AGCTGGTGGCGCGCGGCAAATACATCGCCGAGCTGGGCGACTGCGTCGCCTGCCACACGAAGGCGGACGGGCAGCCCATG GCCGGTGGTCGCGGACTGGAGACGCCGTTCGGCATGCTCTATTCCACCAACATCACCCCCGATCCGCAGACCGGCATCGG CCGCTACAGCTTCGGCGCCTTCGATCGCGCCATGCGCCGGGGCGTGACCGCCGACGGCACCCACATGTACCCGGCCATGC CCTACCCGTCTTACGCGAAGATGACGTCGGACGACATGTACGCGCTCTACGTCTACCTCATGAAGGGCGTGAAGCCGGTG GACAGTCCCAACCGGCCGTCGGGGATCGGTTTCCCCTTCAACCAGCGCTGGACGCTCGCCTTCTGGAACGAGATGTTCCT CGACAACCATCCCTTCGTCGCCGATGCGCGCAAGGGTGAGGTCTGGAATCGCGGCGCCTATCTGGTGCAGGGCCTCGGCC ATTGCGGCGCCTGCCACACGCCGCGCGGCATCGGTTTCCAGGAACTCGCCATGGGCGATACCGGCGGCAGCGGCGACAAG TTCCTTTCCGGCTCCAAGGTCGAGGAGTGGAACGCGGTCAACCTGCGCGGCCTCGGCGACGTGGATGACACGGTGGAGCT GCTGAAGACCGGCCAGAACCGCTTCGGCACCGTCTCCGGCTCCATGACCGAGGTGATCCACAACTCCACCCAGAACTTCG CCGACGCCGACCTCGTGGCCATCGCCACCTACCTTGATGGCCTGCCGTCCGGCCAGCCCCGGGCGCCGCGTCCTGCGAAG TCTGGGGGCGTCGCCGCCGCCGTTCCCGAGGCCATGTTCACCACCCGCGGCGGGCTCGCCTATGCCCAGTTCTGCGCCGA TTGCCACCGCCTGAACGGGGCCGGCGTCGCCAAGGTGTTCCCGCCGCTTGCCGGCAATCCGACCGTTGCGGCGAAGGACC CTTCGACGCTGGTCCACATCACGCTGACCGGCTGGGCGACGGCTGAGACGCAGGCCCATTCCCGCGTCTTCACCATGCCC GGCTTCGCCCGGCTGGGGGACGACGAGATCGCGGACATCCTCTCCTTCGTCCGCGCCAGCTGGGGCGGCAATGCCACGCC GGTCACGGCCTCGGAGGTGAAGGCCGCCCGCGCGACGCTCGACCCGAAGGTGGACACGCGAGCGTTCGACACGCCGCGCA TCGCGGATGTCCTGGGCGAGCCGAACGCAGCCCAGCTCGTGCGCGGCATGCGCCTCAACACCGAGACGCACACCCTGCTG CCGAAGAATGTCGGCAACGTGCTGAACTGCTCGAGCTGCCACCTCAATGCCGGCACGGTGGCTGACGGCTCGCCCTATGT GGGCGTCTCCGCCTTCTTCCCGAGCTATGCGCCGCGGGCCGGGCGGGAGATTACGCTGGAAGACCGCATCAACGGCTGCT TCCTGCGCTCCATGAACGGCAAGCCGCTCGCCAAGGATGGCGATGACATGAAGGCCATGGTCGCCTATTTCGACTGGATG AAGCGGGAGACCAAGCCCGAGGACAAGGTGGAGGGCCGCGGCGTCGGCAAGATCAGCCAGCAGATCAAGCCGGACACGGA GAACGGCGCCAAGGTCTACGCCGCCCAGTGCGCCGTCTGCCACGGGTCCAGCGGAGAGGGCGTCAAGGACGCCGCCGGCG CCTTCGTCTATCCCCCGCTGTGGGGCGACCAGTCCTTCAACATCGGGGCGGGCATGGCGCGCACCTACACGGCTGCAGCC TTCGTGAAGCGCAACATGCCTATCGGCTTCCACGGCGGCTTCCCGCTGGGCCAGGGCGGCCTCACCGATCAGGAGGCGGT GGATGTGGCCGAATACTTCAGCCACATGCCGCGACCGGACTTCGCGCCCAAGGTGAACGACTGGCCGAAGGACAAGAAGC CGGCAGACGCCCGCTACTGA
Upstream 100 bases:
>100_bases GCGCGAGAGCAGCCGCGAATCGCCGGAGGGATGGGATGCCATTTCTCCGGAAGGGTTTGTGTGCGCTTTTGAGACGCCGG CCATGACAGGAGGTCGTTCC
Downstream 100 bases:
>100_bases CCGCCTGAAGCAACGAGCGCCCGGGCCGTGCAGGGTCCGGGCGCTCGCGCATCCCCCCGTCGCGGGACGATGGACGGGCG GAAAGGTGTTGAATTGGGAG
Product: gluconate 2-dehydrogenase (acceptor)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 699; Mature: 699
Protein sequence:
>699_residues MNDEGTVRRTPRLKTFAVAAAGVAVVGAAVFWWIVTPPRIDDGGRALPQAAAPELVARGKYIAELGDCVACHTKADGQPM AGGRGLETPFGMLYSTNITPDPQTGIGRYSFGAFDRAMRRGVTADGTHMYPAMPYPSYAKMTSDDMYALYVYLMKGVKPV DSPNRPSGIGFPFNQRWTLAFWNEMFLDNHPFVADARKGEVWNRGAYLVQGLGHCGACHTPRGIGFQELAMGDTGGSGDK FLSGSKVEEWNAVNLRGLGDVDDTVELLKTGQNRFGTVSGSMTEVIHNSTQNFADADLVAIATYLDGLPSGQPRAPRPAK SGGVAAAVPEAMFTTRGGLAYAQFCADCHRLNGAGVAKVFPPLAGNPTVAAKDPSTLVHITLTGWATAETQAHSRVFTMP GFARLGDDEIADILSFVRASWGGNATPVTASEVKAARATLDPKVDTRAFDTPRIADVLGEPNAAQLVRGMRLNTETHTLL PKNVGNVLNCSSCHLNAGTVADGSPYVGVSAFFPSYAPRAGREITLEDRINGCFLRSMNGKPLAKDGDDMKAMVAYFDWM KRETKPEDKVEGRGVGKISQQIKPDTENGAKVYAAQCAVCHGSSGEGVKDAAGAFVYPPLWGDQSFNIGAGMARTYTAAA FVKRNMPIGFHGGFPLGQGGLTDQEAVDVAEYFSHMPRPDFAPKVNDWPKDKKPADARY
Sequences:
>Translated_699_residues MNDEGTVRRTPRLKTFAVAAAGVAVVGAAVFWWIVTPPRIDDGGRALPQAAAPELVARGKYIAELGDCVACHTKADGQPM AGGRGLETPFGMLYSTNITPDPQTGIGRYSFGAFDRAMRRGVTADGTHMYPAMPYPSYAKMTSDDMYALYVYLMKGVKPV DSPNRPSGIGFPFNQRWTLAFWNEMFLDNHPFVADARKGEVWNRGAYLVQGLGHCGACHTPRGIGFQELAMGDTGGSGDK FLSGSKVEEWNAVNLRGLGDVDDTVELLKTGQNRFGTVSGSMTEVIHNSTQNFADADLVAIATYLDGLPSGQPRAPRPAK SGGVAAAVPEAMFTTRGGLAYAQFCADCHRLNGAGVAKVFPPLAGNPTVAAKDPSTLVHITLTGWATAETQAHSRVFTMP GFARLGDDEIADILSFVRASWGGNATPVTASEVKAARATLDPKVDTRAFDTPRIADVLGEPNAAQLVRGMRLNTETHTLL PKNVGNVLNCSSCHLNAGTVADGSPYVGVSAFFPSYAPRAGREITLEDRINGCFLRSMNGKPLAKDGDDMKAMVAYFDWM KRETKPEDKVEGRGVGKISQQIKPDTENGAKVYAAQCAVCHGSSGEGVKDAAGAFVYPPLWGDQSFNIGAGMARTYTAAA FVKRNMPIGFHGGFPLGQGGLTDQEAVDVAEYFSHMPRPDFAPKVNDWPKDKKPADARY >Mature_699_residues MNDEGTVRRTPRLKTFAVAAAGVAVVGAAVFWWIVTPPRIDDGGRALPQAAAPELVARGKYIAELGDCVACHTKADGQPM AGGRGLETPFGMLYSTNITPDPQTGIGRYSFGAFDRAMRRGVTADGTHMYPAMPYPSYAKMTSDDMYALYVYLMKGVKPV DSPNRPSGIGFPFNQRWTLAFWNEMFLDNHPFVADARKGEVWNRGAYLVQGLGHCGACHTPRGIGFQELAMGDTGGSGDK FLSGSKVEEWNAVNLRGLGDVDDTVELLKTGQNRFGTVSGSMTEVIHNSTQNFADADLVAIATYLDGLPSGQPRAPRPAK SGGVAAAVPEAMFTTRGGLAYAQFCADCHRLNGAGVAKVFPPLAGNPTVAAKDPSTLVHITLTGWATAETQAHSRVFTMP GFARLGDDEIADILSFVRASWGGNATPVTASEVKAARATLDPKVDTRAFDTPRIADVLGEPNAAQLVRGMRLNTETHTLL PKNVGNVLNCSSCHLNAGTVADGSPYVGVSAFFPSYAPRAGREITLEDRINGCFLRSMNGKPLAKDGDDMKAMVAYFDWM KRETKPEDKVEGRGVGKISQQIKPDTENGAKVYAAQCAVCHGSSGEGVKDAAGAFVYPPLWGDQSFNIGAGMARTYTAAA FVKRNMPIGFHGGFPLGQGGLTDQEAVDVAEYFSHMPRPDFAPKVNDWPKDKKPADARY
Specific function: Dehydration of primary alcohols (exception:methanol) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 cytochrome c domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR003088 - InterPro: IPR014353 [H]
Pfam domain/function: PF00034 Cytochrom_C [H]
EC number: NA
Molecular weight: Translated: 74755; Mature: 74755
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: PS51007 CYTC ; PS51008 MULTIHEME_CYTC L=rr
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDEGTVRRTPRLKTFAVAAAGVAVVGAAVFWWIVTPPRIDDGGRALPQAAAPELVARGK CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHCHHHHHCCH YIAELGDCVACHTKADGQPMAGGRGLETPFGMLYSTNITPDPQTGIGRYSFGAFDRAMRR HHHHHCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHC GVTADGTHMYPAMPYPSYAKMTSDDMYALYVYLMKGVKPVDSPNRPSGIGFPFNQRWTLA CCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEE FWNEMFLDNHPFVADARKGEVWNRGAYLVQGLGHCGACHTPRGIGFQELAMGDTGGSGDK EHHHHHHCCCCCEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCC FLSGSKVEEWNAVNLRGLGDVDDTVELLKTGQNRFGTVSGSMTEVIHNSTQNFADADLVA CCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCEECCCHHHHHHHCCCCCCCHHHHHH IATYLDGLPSGQPRAPRPAKSGGVAAAVPEAMFTTRGGLAYAQFCADCHRLNGAGVAKVF HHHHHCCCCCCCCCCCCCCCCCCCHHHCCHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHC PPLAGNPTVAAKDPSTLVHITLTGWATAETQAHSRVFTMPGFARLGDDEIADILSFVRAS CCCCCCCCEEECCCCEEEEEEEECCCCCCCHHCCEEEECCCCHHCCCHHHHHHHHHHHHH WGGNATPVTASEVKAARATLDPKVDTRAFDTPRIADVLGEPNAAQLVRGMRLNTETHTLL CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHCCCCCCCHHEEC PKNVGNVLNCSSCHLNAGTVADGSPYVGVSAFFPSYAPRAGREITLEDRINGCFLRSMNG CHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEHHCCCEEEEECCCC KPLAKDGDDMKAMVAYFDWMKRETKPEDKVEGRGVGKISQQIKPDTENGAKVYAAQCAVC CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHCCCCCCCCCEEEEEEEEEE HGSSGEGVKDAAGAFVYPPLWGDQSFNIGAGMARTYTAAAFVKRNMPIGFHGGFPLGQGG ECCCCCCCHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCC LTDQEAVDVAEYFSHMPRPDFAPKVNDWPKDKKPADARY CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNDEGTVRRTPRLKTFAVAAAGVAVVGAAVFWWIVTPPRIDDGGRALPQAAAPELVARGK CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHCHHHHHCCH YIAELGDCVACHTKADGQPMAGGRGLETPFGMLYSTNITPDPQTGIGRYSFGAFDRAMRR HHHHHCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHC GVTADGTHMYPAMPYPSYAKMTSDDMYALYVYLMKGVKPVDSPNRPSGIGFPFNQRWTLA CCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEE FWNEMFLDNHPFVADARKGEVWNRGAYLVQGLGHCGACHTPRGIGFQELAMGDTGGSGDK EHHHHHHCCCCCEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCC FLSGSKVEEWNAVNLRGLGDVDDTVELLKTGQNRFGTVSGSMTEVIHNSTQNFADADLVA CCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCEECCCHHHHHHHCCCCCCCHHHHHH IATYLDGLPSGQPRAPRPAKSGGVAAAVPEAMFTTRGGLAYAQFCADCHRLNGAGVAKVF HHHHHCCCCCCCCCCCCCCCCCCCHHHCCHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHC PPLAGNPTVAAKDPSTLVHITLTGWATAETQAHSRVFTMPGFARLGDDEIADILSFVRAS CCCCCCCCEEECCCCEEEEEEEECCCCCCCHHCCEEEECCCCHHCCCHHHHHHHHHHHHH WGGNATPVTASEVKAARATLDPKVDTRAFDTPRIADVLGEPNAAQLVRGMRLNTETHTLL CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHCCCCCCCHHEEC PKNVGNVLNCSSCHLNAGTVADGSPYVGVSAFFPSYAPRAGREITLEDRINGCFLRSMNG CHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEHHCCCEEEEECCCC KPLAKDGDDMKAMVAYFDWMKRETKPEDKVEGRGVGKISQQIKPDTENGAKVYAAQCAVC CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHCCCCCCCCCEEEEEEEEEE HGSSGEGVKDAAGAFVYPPLWGDQSFNIGAGMARTYTAAAFVKRNMPIGFHGGFPLGQGG ECCCCCCCHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCC LTDQEAVDVAEYFSHMPRPDFAPKVNDWPKDKKPADARY CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA