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The map label for this gene is yhhW [C]

Identifier: 154244974

GI number: 154244974

Start: 1176527

End: 1177225

Strand: Reverse

Name: yhhW [C]

Synonym: Xaut_1024

Alternate gene names: 154244974

Gene position: 1177225-1176527 (Counterclockwise)

Preceding gene: 154244975

Following gene: 154244973

Centisome position: 22.17

GC content: 68.67

Gene sequence:

>699_bases
ATGATCGAGCATCGCCCCTTCGACAGCCTCGGCAAGGCCAACCACGGCTGGCTCAACGCCCGGCACCACTTCTCCTTCGC
CAATTATTTCGATCCCGCCCGCCAGAGCCACGGCAAGCTCCGGGTGTGGAACGACGACGAGATCGCGCCGGGATCGGGCT
TTCCGCCCCACCCGCACGCCAACATGGAAATCATCACCTATGTCCGCGAGGGCGCCATCACCCACGAGGACAGCCTGGGC
AACCGCGGCCGCACCGTGGCCGGCGACATCCAGGTGATGAGCGCGGGGCGCGGCATCCGCCACTCCGAATACAATCTGGA
AAGCGGACCCACGCGCATCTTCCAGATCTGGATCGAGCCGGATCAGGCCGGCGGCGCACCCACCTGGGGCACCCGCCCCT
TCCCCAAGACCGACCGCTCGGGCCGCTTCGTGGCCCTGGCGAGCGGCATCGCGGGGGATGGGGACGCCCTGCCCATCCGC
GCCCATGCCCGGGTGCTCGGCGCCACGCTGAAGGCGGGCGAGACCATCGACTACGCCCCTTTGAGCGGCCTCAACACCTA
TCTGGTGCCGGCCACCGGCGCGGTGGAGGTCAACGGCCTGCGCCTCGACACCCGTGACGGCGCGGCCATCTCGAACGAGC
CCATCCTCACCATCACGGCTCTGGAAGACAGCGAGCTGGTGCTGGTGGAAGCGGCCTGA

Upstream 100 bases:

>100_bases
TCCAGACCCCGAAGTTGACGCGTTTTCGTCACGCGAACCGGTATCCACTTCGCTTGAAAACGCTTTGTTGCGGCCGCTTG
AACGGCCACGGAACACCGAC

Downstream 100 bases:

>100_bases
CGCCCTCTCCCCTCCCTTTCCGTTTCCCCCTTTCTCAAGGAGCCCACCATGGCCAAAGTCCTCGTCCTGTATTATTCCGC
CTACGGTCACATTGAGCAGA

Product: pirin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MIEHRPFDSLGKANHGWLNARHHFSFANYFDPARQSHGKLRVWNDDEIAPGSGFPPHPHANMEIITYVREGAITHEDSLG
NRGRTVAGDIQVMSAGRGIRHSEYNLESGPTRIFQIWIEPDQAGGAPTWGTRPFPKTDRSGRFVALASGIAGDGDALPIR
AHARVLGATLKAGETIDYAPLSGLNTYLVPATGAVEVNGLRLDTRDGAAISNEPILTITALEDSELVLVEAA

Sequences:

>Translated_232_residues
MIEHRPFDSLGKANHGWLNARHHFSFANYFDPARQSHGKLRVWNDDEIAPGSGFPPHPHANMEIITYVREGAITHEDSLG
NRGRTVAGDIQVMSAGRGIRHSEYNLESGPTRIFQIWIEPDQAGGAPTWGTRPFPKTDRSGRFVALASGIAGDGDALPIR
AHARVLGATLKAGETIDYAPLSGLNTYLVPATGAVEVNGLRLDTRDGAAISNEPILTITALEDSELVLVEAA
>Mature_232_residues
MIEHRPFDSLGKANHGWLNARHHFSFANYFDPARQSHGKLRVWNDDEIAPGSGFPPHPHANMEIITYVREGAITHEDSLG
NRGRTVAGDIQVMSAGRGIRHSEYNLESGPTRIFQIWIEPDQAGGAPTWGTRPFPKTDRSGRFVALASGIAGDGDALPIR
AHARVLGATLKAGETIDYAPLSGLNTYLVPATGAVEVNGLRLDTRDGAAISNEPILTITALEDSELVLVEAA

Specific function: Unknown

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Homo sapiens, GI66363697, Length=131, Percent_Identity=32.824427480916, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI4505823, Length=131, Percent_Identity=32.824427480916, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1789847, Length=231, Percent_Identity=40.6926406926407, Blast_Score=164, Evalue=5e-42,
Organism=Escherichia coli, GI1789493, Length=226, Percent_Identity=28.7610619469027, Blast_Score=93, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin [H]

EC number: NA

Molecular weight: Translated: 25049; Mature: 25049

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEHRPFDSLGKANHGWLNARHHFSFANYFDPARQSHGKLRVWNDDEIAPGSGFPPHPHA
CCCCCCCHHHCCCCCCEEECEEECCHHHHCCHHHHCCCEEEEECCCCCCCCCCCCCCCCC
NMEIITYVREGAITHEDSLGNRGRTVAGDIQVMSAGRGIRHSEYNLESGPTRIFQIWIEP
CEEEEEEEECCCCCCCCCCCCCCCEEECCEEEEECCCCCCCCCCCCCCCCEEEEEEEECC
DQAGGAPTWGTRPFPKTDRSGRFVALASGIAGDGDALPIRAHARVLGATLKAGETIDYAP
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEHHHEEEHHHHCCCCEECCCC
LSGLNTYLVPATGAVEVNGLRLDTRDGAAISNEPILTITALEDSELVLVEAA
CCCCCEEEEECCCEEEECCEEEECCCCCEECCCCEEEEEEECCCCEEEEEEC
>Mature Secondary Structure
MIEHRPFDSLGKANHGWLNARHHFSFANYFDPARQSHGKLRVWNDDEIAPGSGFPPHPHA
CCCCCCCHHHCCCCCCEEECEEECCHHHHCCHHHHCCCEEEEECCCCCCCCCCCCCCCCC
NMEIITYVREGAITHEDSLGNRGRTVAGDIQVMSAGRGIRHSEYNLESGPTRIFQIWIEP
CEEEEEEEECCCCCCCCCCCCCCCEEECCEEEEECCCCCCCCCCCCCCCCEEEEEEEECC
DQAGGAPTWGTRPFPKTDRSGRFVALASGIAGDGDALPIRAHARVLGATLKAGETIDYAP
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEHHHEEEHHHHCCCCEECCCC
LSGLNTYLVPATGAVEVNGLRLDTRDGAAISNEPILTITALEDSELVLVEAA
CCCCCEEEEECCCEEEECCEEEECCCCCEECCCCEEEEEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]