| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is mhpC1 [H]
Identifier: 154244885
GI number: 154244885
Start: 1055011
End: 1055877
Strand: Direct
Name: mhpC1 [H]
Synonym: Xaut_0935
Alternate gene names: 154244885
Gene position: 1055011-1055877 (Clockwise)
Preceding gene: 154244884
Following gene: 154244886
Centisome position: 19.87
GC content: 64.01
Gene sequence:
>867_bases ATGAGCCAGTCCTTCACCGAATCCGAAACCAGCCGCTTCGTCCGCGTCCGCGAAGGCGAGGGCGAACTCAATATCCACTA TAACGACTGCGATCCGGGCGATGCGCGCGAGACCGTGGTGATGCTGCACGGCTCCGGCCCCGGCGCTTCGGGCTGGGCCA ACTTCAACCGCAACATCACGCCGTTGGTGGAGGCGGGCTTCCGGGTGCTCCTCGTGGATTGCCCCGGCTGGAGCAAGAGC GACACCATCGTCAACACCGGCTCGCGCTCGAACCTGAATGCAAGGGTGCTCGCCGGCGTGGTGGATGCGCTCGGCCTCTC GCGCATCCATATCCTGGGCAATTCCATGGGCGGCCACAGCGCGGTGGCCTTCGCCCTCGACCATCCCGAGCGGGTGGGCA AGCTGGTGCTCATGGGTGGCGGCACGGGCGGCGTCAGCCCGTTCACCCCCATGCCCACCGAAGGCATCAAGCTGCTCAAT GGGCTCTACCGTTCGCCGACGATCGAAAACCTGAAGGCGATGATGAACGTCTTCGTCTTCGATCCCGGCGACCTTACCGA AGAGCTGTTCCAGGCGCGGCTCGACAACATGCTGAAGCGCCGGGATCATCTGGACAACTTCGTCGCGAGCTTTGCGGCCA ATCCCAAGCAATATCCCGATTTCGGCCCCCGCCTCGGCGAGATCTCGGCGCCGACGCTGGTCATCTGGGGCCGCAACGAC CGCTTCGTGCCCATGGATGTGGGCCTGCGCCTCATCGCCGGCATCCCGAAGTCGGAACTGCACGTCTTCAACAATTGCGG GCACTGGGCCCAGTGGGAGCACTGGAAGGCGTTCAACGCCCTCGTGCTCGAATTTCTTTCAAGGTGA
Upstream 100 bases:
>100_bases CTGCTGTGCGAGGTGCTTCACGCCTCCGAGCCGCCGGGCGGCGAGCCGCTGATCTATGTGAACGGCGCTTTCTGTCGCGT CAGCCCCCTGGAAGCGTGAG
Downstream 100 bases:
>100_bases TTTCAGATGAGCGCACAGCAGATCATCGAGGCGGCGGACCGGCTGTCCGACGCGACGCTCACGGGCGCGCCCTGCGACCC GGTGCGGGACCTGATCGGCC
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: 2-hydroxy-6-ketonona-2,4-diene-1,9-dioic acid 5,6-hydrolase 1; 2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioic acid 5,6-hydrolase 1; 2-hydroxy-6-oxonona-2,4-diene-1,9-dioic acid 5,6-hydrolase 1 [H]
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MSQSFTESETSRFVRVREGEGELNIHYNDCDPGDARETVVMLHGSGPGASGWANFNRNITPLVEAGFRVLLVDCPGWSKS DTIVNTGSRSNLNARVLAGVVDALGLSRIHILGNSMGGHSAVAFALDHPERVGKLVLMGGGTGGVSPFTPMPTEGIKLLN GLYRSPTIENLKAMMNVFVFDPGDLTEELFQARLDNMLKRRDHLDNFVASFAANPKQYPDFGPRLGEISAPTLVIWGRND RFVPMDVGLRLIAGIPKSELHVFNNCGHWAQWEHWKAFNALVLEFLSR
Sequences:
>Translated_288_residues MSQSFTESETSRFVRVREGEGELNIHYNDCDPGDARETVVMLHGSGPGASGWANFNRNITPLVEAGFRVLLVDCPGWSKS DTIVNTGSRSNLNARVLAGVVDALGLSRIHILGNSMGGHSAVAFALDHPERVGKLVLMGGGTGGVSPFTPMPTEGIKLLN GLYRSPTIENLKAMMNVFVFDPGDLTEELFQARLDNMLKRRDHLDNFVASFAANPKQYPDFGPRLGEISAPTLVIWGRND RFVPMDVGLRLIAGIPKSELHVFNNCGHWAQWEHWKAFNALVLEFLSR >Mature_287_residues SQSFTESETSRFVRVREGEGELNIHYNDCDPGDARETVVMLHGSGPGASGWANFNRNITPLVEAGFRVLLVDCPGWSKSD TIVNTGSRSNLNARVLAGVVDALGLSRIHILGNSMGGHSAVAFALDHPERVGKLVLMGGGTGGVSPFTPMPTEGIKLLNG LYRSPTIENLKAMMNVFVFDPGDLTEELFQARLDNMLKRRDHLDNFVASFAANPKQYPDFGPRLGEISAPTLVIWGRNDR FVPMDVGLRLIAGIPKSELHVFNNCGHWAQWEHWKAFNALVLEFLSR
Specific function: Catalyzes the cleavage of the C5-C6 bond of 2-hydroxy-6- oxononadienedioate and 2-hydroxy-6-oxononatrienedioate, a dienol ring fission product of the bacterial meta-cleavage pathway for degradation of phenylpropionic acid [H]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. MhpC family [H]
Homologues:
Organism=Escherichia coli, GI87081721, Length=286, Percent_Identity=72.027972027972, Blast_Score=439, Evalue=1e-124,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: 3.7.1.-
Molecular weight: Translated: 31644; Mature: 31513
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: PS00539 PYROKININ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSFTESETSRFVRVREGEGELNIHYNDCDPGDARETVVMLHGSGPGASGWANFNRNIT CCCCCCCHHHHHEEEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC PLVEAGFRVLLVDCPGWSKSDTIVNTGSRSNLNARVLAGVVDALGLSRIHILGNSMGGHS HHHHCCEEEEEEECCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCC AVAFALDHPERVGKLVLMGGGTGGVSPFTPMPTEGIKLLNGLYRSPTIENLKAMMNVFVF EEEEEECCHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHEEEE DPGDLTEELFQARLDNMLKRRDHLDNFVASFAANPKQYPDFGPRLGEISAPTLVIWGRND CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCC RFVPMDVGLRLIAGIPKSELHVFNNCGHWAQWEHWKAFNALVLEFLSR EEEEHHHCHHHHHCCCHHHHHEECCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure SQSFTESETSRFVRVREGEGELNIHYNDCDPGDARETVVMLHGSGPGASGWANFNRNIT CCCCCCHHHHHEEEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC PLVEAGFRVLLVDCPGWSKSDTIVNTGSRSNLNARVLAGVVDALGLSRIHILGNSMGGHS HHHHCCEEEEEEECCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCC AVAFALDHPERVGKLVLMGGGTGGVSPFTPMPTEGIKLLNGLYRSPTIENLKAMMNVFVF EEEEEECCHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHEEEE DPGDLTEELFQARLDNMLKRRDHLDNFVASFAANPKQYPDFGPRLGEISAPTLVIWGRND CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCC RFVPMDVGLRLIAGIPKSELHVFNNCGHWAQWEHWKAFNALVLEFLSR EEEEHHHCHHHHHCCCHHHHHEECCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA