| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154244872
Identifier: 154244872
GI number: 154244872
Start: 1039476
End: 1041191
Strand: Direct
Name: 154244872
Synonym: Xaut_0922
Alternate gene names: NA
Gene position: 1039476-1041191 (Clockwise)
Preceding gene: 154244871
Following gene: 154244873
Centisome position: 19.58
GC content: 66.61
Gene sequence:
>1716_bases GTGACGACCATTACCAATATCCACGCAACAGCGGAGAGCGATGGGAAGCTTCATCGCTCCATCAGCTGGACCGGCGCCTT CTGGGTGGCGAGCGGCGTTCCGGCGCTCGTGCTCTTCTCCATCGGCGGCATTGCCGGCACCACCGGCTCGCTCTCCTTTC TCGTCTGGGCCCTGTCCATCGGCATGGGCTTCATCCAGTCCTTCATCTATGCGGAGATCGCCGGCCTGTTCCCGAACAAG TCGGGCGGCGCCTCCATCTATGGCGCGGCGGCCTGGGTCCGCTACGTGAAGCTGGTGGCACCGCTCTCCGTGTGGTGCAA CTGGTTCGCCTGGAGCCCGGTGCTCTCGCTCGGCTGCTCCATCGCGGCGGCCTACATCCTGAATGCGTTCGCCCCCGTCC CGGCGCTCAACAGCCCCGAGGTGGCGCAATGGCTCGCCGCCCATGGCGCGAGCCTTGCCGGCACCGACGTGGAGAAGGCC GCCGCCGCGGTGGCGGCGCTGACCCCCGCCGTGCGGGACTGGACCCTGTTCTCCCACGCCATCGGTCCCGTCTCCTTCTC GTTGAATGCGTCCTTCTTTGTGGGCGCGACGCTGATGCTGGTGGTGTTCGCCATCCAGCACCGGGGCATCCTCGGCACCG CCAGCGTGCAGAAGTGGATCGGCCTGTCGGTCATCGTGCCCATGGTGATCGTCGGCCTGGTGCCGATCCTCACCGGCAAG GTGGACTGGGCGAACTTCTCGCCACTGGTGCCGCTCGCAGCCGCCGGCGCGGCCGATCCCGGCAGCTGGGACATCCCCGG CTGGACGCTGGTGCTCGGCGGCCTGTTCATCGCCGCCTGGTCCACCTACGGCTTCGAGACGGCGGTCTGCTACACGAGCG AGTTCCGCAATCCCGAGAAGGACACCTTCAAGGCCATCTTCTATTCGGGCCTGCTGTGCCTCGCGCTGTTCATCCTCGTG CCCTTCACCTTCCAGGGCGTGCTCGGGCTCTCGGGTATGCTCGACCCCGCCATCGTCGATGGCTCCGGGGTGGCGCAGGC GCTGGCCCACATGGTGGGCGGCGGCAAGATCATCGAGAGCGCCCTCGTGATGTTGATGATCCTCGCCCTCGTGCTGTCCA TCATGACCGCCATGGCGGGCTCCTCGCGCACCCTCTACCAGGGCGCCGTGGACGGCTGGCTGCCGCGCTTCCTCGACCAT GTGAACGAGCATGGTGCGCCGACGCGGGCTATGTGGACCGACCTGTGGTTCAACCTCGTGCTGCTCGCCATCGCCTGCGC GGACGCCACCAGCTTCTTCTTCGTGCTGGCGGTGGCCAATGTCGGCTACATCATCTTCAACTTCCTGAACCTCAATTCGG GCTGGATCCACCGCATCGATTCCGGCCATGTGGCGCGGCCCTACAAGGCGCCCACCATCCTGCTGGTGCTGGGCACCGTC TTCGCCTTTGCCAATGCCGTCTTCATGGGCGCCGGCGCGAAGGTGTGGAACCCGGTGGCCCTGTGGGCGGGGCTCATCAC CGCCGCGCTCATCATCCCGGTCTTCATCTACCGGCACTACGTGCAGGACGGTGGCAAGTTCCCGCACGAGACCTTCGAGG ACCTGCAGGTCGGCGACGGGACGAAGACGCAGAAGCGCGCCGGCATCCTGCCCTATCTCGCGCTCATCGCCGGCATCGTC GTGGTGCTCGTCTCCAACTGGCTGTTCCACCTCTGA
Upstream 100 bases:
>100_bases CAACAGTTTCACGAAACAAGCGGTCTCACCAAACAAAAGCGTCCGGACGGGACGGCGGCGCAGTCTGCTTCACCCGCAAC GCCGGACAAGGGAGGACAAC
Downstream 100 bases:
>100_bases TCTGTTGAAGGATTTCCCAAGATGACCCAGGCTACTCCCGCCTATTCCCGCCTGTCGGTGCTGTCGGACCGGCATCGTGC GCTCGGCACCGGATTCGAGG
Product: amino acid permease-associated protein
Products: NA
Alternate protein names: Amino Acid Transporter; Amino Acid Permease; Amino Acid Transporter Permease Protein; Amino Acid Permease Superfamily; Multi-Sensor Hybrid Histidine Kinase; Amino Acid Transporter-Like Protein; Dimethylamine Permease; Amino Acid Permease-Like Protein
Number of amino acids: Translated: 571; Mature: 570
Protein sequence:
>571_residues MTTITNIHATAESDGKLHRSISWTGAFWVASGVPALVLFSIGGIAGTTGSLSFLVWALSIGMGFIQSFIYAEIAGLFPNK SGGASIYGAAAWVRYVKLVAPLSVWCNWFAWSPVLSLGCSIAAAYILNAFAPVPALNSPEVAQWLAAHGASLAGTDVEKA AAAVAALTPAVRDWTLFSHAIGPVSFSLNASFFVGATLMLVVFAIQHRGILGTASVQKWIGLSVIVPMVIVGLVPILTGK VDWANFSPLVPLAAAGAADPGSWDIPGWTLVLGGLFIAAWSTYGFETAVCYTSEFRNPEKDTFKAIFYSGLLCLALFILV PFTFQGVLGLSGMLDPAIVDGSGVAQALAHMVGGGKIIESALVMLMILALVLSIMTAMAGSSRTLYQGAVDGWLPRFLDH VNEHGAPTRAMWTDLWFNLVLLAIACADATSFFFVLAVANVGYIIFNFLNLNSGWIHRIDSGHVARPYKAPTILLVLGTV FAFANAVFMGAGAKVWNPVALWAGLITAALIIPVFIYRHYVQDGGKFPHETFEDLQVGDGTKTQKRAGILPYLALIAGIV VVLVSNWLFHL
Sequences:
>Translated_571_residues MTTITNIHATAESDGKLHRSISWTGAFWVASGVPALVLFSIGGIAGTTGSLSFLVWALSIGMGFIQSFIYAEIAGLFPNK SGGASIYGAAAWVRYVKLVAPLSVWCNWFAWSPVLSLGCSIAAAYILNAFAPVPALNSPEVAQWLAAHGASLAGTDVEKA AAAVAALTPAVRDWTLFSHAIGPVSFSLNASFFVGATLMLVVFAIQHRGILGTASVQKWIGLSVIVPMVIVGLVPILTGK VDWANFSPLVPLAAAGAADPGSWDIPGWTLVLGGLFIAAWSTYGFETAVCYTSEFRNPEKDTFKAIFYSGLLCLALFILV PFTFQGVLGLSGMLDPAIVDGSGVAQALAHMVGGGKIIESALVMLMILALVLSIMTAMAGSSRTLYQGAVDGWLPRFLDH VNEHGAPTRAMWTDLWFNLVLLAIACADATSFFFVLAVANVGYIIFNFLNLNSGWIHRIDSGHVARPYKAPTILLVLGTV FAFANAVFMGAGAKVWNPVALWAGLITAALIIPVFIYRHYVQDGGKFPHETFEDLQVGDGTKTQKRAGILPYLALIAGIV VVLVSNWLFHL >Mature_570_residues TTITNIHATAESDGKLHRSISWTGAFWVASGVPALVLFSIGGIAGTTGSLSFLVWALSIGMGFIQSFIYAEIAGLFPNKS GGASIYGAAAWVRYVKLVAPLSVWCNWFAWSPVLSLGCSIAAAYILNAFAPVPALNSPEVAQWLAAHGASLAGTDVEKAA AAVAALTPAVRDWTLFSHAIGPVSFSLNASFFVGATLMLVVFAIQHRGILGTASVQKWIGLSVIVPMVIVGLVPILTGKV DWANFSPLVPLAAAGAADPGSWDIPGWTLVLGGLFIAAWSTYGFETAVCYTSEFRNPEKDTFKAIFYSGLLCLALFILVP FTFQGVLGLSGMLDPAIVDGSGVAQALAHMVGGGKIIESALVMLMILALVLSIMTAMAGSSRTLYQGAVDGWLPRFLDHV NEHGAPTRAMWTDLWFNLVLLAIACADATSFFFVLAVANVGYIIFNFLNLNSGWIHRIDSGHVARPYKAPTILLVLGTVF AFANAVFMGAGAKVWNPVALWAGLITAALIIPVFIYRHYVQDGGKFPHETFEDLQVGDGTKTQKRAGILPYLALIAGIVV VLVSNWLFHL
Specific function: Unknown
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60641; Mature: 60509
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTITNIHATAESDGKLHRSISWTGAFWVASGVPALVLFSIGGIAGTTGSLSFLVWALSI CCCEEEEEECCCCCCCEEEEEECCHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHH GMGFIQSFIYAEIAGLFPNKSGGASIYGAAAWVRYVKLVAPLSVWCNWFAWSPVLSLGCS HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAAAYILNAFAPVPALNSPEVAQWLAAHGASLAGTDVEKAAAAVAALTPAVRDWTLFSHA HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IGPVSFSLNASFFVGATLMLVVFAIQHRGILGTASVQKWIGLSVIVPMVIVGLVPILTGK CCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC VDWANFSPLVPLAAAGAADPGSWDIPGWTLVLGGLFIAAWSTYGFETAVCYTSEFRNPEK CCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCH DTFKAIFYSGLLCLALFILVPFTFQGVLGLSGMLDPAIVDGSGVAQALAHMVGGGKIIES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHCCHHHHHH ALVMLMILALVLSIMTAMAGSSRTLYQGAVDGWLPRFLDHVNEHGAPTRAMWTDLWFNLV HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LLAIACADATSFFFVLAVANVGYIIFNFLNLNSGWIHRIDSGHVARPYKAPTILLVLGTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHH FAFANAVFMGAGAKVWNPVALWAGLITAALIIPVFIYRHYVQDGGKFPHETFEDLQVGDG HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCC TKTQKRAGILPYLALIAGIVVVLVSNWLFHL CCHHHHCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTITNIHATAESDGKLHRSISWTGAFWVASGVPALVLFSIGGIAGTTGSLSFLVWALSI CCEEEEEECCCCCCCEEEEEECCHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHH GMGFIQSFIYAEIAGLFPNKSGGASIYGAAAWVRYVKLVAPLSVWCNWFAWSPVLSLGCS HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAAAYILNAFAPVPALNSPEVAQWLAAHGASLAGTDVEKAAAAVAALTPAVRDWTLFSHA HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IGPVSFSLNASFFVGATLMLVVFAIQHRGILGTASVQKWIGLSVIVPMVIVGLVPILTGK CCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC VDWANFSPLVPLAAAGAADPGSWDIPGWTLVLGGLFIAAWSTYGFETAVCYTSEFRNPEK CCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCH DTFKAIFYSGLLCLALFILVPFTFQGVLGLSGMLDPAIVDGSGVAQALAHMVGGGKIIES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHCCHHHHHH ALVMLMILALVLSIMTAMAGSSRTLYQGAVDGWLPRFLDHVNEHGAPTRAMWTDLWFNLV HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LLAIACADATSFFFVLAVANVGYIIFNFLNLNSGWIHRIDSGHVARPYKAPTILLVLGTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHH FAFANAVFMGAGAKVWNPVALWAGLITAALIIPVFIYRHYVQDGGKFPHETFEDLQVGDG HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCC TKTQKRAGILPYLALIAGIVVVLVSNWLFHL CCHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA