Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is 154244872

Identifier: 154244872

GI number: 154244872

Start: 1039476

End: 1041191

Strand: Direct

Name: 154244872

Synonym: Xaut_0922

Alternate gene names: NA

Gene position: 1039476-1041191 (Clockwise)

Preceding gene: 154244871

Following gene: 154244873

Centisome position: 19.58

GC content: 66.61

Gene sequence:

>1716_bases
GTGACGACCATTACCAATATCCACGCAACAGCGGAGAGCGATGGGAAGCTTCATCGCTCCATCAGCTGGACCGGCGCCTT
CTGGGTGGCGAGCGGCGTTCCGGCGCTCGTGCTCTTCTCCATCGGCGGCATTGCCGGCACCACCGGCTCGCTCTCCTTTC
TCGTCTGGGCCCTGTCCATCGGCATGGGCTTCATCCAGTCCTTCATCTATGCGGAGATCGCCGGCCTGTTCCCGAACAAG
TCGGGCGGCGCCTCCATCTATGGCGCGGCGGCCTGGGTCCGCTACGTGAAGCTGGTGGCACCGCTCTCCGTGTGGTGCAA
CTGGTTCGCCTGGAGCCCGGTGCTCTCGCTCGGCTGCTCCATCGCGGCGGCCTACATCCTGAATGCGTTCGCCCCCGTCC
CGGCGCTCAACAGCCCCGAGGTGGCGCAATGGCTCGCCGCCCATGGCGCGAGCCTTGCCGGCACCGACGTGGAGAAGGCC
GCCGCCGCGGTGGCGGCGCTGACCCCCGCCGTGCGGGACTGGACCCTGTTCTCCCACGCCATCGGTCCCGTCTCCTTCTC
GTTGAATGCGTCCTTCTTTGTGGGCGCGACGCTGATGCTGGTGGTGTTCGCCATCCAGCACCGGGGCATCCTCGGCACCG
CCAGCGTGCAGAAGTGGATCGGCCTGTCGGTCATCGTGCCCATGGTGATCGTCGGCCTGGTGCCGATCCTCACCGGCAAG
GTGGACTGGGCGAACTTCTCGCCACTGGTGCCGCTCGCAGCCGCCGGCGCGGCCGATCCCGGCAGCTGGGACATCCCCGG
CTGGACGCTGGTGCTCGGCGGCCTGTTCATCGCCGCCTGGTCCACCTACGGCTTCGAGACGGCGGTCTGCTACACGAGCG
AGTTCCGCAATCCCGAGAAGGACACCTTCAAGGCCATCTTCTATTCGGGCCTGCTGTGCCTCGCGCTGTTCATCCTCGTG
CCCTTCACCTTCCAGGGCGTGCTCGGGCTCTCGGGTATGCTCGACCCCGCCATCGTCGATGGCTCCGGGGTGGCGCAGGC
GCTGGCCCACATGGTGGGCGGCGGCAAGATCATCGAGAGCGCCCTCGTGATGTTGATGATCCTCGCCCTCGTGCTGTCCA
TCATGACCGCCATGGCGGGCTCCTCGCGCACCCTCTACCAGGGCGCCGTGGACGGCTGGCTGCCGCGCTTCCTCGACCAT
GTGAACGAGCATGGTGCGCCGACGCGGGCTATGTGGACCGACCTGTGGTTCAACCTCGTGCTGCTCGCCATCGCCTGCGC
GGACGCCACCAGCTTCTTCTTCGTGCTGGCGGTGGCCAATGTCGGCTACATCATCTTCAACTTCCTGAACCTCAATTCGG
GCTGGATCCACCGCATCGATTCCGGCCATGTGGCGCGGCCCTACAAGGCGCCCACCATCCTGCTGGTGCTGGGCACCGTC
TTCGCCTTTGCCAATGCCGTCTTCATGGGCGCCGGCGCGAAGGTGTGGAACCCGGTGGCCCTGTGGGCGGGGCTCATCAC
CGCCGCGCTCATCATCCCGGTCTTCATCTACCGGCACTACGTGCAGGACGGTGGCAAGTTCCCGCACGAGACCTTCGAGG
ACCTGCAGGTCGGCGACGGGACGAAGACGCAGAAGCGCGCCGGCATCCTGCCCTATCTCGCGCTCATCGCCGGCATCGTC
GTGGTGCTCGTCTCCAACTGGCTGTTCCACCTCTGA

Upstream 100 bases:

>100_bases
CAACAGTTTCACGAAACAAGCGGTCTCACCAAACAAAAGCGTCCGGACGGGACGGCGGCGCAGTCTGCTTCACCCGCAAC
GCCGGACAAGGGAGGACAAC

Downstream 100 bases:

>100_bases
TCTGTTGAAGGATTTCCCAAGATGACCCAGGCTACTCCCGCCTATTCCCGCCTGTCGGTGCTGTCGGACCGGCATCGTGC
GCTCGGCACCGGATTCGAGG

Product: amino acid permease-associated protein

Products: NA

Alternate protein names: Amino Acid Transporter; Amino Acid Permease; Amino Acid Transporter Permease Protein; Amino Acid Permease Superfamily; Multi-Sensor Hybrid Histidine Kinase; Amino Acid Transporter-Like Protein; Dimethylamine Permease; Amino Acid Permease-Like Protein

Number of amino acids: Translated: 571; Mature: 570

Protein sequence:

>571_residues
MTTITNIHATAESDGKLHRSISWTGAFWVASGVPALVLFSIGGIAGTTGSLSFLVWALSIGMGFIQSFIYAEIAGLFPNK
SGGASIYGAAAWVRYVKLVAPLSVWCNWFAWSPVLSLGCSIAAAYILNAFAPVPALNSPEVAQWLAAHGASLAGTDVEKA
AAAVAALTPAVRDWTLFSHAIGPVSFSLNASFFVGATLMLVVFAIQHRGILGTASVQKWIGLSVIVPMVIVGLVPILTGK
VDWANFSPLVPLAAAGAADPGSWDIPGWTLVLGGLFIAAWSTYGFETAVCYTSEFRNPEKDTFKAIFYSGLLCLALFILV
PFTFQGVLGLSGMLDPAIVDGSGVAQALAHMVGGGKIIESALVMLMILALVLSIMTAMAGSSRTLYQGAVDGWLPRFLDH
VNEHGAPTRAMWTDLWFNLVLLAIACADATSFFFVLAVANVGYIIFNFLNLNSGWIHRIDSGHVARPYKAPTILLVLGTV
FAFANAVFMGAGAKVWNPVALWAGLITAALIIPVFIYRHYVQDGGKFPHETFEDLQVGDGTKTQKRAGILPYLALIAGIV
VVLVSNWLFHL

Sequences:

>Translated_571_residues
MTTITNIHATAESDGKLHRSISWTGAFWVASGVPALVLFSIGGIAGTTGSLSFLVWALSIGMGFIQSFIYAEIAGLFPNK
SGGASIYGAAAWVRYVKLVAPLSVWCNWFAWSPVLSLGCSIAAAYILNAFAPVPALNSPEVAQWLAAHGASLAGTDVEKA
AAAVAALTPAVRDWTLFSHAIGPVSFSLNASFFVGATLMLVVFAIQHRGILGTASVQKWIGLSVIVPMVIVGLVPILTGK
VDWANFSPLVPLAAAGAADPGSWDIPGWTLVLGGLFIAAWSTYGFETAVCYTSEFRNPEKDTFKAIFYSGLLCLALFILV
PFTFQGVLGLSGMLDPAIVDGSGVAQALAHMVGGGKIIESALVMLMILALVLSIMTAMAGSSRTLYQGAVDGWLPRFLDH
VNEHGAPTRAMWTDLWFNLVLLAIACADATSFFFVLAVANVGYIIFNFLNLNSGWIHRIDSGHVARPYKAPTILLVLGTV
FAFANAVFMGAGAKVWNPVALWAGLITAALIIPVFIYRHYVQDGGKFPHETFEDLQVGDGTKTQKRAGILPYLALIAGIV
VVLVSNWLFHL
>Mature_570_residues
TTITNIHATAESDGKLHRSISWTGAFWVASGVPALVLFSIGGIAGTTGSLSFLVWALSIGMGFIQSFIYAEIAGLFPNKS
GGASIYGAAAWVRYVKLVAPLSVWCNWFAWSPVLSLGCSIAAAYILNAFAPVPALNSPEVAQWLAAHGASLAGTDVEKAA
AAVAALTPAVRDWTLFSHAIGPVSFSLNASFFVGATLMLVVFAIQHRGILGTASVQKWIGLSVIVPMVIVGLVPILTGKV
DWANFSPLVPLAAAGAADPGSWDIPGWTLVLGGLFIAAWSTYGFETAVCYTSEFRNPEKDTFKAIFYSGLLCLALFILVP
FTFQGVLGLSGMLDPAIVDGSGVAQALAHMVGGGKIIESALVMLMILALVLSIMTAMAGSSRTLYQGAVDGWLPRFLDHV
NEHGAPTRAMWTDLWFNLVLLAIACADATSFFFVLAVANVGYIIFNFLNLNSGWIHRIDSGHVARPYKAPTILLVLGTVF
AFANAVFMGAGAKVWNPVALWAGLITAALIIPVFIYRHYVQDGGKFPHETFEDLQVGDGTKTQKRAGILPYLALIAGIVV
VLVSNWLFHL

Specific function: Unknown

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60641; Mature: 60509

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTITNIHATAESDGKLHRSISWTGAFWVASGVPALVLFSIGGIAGTTGSLSFLVWALSI
CCEEEEEECCCCCCCEEEEEECCHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHH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CCHHHHCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA