| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is chiA [H]
Identifier: 154244829
GI number: 154244829
Start: 977955
End: 980210
Strand: Direct
Name: chiA [H]
Synonym: Xaut_0879
Alternate gene names: 154244829
Gene position: 977955-980210 (Clockwise)
Preceding gene: 154244828
Following gene: 154244831
Centisome position: 18.42
GC content: 66.8
Gene sequence:
>2256_bases ATGGCAACGCGAACAATCACATGGGCATGGGGCGCGCAGGAGGTCGTCAGCTTCGACCCCGCCACGGATGTCCTTGATTT CGGCTGGCTGAACGCCAGCGATTTCACCATCACCGAAGTCAACGGCTCGGTGGTCATCGCGCTGCCGGCCAATGCGCACA GCTACACCCTCGAAGGGGTCAGCCTCTCCGACCTGTCGCTGGCGAACATCAGCGCGTTCGATGCCTCGGTGTTCGCGCAA TGGAGCGCCGCCATCGCGGCCGACGGCGCCACCACGCCCGTCGCCGGCACCCTTTTCGCGCTCTCCGCCGCGCGCGACAC CGACACGGTGCTGAGCTTCAACCCCGCCGCGGACAAGCTGGATTTCAGCGGCCTGTCGGCGTCTGATTTCTCCATCGCCG AGGTCAACGGTTCGGTGGTGATCTACCTTTCGGCCGAGCGCCAGACCTACATCCTCGATGGTGTGACGCTCTCCCAGCTT TCCCTGTCCAGCATCGCCAGCCAGGATGCCGCCGTGCTCGCCGAATGGAGCCAGGCGCTGGCGAGCCCGGCGGGCAGCAG TGCCGCGCCAACGTCCGGCGGCGGTGAGGCCGTCACCACGACCCTCGGCTGGAACTGGAACACGCAGACCGTGCTGGCCT TCGATCCCGCCCGGGACAAGATCGATTTCGGCTGGCTGACGCCGCAGGACTTCTCCGTCGTCGAGCTGAACGGCTCCGTG GTGATCCTGATGCCCGGCGCGCAGCAGAGCTATACGCTGGAGGGCGTGACCCTCGCCGAGCTTTCGGCGGCGAACATCAC CGCACGCAGCGCCGTGGTGCTTGAGGAATGGGCAACGCTCCTGTCCGGCGCGAGCGGATCGGGGGGCGGATCGGGCGGCG GGTCCGGCAGCACTCTTCCCGTCATCGAGGCGTCGGCCTGGATCGATGCCAAGGCCTATGTGGCTGGCGATCTGGTGAGC GTCGGCCACCTCGTCTACCAGGCCAATTGGTGGACGCTGGGCACCGATCCCACAAGCGACCACGGCGCCGTGGGCACGGG CCATGTGTGGAGCGTCGTCGGCTATGCCGATCTCACGCCGGTGGCCCCCGACGCGCCGGACGGCCTGCACCTTTTGACCA CCACCGAGACCTCCGCGACCCTCACCTGGGACGCGGCGGAGGTGTCGGGCGTGGGCACGGTGACAGGCTATGCCATCTAT CGCGATGGCGAGCTGGTGGGCACCACCACCGACCTGAGCTTCAAGGTCTCGGGCCTTGTGGCGGACACCACCTATCATTT CTCCGTGGTGGCCGTGGACGAGGCCGGCACCTCGCCCGCCGCCACCCCCATCGCGGTGACCACCGACGCCCCCGGCACCG ATGCCGCCGACCAGCAGCATTTCTCGCCCTATTTCGAGATGTGGCTGCCCTCCAGCCAGAACCTGGTGCAGACGGTGGAG GATGTGGGGCTCACCGCGGTCACCCTCGCCTTCGTGCTGGGCACGGGGCCGGACCAGATCGGCTGGGGCGGTCTCGGCTC CATCGACAACGACACCCTGGCCAACGGCACCACCATCTCCTCCATGGTGGCGGCGCTGCAGCAGAACGGGGTCGAGGTCA CCATCTCCTTCGGCGGCGGCTATGGCCAGGAGCCGGCGCTGTCCTTCACCAACGTCGCGCAGCTGACCGCCGCCTACCAG TCGGTGATGGACAAGTACAACGTCACCTCCCTCGACTTCGACATCGAGGCCGACGCGCTGACCAATACGGCGGCAAGCCA CCTGCGCAACGAGGCCCTGGTGGCGCTGGAACAGGCCAACCCCGACCTCACAGTCTCCTTCACCCTGCCGGCGCTGCCCA CGGGGCTGAACCAGGCCGGGCTGGACCTTTTGGCCCAGGCCAAGGCGGACGGGGTCGAAATCGACACCGTGAACATCATG GTGATGAATTACGGCGCCTATTACGACAGCGGCGACATGGGGAAGGATGCCATCGACGCCGCCGAGGCCACCATCGCGCA GCTGCACCAGCTGGGGCTCGATGCCAAGGTCGCGATCACCCCCATGATCGGCCAGAACGACGTTCCCGGCGAGGTCTTCA CCCTGGACGATGCCCGCCAATTGCTGGATTACGCCGAGGGCAATGACCACATCGCCTATATCGCCATGTGGTCGCTGGGC CGCGACCATGGCGATGACGTGGGCCACCTGACCGAGACCAGCAGCGGCGTCGCCCAGCATGACTACGACTTCGCCAAGAT CTTCTCCATGGTGTGA
Upstream 100 bases:
>100_bases TTATTATGGCGTGCGGAGATGAACTGCACAGCTTTCCCTTGCGGTCGCGTTCGCCATGTGCACCCTATCGGGCAGTGTTC CCGACGGGGCGGACGGCGAC
Downstream 100 bases:
>100_bases GCACCTGTCGGGAACTCAAAAGGCCATGACGCTGAGAATGCGCCTTCGAGGGCTCGCGCCGCCCAACCGGCCGAGCTTTC AAACGGGCTCTGAGCGCCAC
Product: fibronectin type III domain-containing protein
Products: NA
Alternate protein names: Chitinase; Lysozyme [H]
Number of amino acids: Translated: 751; Mature: 750
Protein sequence:
>751_residues MATRTITWAWGAQEVVSFDPATDVLDFGWLNASDFTITEVNGSVVIALPANAHSYTLEGVSLSDLSLANISAFDASVFAQ WSAAIAADGATTPVAGTLFALSAARDTDTVLSFNPAADKLDFSGLSASDFSIAEVNGSVVIYLSAERQTYILDGVTLSQL SLSSIASQDAAVLAEWSQALASPAGSSAAPTSGGGEAVTTTLGWNWNTQTVLAFDPARDKIDFGWLTPQDFSVVELNGSV VILMPGAQQSYTLEGVTLAELSAANITARSAVVLEEWATLLSGASGSGGGSGGGSGSTLPVIEASAWIDAKAYVAGDLVS VGHLVYQANWWTLGTDPTSDHGAVGTGHVWSVVGYADLTPVAPDAPDGLHLLTTTETSATLTWDAAEVSGVGTVTGYAIY RDGELVGTTTDLSFKVSGLVADTTYHFSVVAVDEAGTSPAATPIAVTTDAPGTDAADQQHFSPYFEMWLPSSQNLVQTVE DVGLTAVTLAFVLGTGPDQIGWGGLGSIDNDTLANGTTISSMVAALQQNGVEVTISFGGGYGQEPALSFTNVAQLTAAYQ SVMDKYNVTSLDFDIEADALTNTAASHLRNEALVALEQANPDLTVSFTLPALPTGLNQAGLDLLAQAKADGVEIDTVNIM VMNYGAYYDSGDMGKDAIDAAEATIAQLHQLGLDAKVAITPMIGQNDVPGEVFTLDDARQLLDYAEGNDHIAYIAMWSLG RDHGDDVGHLTETSSGVAQHDYDFAKIFSMV
Sequences:
>Translated_751_residues MATRTITWAWGAQEVVSFDPATDVLDFGWLNASDFTITEVNGSVVIALPANAHSYTLEGVSLSDLSLANISAFDASVFAQ WSAAIAADGATTPVAGTLFALSAARDTDTVLSFNPAADKLDFSGLSASDFSIAEVNGSVVIYLSAERQTYILDGVTLSQL SLSSIASQDAAVLAEWSQALASPAGSSAAPTSGGGEAVTTTLGWNWNTQTVLAFDPARDKIDFGWLTPQDFSVVELNGSV VILMPGAQQSYTLEGVTLAELSAANITARSAVVLEEWATLLSGASGSGGGSGGGSGSTLPVIEASAWIDAKAYVAGDLVS VGHLVYQANWWTLGTDPTSDHGAVGTGHVWSVVGYADLTPVAPDAPDGLHLLTTTETSATLTWDAAEVSGVGTVTGYAIY RDGELVGTTTDLSFKVSGLVADTTYHFSVVAVDEAGTSPAATPIAVTTDAPGTDAADQQHFSPYFEMWLPSSQNLVQTVE DVGLTAVTLAFVLGTGPDQIGWGGLGSIDNDTLANGTTISSMVAALQQNGVEVTISFGGGYGQEPALSFTNVAQLTAAYQ SVMDKYNVTSLDFDIEADALTNTAASHLRNEALVALEQANPDLTVSFTLPALPTGLNQAGLDLLAQAKADGVEIDTVNIM VMNYGAYYDSGDMGKDAIDAAEATIAQLHQLGLDAKVAITPMIGQNDVPGEVFTLDDARQLLDYAEGNDHIAYIAMWSLG RDHGDDVGHLTETSSGVAQHDYDFAKIFSMV >Mature_750_residues ATRTITWAWGAQEVVSFDPATDVLDFGWLNASDFTITEVNGSVVIALPANAHSYTLEGVSLSDLSLANISAFDASVFAQW SAAIAADGATTPVAGTLFALSAARDTDTVLSFNPAADKLDFSGLSASDFSIAEVNGSVVIYLSAERQTYILDGVTLSQLS LSSIASQDAAVLAEWSQALASPAGSSAAPTSGGGEAVTTTLGWNWNTQTVLAFDPARDKIDFGWLTPQDFSVVELNGSVV ILMPGAQQSYTLEGVTLAELSAANITARSAVVLEEWATLLSGASGSGGGSGGGSGSTLPVIEASAWIDAKAYVAGDLVSV GHLVYQANWWTLGTDPTSDHGAVGTGHVWSVVGYADLTPVAPDAPDGLHLLTTTETSATLTWDAAEVSGVGTVTGYAIYR DGELVGTTTDLSFKVSGLVADTTYHFSVVAVDEAGTSPAATPIAVTTDAPGTDAADQQHFSPYFEMWLPSSQNLVQTVED VGLTAVTLAFVLGTGPDQIGWGGLGSIDNDTLANGTTISSMVAALQQNGVEVTISFGGGYGQEPALSFTNVAQLTAAYQS VMDKYNVTSLDFDIEADALTNTAASHLRNEALVALEQANPDLTVSFTLPALPTGLNQAGLDLLAQAKADGVEIDTVNIMV MNYGAYYDSGDMGKDAIDAAEATIAQLHQLGLDAKVAITPMIGQNDVPGEVFTLDDARQLLDYAEGNDHIAYIAMWSLGR DHGDDVGHLTETSSGVAQHDYDFAKIFSMV
Specific function: Bifunctional enzyme with lysozyme/chitinase activity [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 5 chitin-binding type-3 domains [H]
Homologues:
Organism=Escherichia coli, GI1789736, Length=487, Percent_Identity=27.7207392197125, Blast_Score=130, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003610 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF02839 CBM_5_12 [H]
EC number: =3.2.1.14; =3.2.1.17 [H]
Molecular weight: Translated: 77904; Mature: 77773
Theoretical pI: Translated: 3.70; Mature: 3.70
Prosite motif: PS50853 FN3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRTITWAWGAQEVVSFDPATDVLDFGWLNASDFTITEVNGSVVIALPANAHSYTLEGV CCCEEEEEECCCCHHEECCCCCCHHHCCCCCCCCEEEEEECCEEEEEECCCCCEEEECCC SLSDLSLANISAFDASVFAQWSAAIAADGATTPVAGTLFALSAARDTDTVLSFNPAADKL EECCCEEECCCHHCHHHHHHHHHHEECCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCC DFSGLSASDFSIAEVNGSVVIYLSAERQTYILDGVTLSQLSLSSIASQDAAVLAEWSQAL CCCCCCCCCEEEEEECCCEEEEEECCCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHH ASPAGSSAAPTSGGGEAVTTTLGWNWNTQTVLAFDPARDKIDFGWLTPQDFSVVELNGSV CCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCEEECCCCCCCCEEEEECCCE VILMPGAQQSYTLEGVTLAELSAANITARSAVVLEEWATLLSGASGSGGGSGGGSGSTLP EEEECCCCCCEEECCEEEEEECCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE VIEASAWIDAKAYVAGDLVSVGHLVYQANWWTLGTDPTSDHGAVGTGHVWSVVGYADLTP EEEECCEECEEHEEEHHHHHHCEEEEEECEEEECCCCCCCCCCCCCCCCEEEEECCCCCC VAPDAPDGLHLLTTTETSATLTWDAAEVSGVGTVTGYAIYRDGELVGTTTDLSFKVSGLV CCCCCCCCEEEEEECCCCEEEEECCHHCCCCCEEEEEEEEECCEEEEEECCCEEEEEEEE ADTTYHFSVVAVDEAGTSPAATPIAVTTDAPGTDAADQQHFSPYFEMWLPSSQNLVQTVE EECEEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCHHHCCCHHEEECCCCCHHHHHHH DVGLTAVTLAFVLGTGPDQIGWGGLGSIDNDTLANGTTISSMVAALQQNGVEVTISFGGG HCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCC YGQEPALSFTNVAQLTAAYQSVMDKYNVTSLDFDIEADALTNTAASHLRNEALVALEQAN CCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHCCCEEEEEECCC PDLTVSFTLPALPTGLNQAGLDLLAQAKADGVEIDTVNIMVMNYGAYYDSGDMGKDAIDA CCEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEEEEECCEECCCCCCCHHHHH AEATIAQLHQLGLDAKVAITPMIGQNDVPGEVFTLDDARQLLDYAEGNDHIAYIAMWSLG HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHHCCCCCCEEEEEEEECC RDHGDDVGHLTETSSGVAQHDYDFAKIFSMV CCCCCCCCCEECCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure ATRTITWAWGAQEVVSFDPATDVLDFGWLNASDFTITEVNGSVVIALPANAHSYTLEGV CCEEEEEECCCCHHEECCCCCCHHHCCCCCCCCEEEEEECCEEEEEECCCCCEEEECCC SLSDLSLANISAFDASVFAQWSAAIAADGATTPVAGTLFALSAARDTDTVLSFNPAADKL EECCCEEECCCHHCHHHHHHHHHHEECCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCC DFSGLSASDFSIAEVNGSVVIYLSAERQTYILDGVTLSQLSLSSIASQDAAVLAEWSQAL CCCCCCCCCEEEEEECCCEEEEEECCCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHH ASPAGSSAAPTSGGGEAVTTTLGWNWNTQTVLAFDPARDKIDFGWLTPQDFSVVELNGSV CCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCEEECCCCCCCCEEEEECCCE VILMPGAQQSYTLEGVTLAELSAANITARSAVVLEEWATLLSGASGSGGGSGGGSGSTLP EEEECCCCCCEEECCEEEEEECCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE VIEASAWIDAKAYVAGDLVSVGHLVYQANWWTLGTDPTSDHGAVGTGHVWSVVGYADLTP EEEECCEECEEHEEEHHHHHHCEEEEEECEEEECCCCCCCCCCCCCCCCEEEEECCCCCC VAPDAPDGLHLLTTTETSATLTWDAAEVSGVGTVTGYAIYRDGELVGTTTDLSFKVSGLV CCCCCCCCEEEEEECCCCEEEEECCHHCCCCCEEEEEEEEECCEEEEEECCCEEEEEEEE ADTTYHFSVVAVDEAGTSPAATPIAVTTDAPGTDAADQQHFSPYFEMWLPSSQNLVQTVE EECEEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCHHHCCCHHEEECCCCCHHHHHHH DVGLTAVTLAFVLGTGPDQIGWGGLGSIDNDTLANGTTISSMVAALQQNGVEVTISFGGG HCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCC YGQEPALSFTNVAQLTAAYQSVMDKYNVTSLDFDIEADALTNTAASHLRNEALVALEQAN CCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHCCCEEEEEECCC PDLTVSFTLPALPTGLNQAGLDLLAQAKADGVEIDTVNIMVMNYGAYYDSGDMGKDAIDA CCEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEEEEECCEECCCCCCCHHHHH AEATIAQLHQLGLDAKVAITPMIGQNDVPGEVFTLDDARQLLDYAEGNDHIAYIAMWSLG HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHHCCCCCCEEEEEEEECC RDHGDDVGHLTETSSGVAQHDYDFAKIFSMV CCCCCCCCCEECCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 2661540; 10419961; 10760150 [H]