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The map label for this gene is glxA [H]

Identifier: 154244822

GI number: 154244822

Start: 972763

End: 973911

Strand: Direct

Name: glxA [H]

Synonym: Xaut_0872

Alternate gene names: 154244822

Gene position: 972763-973911 (Clockwise)

Preceding gene: 154244815

Following gene: 154244823

Centisome position: 18.32

GC content: 71.71

Gene sequence:

>1149_bases
GTGATACTGCCTGCCGCAAGCGCCTTGATCTCGGCGTGGTGCGACCCCTGTCTGGAACAGATGCGACATTCGCCGCCCTC
CCGAACGCCGCCGGGCGCCCGGCACCCGAGCGCCAAGCTGCGGGTGGGCTTCGTGCTGATGCACAATTTCACCCTCACCG
CGTTTTCGAGCTTCGTGGACGTGCTGCGCCTCGCCGCCGACGAAGGCGACCGCTCGCGCCCCATCGGCTGTTCGTGGCAG
GTGATGAGCCCCGGCCGGCGCCCGGCGCGCTCGTCCTGCGGCATCGATATCCAGCCCACCGCCGACCTCGGCGATCCGGG
CGATTTCGACTACATCGTGGTGGTAGGCGGCCTGCTGCACGGCATGCCGCCGCTGCCGGCCGCGGTGGCCAGCTGGCTCC
AGCGCGCGGCCAAGGCAAACGTGCCGCTGGTGGGGGTCTGCACCGGCTCGTTCGTGCTGTGCCGGCTGGGGCTGATGGCG
CAGCGCAAGTGCTGCGTCAGCTGGTACCACTACCGCGATTTCCTGGAGGAATTTCCCACCCTCGTGCCGGTGGCCGACCA
GCTGTTCGTGGTGGACGGCGACCGCATCACCTGCTCCGGCGGGGCGGGGGTGGCGGACCTCGCGGCGCAACTGGTCACCC
AGCATCTGGGATCGGCGGTGGCGCAGAAGGCGCTGAACATCCTGCTCATCGACCGCCCGCGCACGGCCGACAGCGCCCAG
CCGGCGCCGGGCCTTGGGCAAGGCAGTCCGGGCGAGGGGCGGCCTGGGGATGGCGGCATCGAGGATGCCCGCGTCTCCCG
CGCGCTGCTGCTGATGGAGCAGAACCTTGCCGAGCCCCTGCCCATCGCCGCGCTGGCCGATGCGCTGGCGGTGAGCCCGC
GCCAGCTGGAGCGGCTGTTCGCCGAGCGGCTGGGCGAAAGCCCGCAGGAGAGCTATCTGGCGCTGCGCCTGCGCCATGCT
CGCTGGATGCTGGCCAACACCCCGTTTTCCGCCGCGCGCATCGCCGCCGATCTGGGCTTCGCCGACGGTTCCCATTTCGG
CCGGGCGTTCAAGGCCCGCTTCGGCGAGACCCCGGCAGTCTTCCGCCGCGCCACCGCCCGCCCCGCCCGCCGCTCCGCTC
CGGCGGAGGAGACGCGGGTGTTCGATTAG

Upstream 100 bases:

>100_bases
AAGCGGTGCTTTTCACGCGGCGCCGGAGTGGGTGGCGCGGACCGGCCACTCCCCACCCGCCCGCCCGGTCTTGACCTGCC
CCCCGGACGGGGCCGATGCT

Downstream 100 bases:

>100_bases
AGACCCCCGGCCACACCGGGAGCAATATGGGGAGACGACATGAGCACGACCGAGTTGAGCACGACCAAGGCGCCTTTCGT
GGTGATCGCGGAGTTCGATG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MILPAASALISAWCDPCLEQMRHSPPSRTPPGARHPSAKLRVGFVLMHNFTLTAFSSFVDVLRLAADEGDRSRPIGCSWQ
VMSPGRRPARSSCGIDIQPTADLGDPGDFDYIVVVGGLLHGMPPLPAAVASWLQRAAKANVPLVGVCTGSFVLCRLGLMA
QRKCCVSWYHYRDFLEEFPTLVPVADQLFVVDGDRITCSGGAGVADLAAQLVTQHLGSAVAQKALNILLIDRPRTADSAQ
PAPGLGQGSPGEGRPGDGGIEDARVSRALLLMEQNLAEPLPIAALADALAVSPRQLERLFAERLGESPQESYLALRLRHA
RWMLANTPFSAARIAADLGFADGSHFGRAFKARFGETPAVFRRATARPARRSAPAEETRVFD

Sequences:

>Translated_382_residues
MILPAASALISAWCDPCLEQMRHSPPSRTPPGARHPSAKLRVGFVLMHNFTLTAFSSFVDVLRLAADEGDRSRPIGCSWQ
VMSPGRRPARSSCGIDIQPTADLGDPGDFDYIVVVGGLLHGMPPLPAAVASWLQRAAKANVPLVGVCTGSFVLCRLGLMA
QRKCCVSWYHYRDFLEEFPTLVPVADQLFVVDGDRITCSGGAGVADLAAQLVTQHLGSAVAQKALNILLIDRPRTADSAQ
PAPGLGQGSPGEGRPGDGGIEDARVSRALLLMEQNLAEPLPIAALADALAVSPRQLERLFAERLGESPQESYLALRLRHA
RWMLANTPFSAARIAADLGFADGSHFGRAFKARFGETPAVFRRATARPARRSAPAEETRVFD
>Mature_382_residues
MILPAASALISAWCDPCLEQMRHSPPSRTPPGARHPSAKLRVGFVLMHNFTLTAFSSFVDVLRLAADEGDRSRPIGCSWQ
VMSPGRRPARSSCGIDIQPTADLGDPGDFDYIVVVGGLLHGMPPLPAAVASWLQRAAKANVPLVGVCTGSFVLCRLGLMA
QRKCCVSWYHYRDFLEEFPTLVPVADQLFVVDGDRITCSGGAGVADLAAQLVTQHLGSAVAQKALNILLIDRPRTADSAQ
PAPGLGQGSPGEGRPGDGGIEDARVSRALLLMEQNLAEPLPIAALADALAVSPRQLERLFAERLGESPQESYLALRLRHA
RWMLANTPFSAARIAADLGFADGSHFGRAFKARFGETPAVFRRATARPARRSAPAEETRVFD

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 40961; Mature: 40961

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILPAASALISAWCDPCLEQMRHSPPSRTPPGARHPSAKLRVGFVLMHNFTLTAFSSFVD
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHH
VLRLAADEGDRSRPIGCSWQVMSPGRRPARSSCGIDIQPTADLGDPGDFDYIVVVGGLLH
HHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
GMPPLPAAVASWLQRAAKANVPLVGVCTGSFVLCRLGLMAQRKCCVSWYHYRDFLEEFPT
CCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LVPVADQLFVVDGDRITCSGGAGVADLAAQLVTQHLGSAVAQKALNILLIDRPRTADSAQ
HHCCCCEEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCC
PAPGLGQGSPGEGRPGDGGIEDARVSRALLLMEQNLAEPLPIAALADALAVSPRQLERLF
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHH
AERLGESPQESYLALRLRHARWMLANTPFSAARIAADLGFADGSHFGRAFKARFGETPAV
HHHHCCCHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHH
FRRATARPARRSAPAEETRVFD
HHHHHCCCHHHCCCHHHHCCCC
>Mature Secondary Structure
MILPAASALISAWCDPCLEQMRHSPPSRTPPGARHPSAKLRVGFVLMHNFTLTAFSSFVD
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHH
VLRLAADEGDRSRPIGCSWQVMSPGRRPARSSCGIDIQPTADLGDPGDFDYIVVVGGLLH
HHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
GMPPLPAAVASWLQRAAKANVPLVGVCTGSFVLCRLGLMAQRKCCVSWYHYRDFLEEFPT
CCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LVPVADQLFVVDGDRITCSGGAGVADLAAQLVTQHLGSAVAQKALNILLIDRPRTADSAQ
HHCCCCEEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCC
PAPGLGQGSPGEGRPGDGGIEDARVSRALLLMEQNLAEPLPIAALADALAVSPRQLERLF
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHH
AERLGESPQESYLALRLRHARWMLANTPFSAARIAADLGFADGSHFGRAFKARFGETPAV
HHHHCCCHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHH
FRRATARPARRSAPAEETRVFD
HHHHHCCCHHHCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]