| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154244474
Identifier: 154244474
GI number: 154244474
Start: 582090
End: 582974
Strand: Direct
Name: 154244474
Synonym: Xaut_0517
Alternate gene names: NA
Gene position: 582090-582974 (Clockwise)
Preceding gene: 154244473
Following gene: 154244477
Centisome position: 10.96
GC content: 69.6
Gene sequence:
>885_bases ATGCTCTACGACATCCGCCAGACCACCACCTACAGCTATCAGGTGCCCGTGCGGGTGGTGCGGCAGGTGCTGCGCATGAC GCCGGTGGACCGCATCGGCCACCAGCATGTCATCGCCCACATCCTCGACATCGATCCCGATCCGGCGGAGCTGGAGCACG GCATCGACTTCTTCGGCAATGGCCTCACCTGGCTCACCATCGACCAGCCCCACGGCCATCTCTCGCTCACCACGCGTAGC CGGGTGGACGTGACCTCAACCGCTTTGCCGGACCCCGCCGAGACCCTGCTGGTGGACGATGTGCGCGCGGCGGCGCTGGA GGAGGCGGACCTCGGCCCGGATGCGGCGGCCCACGGCCTGTTCCCGAGCCGCGCCGTGCCGCTCGATTCCGAAATCACCG AGTGGACCGCCACCAGCTTCCGCGGCGACCGCCCGGTGCTGGAGGGCGGGCTGGAGCTGATGCATCGGGTGTATGAGGAT TTCACCTACCAGCCCGGCGCCACCCATGTGGCAACCCCGCCCCACGAGGCGTTTGCCGCCAAGGCCGGCGTATGCCAGGA CTTCGCCCAGGTGATGATCGCCGGCCTGCGCGGCCTCGGCCTGCCGGCGCGCTATGTGTCGGGCTATCTGCGGACCATCC CGCCGGAAGGCCAGCCGCGCCTCGAAGGGGCGGACGCCACCCACGCCTGGGTCGAGATCTGGTGCGGGCCGGAGGCGGGC TGGATCGGCCTTGACCCCACCAATGCCATTCCGGTGGGGGACGACCACATCATCCTCGCGGTTGGCCGCGACTATGCCGA CGTGGCCCCGGTGGACGGGGTGATCGTCACCTCGGGCGACCATCGCCTGTCCGTAGGCGTGGACGTGGCTCCTGTGGTGC GGTGA
Upstream 100 bases:
>100_bases CGTGAGGCAGAGCGAGCGCAAAGCGCTCTGGCCCGCGCTGAGATCGAGCGAAACGGGTCCGGGATGCACCCCATCCGAGG GATCCGCGAGGAAGGAAGAG
Downstream 100 bases:
>100_bases CGCCGGCACGCGTTGCCGCACGCCCGTTCGGCGCCTGAACGTTCCCGGTGCCGGTCAAAGGCCCGGCACCGTGACATGAG GGCGATCACGCCACGGCGCG
Product: transglutaminase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MLYDIRQTTTYSYQVPVRVVRQVLRMTPVDRIGHQHVIAHILDIDPDPAELEHGIDFFGNGLTWLTIDQPHGHLSLTTRS RVDVTSTALPDPAETLLVDDVRAAALEEADLGPDAAAHGLFPSRAVPLDSEITEWTATSFRGDRPVLEGGLELMHRVYED FTYQPGATHVATPPHEAFAAKAGVCQDFAQVMIAGLRGLGLPARYVSGYLRTIPPEGQPRLEGADATHAWVEIWCGPEAG WIGLDPTNAIPVGDDHIILAVGRDYADVAPVDGVIVTSGDHRLSVGVDVAPVVR
Sequences:
>Translated_294_residues MLYDIRQTTTYSYQVPVRVVRQVLRMTPVDRIGHQHVIAHILDIDPDPAELEHGIDFFGNGLTWLTIDQPHGHLSLTTRS RVDVTSTALPDPAETLLVDDVRAAALEEADLGPDAAAHGLFPSRAVPLDSEITEWTATSFRGDRPVLEGGLELMHRVYED FTYQPGATHVATPPHEAFAAKAGVCQDFAQVMIAGLRGLGLPARYVSGYLRTIPPEGQPRLEGADATHAWVEIWCGPEAG WIGLDPTNAIPVGDDHIILAVGRDYADVAPVDGVIVTSGDHRLSVGVDVAPVVR >Mature_294_residues MLYDIRQTTTYSYQVPVRVVRQVLRMTPVDRIGHQHVIAHILDIDPDPAELEHGIDFFGNGLTWLTIDQPHGHLSLTTRS RVDVTSTALPDPAETLLVDDVRAAALEEADLGPDAAAHGLFPSRAVPLDSEITEWTATSFRGDRPVLEGGLELMHRVYED FTYQPGATHVATPPHEAFAAKAGVCQDFAQVMIAGLRGLGLPARYVSGYLRTIPPEGQPRLEGADATHAWVEIWCGPEAG WIGLDPTNAIPVGDDHIILAVGRDYADVAPVDGVIVTSGDHRLSVGVDVAPVVR
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML0607 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013589 - InterPro: IPR002931 [H]
Pfam domain/function: PF08379 Bact_transglu_N; PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 31846; Mature: 31846
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYDIRQTTTYSYQVPVRVVRQVLRMTPVDRIGHQHVIAHILDIDPDPAELEHGIDFFGN CEEECCCCCEEEEECCHHHHHHHHHCCCHHHHCHHHHHHHEECCCCCHHHHHCCHHHHCC GLTWLTIDQPHGHLSLTTRSRVDVTSTALPDPAETLLVDDVRAAALEEADLGPDAAAHGL CEEEEEEECCCCEEEEEECCCCEEHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCC FPSRAVPLDSEITEWTATSFRGDRPVLEGGLELMHRVYEDFTYQPGATHVATPPHEAFAA CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH KAGVCQDFAQVMIAGLRGLGLPARYVSGYLRTIPPEGQPRLEGADATHAWVEIWCGPEAG HHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCC WIGLDPTNAIPVGDDHIILAVGRDYADVAPVDGVIVTSGDHRLSVGVDVAPVVR EEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCEEEECCCCCCCCC >Mature Secondary Structure MLYDIRQTTTYSYQVPVRVVRQVLRMTPVDRIGHQHVIAHILDIDPDPAELEHGIDFFGN CEEECCCCCEEEEECCHHHHHHHHHCCCHHHHCHHHHHHHEECCCCCHHHHHCCHHHHCC GLTWLTIDQPHGHLSLTTRSRVDVTSTALPDPAETLLVDDVRAAALEEADLGPDAAAHGL CEEEEEEECCCCEEEEEECCCCEEHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCC FPSRAVPLDSEITEWTATSFRGDRPVLEGGLELMHRVYEDFTYQPGATHVATPPHEAFAA CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH KAGVCQDFAQVMIAGLRGLGLPARYVSGYLRTIPPEGQPRLEGADATHAWVEIWCGPEAG HHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCC WIGLDPTNAIPVGDDHIILAVGRDYADVAPVDGVIVTSGDHRLSVGVDVAPVVR EEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]