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The map label for this gene is yfiO [C]

Identifier: 154244287

GI number: 154244287

Start: 342632

End: 343486

Strand: Direct

Name: yfiO [C]

Synonym: Xaut_0330

Alternate gene names: 154244287

Gene position: 342632-343486 (Clockwise)

Preceding gene: 154244286

Following gene: 154244288

Centisome position: 6.45

GC content: 62.22

Gene sequence:

>855_bases
ATGCGATTCTTTTACGAGGTCCTGAAGGTGCGCGCCGTCGTCCGCGGCGGAGCGCTGGCACTCGCCCTGGCGATGGGCCT
GCTTGTCACCGGCTGCGCCAGCGACAAGGACGATGTGCTGCCCCCCGACGAGCCGGCGGAGAAGATCTACAACGAGGGTC
TGACCCTGCTGCGCCGGCAGGAGCCGGAGAAGGCCGCCAAGCGCTTCGAGGATGTGGACAAAACCCATCCCTATTCGGAA
TGGGCGCGCAAATCGCTGCTCATGACCACCTATGCCTATTTCGAGGCCGGCAAATACGACGAGGCCATCGCAACCGGGAA
GCGCTACATCGCGCTTTATCCCGGATCGCAGGATGCGGCCTATGCGCATTATCTCGTCGCTTCCGCACTTTACGAGAACA
TTCCCGACATCACCCGCGACCAGCGGAAGACCCGCCAGGCGCTTGATGCGCTTGAAGATGTGGCGCGCAAGTATCCCAAC
ACCGAATACGCCGCCACGGCGAAGAAGAAGATCGAGGTTGCCCGCGACCAGCTCGCCGGCAAGGAGATGCTGATCGGCCG
CTACTATCTGGAGCAGCGCAACTACACGGGCGCCATCAACCGCTTCAAGGTCGTGGTGACACAATACCAGACGACGCGTC
AGGTGGAGGAAGCCCTGTATCGCCTCACCGAGGCCTACATGGCCCTCGGCGTGGTGAGCGAAGCGCAGACCGCCGCCGCC
GTACTCGGCTATAACTTCCCCGACAGTTCGTGGTACAAGGACGCCTACAAGCTGGTTCAGGCCGGAGGGGTCGAGCCGCA
GGAAAACAAGGCGTCCTGGATCAGCCAGGCGTTCAAGAAGATGGGGCTTGGCTGA

Upstream 100 bases:

>100_bases
GAGGACCAGGGCCGGGCGGTGCCATCGTGGCGCCATGTTCCGGCCGGCAATCCTCCTTTACAAGCAGCGCCCTGGGGCGC
GGGACGGAAGCTGAACCGTG

Downstream 100 bases:

>100_bases
TCATCCATGCTGGCAGCGCTCTCGATCCGGGACATCGTCCTCATCGAGAAGCTCGATCTCACCCTCTCGGAAGGCCTCAC
GGTCCTCACGGGTGAGACGG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MRFFYEVLKVRAVVRGGALALALAMGLLVTGCASDKDDVLPPDEPAEKIYNEGLTLLRRQEPEKAAKRFEDVDKTHPYSE
WARKSLLMTTYAYFEAGKYDEAIATGKRYIALYPGSQDAAYAHYLVASALYENIPDITRDQRKTRQALDALEDVARKYPN
TEYAATAKKKIEVARDQLAGKEMLIGRYYLEQRNYTGAINRFKVVVTQYQTTRQVEEALYRLTEAYMALGVVSEAQTAAA
VLGYNFPDSSWYKDAYKLVQAGGVEPQENKASWISQAFKKMGLG

Sequences:

>Translated_284_residues
MRFFYEVLKVRAVVRGGALALALAMGLLVTGCASDKDDVLPPDEPAEKIYNEGLTLLRRQEPEKAAKRFEDVDKTHPYSE
WARKSLLMTTYAYFEAGKYDEAIATGKRYIALYPGSQDAAYAHYLVASALYENIPDITRDQRKTRQALDALEDVARKYPN
TEYAATAKKKIEVARDQLAGKEMLIGRYYLEQRNYTGAINRFKVVVTQYQTTRQVEEALYRLTEAYMALGVVSEAQTAAA
VLGYNFPDSSWYKDAYKLVQAGGVEPQENKASWISQAFKKMGLG
>Mature_284_residues
MRFFYEVLKVRAVVRGGALALALAMGLLVTGCASDKDDVLPPDEPAEKIYNEGLTLLRRQEPEKAAKRFEDVDKTHPYSE
WARKSLLMTTYAYFEAGKYDEAIATGKRYIALYPGSQDAAYAHYLVASALYENIPDITRDQRKTRQALDALEDVARKYPN
TEYAATAKKKIEVARDQLAGKEMLIGRYYLEQRNYTGAINRFKVVVTQYQTTRQVEEALYRLTEAYMALGVVSEAQTAAA
VLGYNFPDSSWYKDAYKLVQAGGVEPQENKASWISQAFKKMGLG

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=243, Percent_Identity=25.5144032921811, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32013; Mature: 32013

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFFYEVLKVRAVVRGGALALALAMGLLVTGCASDKDDVLPPDEPAEKIYNEGLTLLRRQ
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
EPEKAAKRFEDVDKTHPYSEWARKSLLMTTYAYFEAGKYDEAIATGKRYIALYPGSQDAA
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCHH
YAHYLVASALYENIPDITRDQRKTRQALDALEDVARKYPNTEYAATAKKKIEVARDQLAG
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
KEMLIGRYYLEQRNYTGAINRFKVVVTQYQTTRQVEEALYRLTEAYMALGVVSEAQTAAA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGYNFPDSSWYKDAYKLVQAGGVEPQENKASWISQAFKKMGLG
HHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRFFYEVLKVRAVVRGGALALALAMGLLVTGCASDKDDVLPPDEPAEKIYNEGLTLLRRQ
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
EPEKAAKRFEDVDKTHPYSEWARKSLLMTTYAYFEAGKYDEAIATGKRYIALYPGSQDAA
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCHH
YAHYLVASALYENIPDITRDQRKTRQALDALEDVARKYPNTEYAATAKKKIEVARDQLAG
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
KEMLIGRYYLEQRNYTGAINRFKVVVTQYQTTRQVEEALYRLTEAYMALGVVSEAQTAAA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGYNFPDSSWYKDAYKLVQAGGVEPQENKASWISQAFKKMGLG
HHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]