| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is ppc [H]
Identifier: 154244275
GI number: 154244275
Start: 324011
End: 326791
Strand: Direct
Name: ppc [H]
Synonym: Xaut_0318
Alternate gene names: 154244275
Gene position: 324011-326791 (Clockwise)
Preceding gene: 154244273
Following gene: 154244279
Centisome position: 6.1
GC content: 67.31
Gene sequence:
>2781_bases ATGACGAGTGCGGTTTGGTCCATTGAGGCGCCGGGCGACGAGGAAGTGAAGGATCGGCCCCTGCGCGAGGATATTCGCCT GCTGGGGCGCATCCTTGGCGATACGGTGCGCGAGCAGGAGGGCGAGGAGGTGTTCGATCTGGTGGAGCGCATCCGCCAGA CCTCCATCCGCTTCCACCGCGACGACGACGAGACGGCCCGCGAGGAGCTGGGCGCGCTTTTGGAGCAGCTCTCCTCCCAG CGCGCCGTCGATATCATCCGCGCCTTCAGCTATTTCTCCCACCTCGCCAACATCGCCGAGGACGAGCACCACATCCGCCG CAACCGCGCCCATGCCATCGCCGGCTCGGCGCCGCGGGCCGGGAGCCTGGCCTATTCGCTCGCCCGCGCCGAGGCGCTGG GCATCGGGCCGCAGCAGCTCACGGAGTTCTTCTCCGGCGCGCACATGAGCCCGGTGCTCACCGCCCATCCCACAGAGGTG CGCCGCAAGAGCACCCTCAACCGGGAGATGGAAATCGCCGCCCTGCTGGACCGCCGCGAGCGCGTGGTGCCCACCCCGGC GGAGCAGGAGCAGGACGAGGAAACCCTGCGCCGCGCCGTGCTGACCCTGTGGCAGACCGCGCTGCTGCGCCGGATCAAGC TCACCGTGCTGGACGAGGTCGCCAACGGCCTGTCCTATTACGACTACACTTTCCTCAGCGAGCTGCCGCGCCTCTATTGC TCCATCGAGGACCATGTCTCGCAGGGCGGCTCTGAGGTAGCGCTACCTTCGTTCCTGCGCATCGGCAGCTGGATCGGCGG CGACCGCGACGGCAATCCCTTCGTCACCGCCGACGTGCTGAAGGAGACCGTGCGCGTCCACCGCGACCGCATCCTCGCCC ATTATGAGCAGGAGCTGACCGAGCTGGGCGCCGAACTGTCCCTCGGCGCGCGGCTCATCAAGGTTTCGCCGGAGCTGGCG GAACTGGCCGCCCGCTCCCCCGACCGCTCCCAGGAGCACCGCGAGGAGCCCTATCGCCTGGCGCTCGCCTATGTGCTCGG GCGGCTCAGGCTCACCGCCCGCCACCTGAAGGGCGAGGCGCCGGAGGGCACGGAAGCCGAGGACGCCGGCAGCCTCGCGC CTTACGTGAACGCGGCGGCGCTGAAGGCCGACCTCGACATCATCTACGCCTCGCTCTGCGACAATGGATCGAAGGTGCTG GCCCGCGGGCGGCTCCGGCTGCTGCGGCGGGCGGTGGACTGCTTCGGCTTCCACCTCGCCTGCATCGACCTGCGGCAAAA TTCCGACGTGCACGAGCGCGTGGTGGCGGACCTGTTCGAGAAGGTGGCCCCCGGCACCAATTACGTCGGCCTCGACGAGG AGGCGCGCATCGCCCTCCTGCTGCAGGAACTGGCCACCGCCCGGCCGCTGGCCTCGCCCTTCCTAGCCTACGAGGACGAG ACCCAGTCGGAACTCGCCATCCTGCGCATGGCCGCCGAGGCGCACCGGGCGCTGGGGCGCGAGGTCATCCCCAACTGCAT CATCTCCAAGGCGGAAGGCGTCTCCGACCTCCTGGAAGTGGCGCTGCTCTTGAAGGAGGTGGGCCTCGTCACCGCCGAGG GCACCACGGCGCTGAACATCATCCCCCTGTTCGAGACCATCGGCGACCTTCAGGTCTGCGCCAAGGTGATGGACCGGGTG CTCTCCCTCCCGGCCTATCGCAAGCTGGTGTCGAGCCGGGGCGACGAGCAGGAAGTGATGCTCGGCTATTCCGACAGCAA CAAGGATGGCGGCTTCGTCACCTCCGGCTGGGAATTGTACAAGGCGGAGATCGGCCTCATCGAGGTGTTCCGCGCCCATA ACGTGCGCCTGCGCCTGTTCCACGGCCGTGGCGGCTCGGTGGGCCGCGGCGGCGGGCCGAGCTATGACGCCATCCTCGCC CAGCCGGGCGGGGCGGTGAACGGGCAGATCCGTATCACCGAGCAGGGCGAGATCATCGCCTCCAAATATTCCAACCCGGA CATGGGCCGGCGCAACCTGGAGATCCTGGTCTCGGCGACCCTGGAAGCCTCCCTGCTCCAGCCCCAGTTCAATGCCCCGC GCACCGAATTCCTCACCGCCATGGAGGAAATCTCGGATACAGCCTTCAGCGCCTACCGCAATCTTGTCTACGAAACCGAG GGCTTCGAGGACTATTTCTGGTCCTCCACCGTCATCAGCGAGATCGCCACATTGAACATCGGCTCGCGCCCGGCCTCGCG GGCGAAGACGCGCTCCATCGAGAAGCTGCGGGCCATTCCGTGGGTGTTCTCCTGGGCCCAGTGCCGGCTGATGCTGCCGG CCTGGTACGGCTTCGGCTCGGCGGTGGAAGCCTTTGCCGAGCGGCGGCCGGACTATGGCCTGTCTTTCCTGCAGGCCATG TATCGCGAATGGCCGTTCTTCCGCACCCAGCTCTCCAACATGGACATGGTGCTGTCGAAGTCCTCGCTCGCCATCGCCTC GCGCTATGCGGAGCTGGTGCCGGACGTGGAGCTGCGCACCCAGATCTTCGGCCGCATCCGCGCCGAATACGAGCGCACCA TCAAGTACGTCCTCGCCATCATGGGCCAGCAGAAGCTCTTGGAGGACAACCCGCTGCTCGACCGCTCCATCCGCAACCGC TTCCCCTATCTCGATCCGCTGAACCACCTGCAGATCGAGCTTTTGCGCCAGCACCGCGCCAATTCCGGCGACGACAAGGT GCTGCACGGCATCCAGCTGTCCATCAACGGCATCTCGGCGGGCCTGCGCAACTCGGGGTGA
Upstream 100 bases:
>100_bases ACAGTGTTGTGCCGTCGCGTTGCTCTTTCGCTCCTGCACAAATTCCGTAAGACTAACGTCGAAAAGCGGCTGCGATCCGC TCCGGGGGAAGGGTTGCCAG
Downstream 100 bases:
>100_bases GGGGAGGGGGGCTGTCCGCGCCGGGGTACATGCCCTTCGGATTGCTTGGCCGACTTGCCAGTTTCACCACCGTCATGGCC GGGCTTGTCCCGGCCATCCA
Product: phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase [H]
Number of amino acids: Translated: 926; Mature: 925
Protein sequence:
>926_residues MTSAVWSIEAPGDEEVKDRPLREDIRLLGRILGDTVREQEGEEVFDLVERIRQTSIRFHRDDDETAREELGALLEQLSSQ RAVDIIRAFSYFSHLANIAEDEHHIRRNRAHAIAGSAPRAGSLAYSLARAEALGIGPQQLTEFFSGAHMSPVLTAHPTEV RRKSTLNREMEIAALLDRRERVVPTPAEQEQDEETLRRAVLTLWQTALLRRIKLTVLDEVANGLSYYDYTFLSELPRLYC SIEDHVSQGGSEVALPSFLRIGSWIGGDRDGNPFVTADVLKETVRVHRDRILAHYEQELTELGAELSLGARLIKVSPELA ELAARSPDRSQEHREEPYRLALAYVLGRLRLTARHLKGEAPEGTEAEDAGSLAPYVNAAALKADLDIIYASLCDNGSKVL ARGRLRLLRRAVDCFGFHLACIDLRQNSDVHERVVADLFEKVAPGTNYVGLDEEARIALLLQELATARPLASPFLAYEDE TQSELAILRMAAEAHRALGREVIPNCIISKAEGVSDLLEVALLLKEVGLVTAEGTTALNIIPLFETIGDLQVCAKVMDRV LSLPAYRKLVSSRGDEQEVMLGYSDSNKDGGFVTSGWELYKAEIGLIEVFRAHNVRLRLFHGRGGSVGRGGGPSYDAILA QPGGAVNGQIRITEQGEIIASKYSNPDMGRRNLEILVSATLEASLLQPQFNAPRTEFLTAMEEISDTAFSAYRNLVYETE GFEDYFWSSTVISEIATLNIGSRPASRAKTRSIEKLRAIPWVFSWAQCRLMLPAWYGFGSAVEAFAERRPDYGLSFLQAM YREWPFFRTQLSNMDMVLSKSSLAIASRYAELVPDVELRTQIFGRIRAEYERTIKYVLAIMGQQKLLEDNPLLDRSIRNR FPYLDPLNHLQIELLRQHRANSGDDKVLHGIQLSINGISAGLRNSG
Sequences:
>Translated_926_residues MTSAVWSIEAPGDEEVKDRPLREDIRLLGRILGDTVREQEGEEVFDLVERIRQTSIRFHRDDDETAREELGALLEQLSSQ RAVDIIRAFSYFSHLANIAEDEHHIRRNRAHAIAGSAPRAGSLAYSLARAEALGIGPQQLTEFFSGAHMSPVLTAHPTEV RRKSTLNREMEIAALLDRRERVVPTPAEQEQDEETLRRAVLTLWQTALLRRIKLTVLDEVANGLSYYDYTFLSELPRLYC SIEDHVSQGGSEVALPSFLRIGSWIGGDRDGNPFVTADVLKETVRVHRDRILAHYEQELTELGAELSLGARLIKVSPELA ELAARSPDRSQEHREEPYRLALAYVLGRLRLTARHLKGEAPEGTEAEDAGSLAPYVNAAALKADLDIIYASLCDNGSKVL ARGRLRLLRRAVDCFGFHLACIDLRQNSDVHERVVADLFEKVAPGTNYVGLDEEARIALLLQELATARPLASPFLAYEDE TQSELAILRMAAEAHRALGREVIPNCIISKAEGVSDLLEVALLLKEVGLVTAEGTTALNIIPLFETIGDLQVCAKVMDRV LSLPAYRKLVSSRGDEQEVMLGYSDSNKDGGFVTSGWELYKAEIGLIEVFRAHNVRLRLFHGRGGSVGRGGGPSYDAILA QPGGAVNGQIRITEQGEIIASKYSNPDMGRRNLEILVSATLEASLLQPQFNAPRTEFLTAMEEISDTAFSAYRNLVYETE GFEDYFWSSTVISEIATLNIGSRPASRAKTRSIEKLRAIPWVFSWAQCRLMLPAWYGFGSAVEAFAERRPDYGLSFLQAM YREWPFFRTQLSNMDMVLSKSSLAIASRYAELVPDVELRTQIFGRIRAEYERTIKYVLAIMGQQKLLEDNPLLDRSIRNR FPYLDPLNHLQIELLRQHRANSGDDKVLHGIQLSINGISAGLRNSG >Mature_925_residues TSAVWSIEAPGDEEVKDRPLREDIRLLGRILGDTVREQEGEEVFDLVERIRQTSIRFHRDDDETAREELGALLEQLSSQR AVDIIRAFSYFSHLANIAEDEHHIRRNRAHAIAGSAPRAGSLAYSLARAEALGIGPQQLTEFFSGAHMSPVLTAHPTEVR RKSTLNREMEIAALLDRRERVVPTPAEQEQDEETLRRAVLTLWQTALLRRIKLTVLDEVANGLSYYDYTFLSELPRLYCS IEDHVSQGGSEVALPSFLRIGSWIGGDRDGNPFVTADVLKETVRVHRDRILAHYEQELTELGAELSLGARLIKVSPELAE LAARSPDRSQEHREEPYRLALAYVLGRLRLTARHLKGEAPEGTEAEDAGSLAPYVNAAALKADLDIIYASLCDNGSKVLA RGRLRLLRRAVDCFGFHLACIDLRQNSDVHERVVADLFEKVAPGTNYVGLDEEARIALLLQELATARPLASPFLAYEDET QSELAILRMAAEAHRALGREVIPNCIISKAEGVSDLLEVALLLKEVGLVTAEGTTALNIIPLFETIGDLQVCAKVMDRVL SLPAYRKLVSSRGDEQEVMLGYSDSNKDGGFVTSGWELYKAEIGLIEVFRAHNVRLRLFHGRGGSVGRGGGPSYDAILAQ PGGAVNGQIRITEQGEIIASKYSNPDMGRRNLEILVSATLEASLLQPQFNAPRTEFLTAMEEISDTAFSAYRNLVYETEG FEDYFWSSTVISEIATLNIGSRPASRAKTRSIEKLRAIPWVFSWAQCRLMLPAWYGFGSAVEAFAERRPDYGLSFLQAMY REWPFFRTQLSNMDMVLSKSSLAIASRYAELVPDVELRTQIFGRIRAEYERTIKYVLAIMGQQKLLEDNPLLDRSIRNRF PYLDPLNHLQIELLRQHRANSGDDKVLHGIQLSINGISAGLRNSG
Specific function: Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle [H]
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790393, Length=921, Percent_Identity=34.6362649294245, Blast_Score=445, Evalue=1e-126,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 [H]
Pfam domain/function: PF00311 PEPcase [H]
EC number: =4.1.1.31 [H]
Molecular weight: Translated: 103405; Mature: 103274
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS00781 PEPCASE_1 ; PS00393 PEPCASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAVWSIEAPGDEEVKDRPLREDIRLLGRILGDTVREQEGEEVFDLVERIRQTSIRFHR CCCCEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEC DDDETAREELGALLEQLSSQRAVDIIRAFSYFSHLANIAEDEHHIRRNRAHAIAGSAPRA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GSLAYSLARAEALGIGPQQLTEFFSGAHMSPVLTAHPTEVRRKSTLNREMEIAALLDRRE CHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHH RVVPTPAEQEQDEETLRRAVLTLWQTALLRRIKLTVLDEVANGLSYYDYTFLSELPRLYC CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH SIEDHVSQGGSEVALPSFLRIGSWIGGDRDGNPFVTADVLKETVRVHRDRILAHYEQELT HHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH ELGAELSLGARLIKVSPELAELAARSPDRSQEHREEPYRLALAYVLGRLRLTARHLKGEA HHCCHHHHCCEEEECCHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC PEGTEAEDAGSLAPYVNAAALKADLDIIYASLCDNGSKVLARGRLRLLRRAVDCFGFHLA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHE CIDLRQNSDVHERVVADLFEKVAPGTNYVGLDEEARIALLLQELATARPLASPFLAYEDE EEEECCCCCHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCHHCCCCC TQSELAILRMAAEAHRALGREVIPNCIISKAEGVSDLLEVALLLKEVGLVTAEGTTALNI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEECCCCEEEE IPLFETIGDLQVCAKVMDRVLSLPAYRKLVSSRGDEQEVMLGYSDSNKDGGFVTSGWELY EHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCCCCCCEEECCHHHH KAEIGLIEVFRAHNVRLRLFHGRGGSVGRGGGPSYDAILAQPGGAVNGQIRITEQGEIIA HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCEEE SKYSNPDMGRRNLEILVSATLEASLLQPQFNAPRTEFLTAMEEISDTAFSAYRNLVYETE ECCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC GFEDYFWSSTVISEIATLNIGSRPASRAKTRSIEKLRAIPWVFSWAQCRLMLPAWYGFGS CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH AVEAFAERRPDYGLSFLQAMYREWPFFRTQLSNMDMVLSKSSLAIASRYAELVPDVELRT HHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHH QIFGRIRAEYERTIKYVLAIMGQQKLLEDNPLLDRSIRNRFPYLDPLNHLQIELLRQHRA HHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCC NSGDDKVLHGIQLSINGISAGLRNSG CCCCCHHEEEEEEEECHHHCCCCCCC >Mature Secondary Structure TSAVWSIEAPGDEEVKDRPLREDIRLLGRILGDTVREQEGEEVFDLVERIRQTSIRFHR CCCEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEC DDDETAREELGALLEQLSSQRAVDIIRAFSYFSHLANIAEDEHHIRRNRAHAIAGSAPRA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GSLAYSLARAEALGIGPQQLTEFFSGAHMSPVLTAHPTEVRRKSTLNREMEIAALLDRRE CHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHH RVVPTPAEQEQDEETLRRAVLTLWQTALLRRIKLTVLDEVANGLSYYDYTFLSELPRLYC CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH SIEDHVSQGGSEVALPSFLRIGSWIGGDRDGNPFVTADVLKETVRVHRDRILAHYEQELT HHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH ELGAELSLGARLIKVSPELAELAARSPDRSQEHREEPYRLALAYVLGRLRLTARHLKGEA HHCCHHHHCCEEEECCHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC PEGTEAEDAGSLAPYVNAAALKADLDIIYASLCDNGSKVLARGRLRLLRRAVDCFGFHLA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHE CIDLRQNSDVHERVVADLFEKVAPGTNYVGLDEEARIALLLQELATARPLASPFLAYEDE EEEECCCCCHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCHHCCCCC TQSELAILRMAAEAHRALGREVIPNCIISKAEGVSDLLEVALLLKEVGLVTAEGTTALNI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEECCCCEEEE IPLFETIGDLQVCAKVMDRVLSLPAYRKLVSSRGDEQEVMLGYSDSNKDGGFVTSGWELY EHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCCCCCCEEECCHHHH KAEIGLIEVFRAHNVRLRLFHGRGGSVGRGGGPSYDAILAQPGGAVNGQIRITEQGEIIA HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCEEE SKYSNPDMGRRNLEILVSATLEASLLQPQFNAPRTEFLTAMEEISDTAFSAYRNLVYETE ECCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC GFEDYFWSSTVISEIATLNIGSRPASRAKTRSIEKLRAIPWVFSWAQCRLMLPAWYGFGS CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH AVEAFAERRPDYGLSFLQAMYREWPFFRTQLSNMDMVLSKSSLAIASRYAELVPDVELRT HHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHH QIFGRIRAEYERTIKYVLAIMGQQKLLEDNPLLDRSIRNRFPYLDPLNHLQIELLRQHRA HHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCC NSGDDKVLHGIQLSINGISAGLRNSG CCCCCHHEEEEEEEECHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA