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The map label for this gene is fdxD [H]

Identifier: 154244244

GI number: 154244244

Start: 290785

End: 291150

Strand: Reverse

Name: fdxD [H]

Synonym: Xaut_0287

Alternate gene names: 154244244

Gene position: 291150-290785 (Counterclockwise)

Preceding gene: 154244245

Following gene: 154244243

Centisome position: 5.48

GC content: 60.66

Gene sequence:

>366_bases
ATGCCCATTATCACTTTCCGCTCGACCACCACCAAGGACAAGCGCGCCTACGCTACGGCCGGCGATACGGGCACCATCCT
CACCGTCGCCCGCGCGAACGGGGTGAAGATTCCCTTCGAATGCCAGGAAGGCGAGTGCGGCTCCTGCCTCATCCGTGTGG
AATATGTCGAGGGCAAGCCGCGCATGGCGATTGCGCTGACGGAGCGGGAAAAGACCAAGCTCAAGGAGCTAGGCAAGATT
ACCGAAGAGCAGATCACGGATGCGGAAGTCAACGATGTAGCGCCGCCCTATCGTCTGGCCTGCCAGTTCATCGCCCGTGA
GGAAGAAGTCATCATCCATTACGAGCACTGCCCCGCCGAGGCGTGA

Upstream 100 bases:

>100_bases
AAGTTCGCCTGACGCATCCGCAAAATATATCAGTTTGATGTCATCCCATAATATTGCGTGTGCGAAGTTTTTTTAAATTC
TAGATCACCGGAATACCATC

Downstream 100 bases:

>100_bases
AAAACGGGCTACGCCGGGCGTCTCAATCGCCGGCATGCCTGACACCACGTTTGATTGCTTTGGATTTCTGGAGGGTGCCA
CTTTGGACAGCGTCGGTGAA

Product: ferredoxin

Products: NA

Alternate protein names: Ferredoxin V; FdV; Ferredoxin, plant-type [H]

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MPIITFRSTTTKDKRAYATAGDTGTILTVARANGVKIPFECQEGECGSCLIRVEYVEGKPRMAIALTEREKTKLKELGKI
TEEQITDAEVNDVAPPYRLACQFIAREEEVIIHYEHCPAEA

Sequences:

>Translated_121_residues
MPIITFRSTTTKDKRAYATAGDTGTILTVARANGVKIPFECQEGECGSCLIRVEYVEGKPRMAIALTEREKTKLKELGKI
TEEQITDAEVNDVAPPYRLACQFIAREEEVIIHYEHCPAEA
>Mature_120_residues
PIITFRSTTTKDKRAYATAGDTGTILTVARANGVKIPFECQEGECGSCLIRVEYVEGKPRMAIALTEREKTKLKELGKIT
EEQITDAEVNDVAPPYRLACQFIAREEEVIIHYEHCPAEA

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. This ferredoxin probably participates in nitrogen fixation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 13490; Mature: 13358

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIITFRSTTTKDKRAYATAGDTGTILTVARANGVKIPFECQEGECGSCLIRVEYVEGKP
CCEEEECCCCCCCCEEEEECCCCCEEEEEEECCCEEEEEECCCCCCCEEEEEEEEECCCC
RMAIALTEREKTKLKELGKITEEQITDAEVNDVAPPYRLACQFIAREEEVIIHYEHCPAE
CEEEEEECCHHHHHHHHHCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCC
A
C
>Mature Secondary Structure 
PIITFRSTTTKDKRAYATAGDTGTILTVARANGVKIPFECQEGECGSCLIRVEYVEGKP
CEEEECCCCCCCCEEEEECCCCCEEEEEEECCCEEEEEECCCCCCCEEEEEEEEECCCC
RMAIALTEREKTKLKELGKITEEQITDAEVNDVAPPYRLACQFIAREEEVIIHYEHCPAE
CEEEEEECCHHHHHHHHHCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7693551 [H]