| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154244140
Identifier: 154244140
GI number: 154244140
Start: 180435
End: 181454
Strand: Reverse
Name: 154244140
Synonym: Xaut_0182
Alternate gene names: NA
Gene position: 181454-180435 (Counterclockwise)
Preceding gene: 154244141
Following gene: 154244130
Centisome position: 3.42
GC content: 68.53
Gene sequence:
>1020_bases ATGAGCGGGTCCCAATTCAGCGCATACGGCTTCGACGTTGGCGACCTCGACGCCCATCTGAAGGCGCACATCGGCGGGCT CGAAGGTGCGCCGCAGCTCCAGCCCATTTCCGGGGGCCAGTCCAACCCCACCTTCTTCGTCACCTATGCCAACCGCGCGC TGGTGCTGCGCAAGCAGCCGCCCGGCGAGTTGCTTCCCTCCGCCCATGCGGTGGATCGTGAATTCCGCATCATGCGCGCG CTGGCAGACACGCCGGTGCCGGTGCCCCCCGCGCTGCTGCTGTGCGAGGACAAGTCCATCATCGGCACCTTGTTCTATGT GATGGACAAGGTGGAGGGGCGCGTGTTCCACGACTGCACCCTGCCCGGCGTCTCGCCCGCCGAGCGCGGCGCCATGTATG CCGCCATGGCGCAGACGCTTGCCGCGCTCCACAACGTGGACTTCGCCGCCGCCGGCCTCGCCGATTTCGGCCGGCCGGGC AATTATTTCGGCCGCCAGATCACCCGCTGGACCCGCCAGTGGGAGCTGTCCAAAACCCGCGAGGACACCAACATCGACCG CCTGGTGGCCTGGCTGCCGGCCCATGTTCCGGCGGACGACACCACGCGCATCGCCCATGGCGACTACCGCATGGGCAATC TCATGTTCCACCCCACCCGCCCCGAGGTGGTGGCGGTGCTGGACTGGGAATTGTCCACCCTCGGCCATCCGCTGGCGGAC CTTGCCCATTGCGCCATGGCGTGGGTGTCGCGACCGGAGGAGTACGGTGGCATCGCCGGGCTGGATCTCGACGCCCTCGG CATTCCCTCCCGCGCGGATTTCGTGGCGCAATATGAGGCGGCGGCGACCCATGGCCTCACGCTCACAAACTTCCACATGG CGTTCGCCCTGTTCCGCTGGGCAGTGATCTTCGAGGGCATCGCGGCGCGGGCGAAGGCCGGCAACGCGGCAGCGGAAGGC GCGGCGGAAACCGGCGCCCTCGCCGCCGCCTTCGCCCGGCGGGCGGCTGAATTCACCTGA
Upstream 100 bases:
>100_bases GTCTGGTGGACGGCGCGGACGCGGTGCACGAGATGGTGCTGAACCGCTTCCTGGAGAAGGAAGAAGGTGCCTTCTGGAAC TGGCCGGTGGGAGAAGGCGC
Downstream 100 bases:
>100_bases CGGGACACGCAGCAGCGAGGGGCGCAGTCCCGATCGTCCCTCAGCCCGAAAGCCCGCCGAACCAGGCGCCGAAATAGCCG GCGTAGATCTCCGGCGCCTC
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Phosphotransferase Family; Acyl-CoA Dehydrogenase; Acyl-Co A Dehydrogenase; Acyl-CoA Dehydrogenase Domain-Containing Protein; Acyl-CoA Dehydrogenase FadE; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; Acyl-CoA Dehydrogenase Family Member
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MSGSQFSAYGFDVGDLDAHLKAHIGGLEGAPQLQPISGGQSNPTFFVTYANRALVLRKQPPGELLPSAHAVDREFRIMRA LADTPVPVPPALLLCEDKSIIGTLFYVMDKVEGRVFHDCTLPGVSPAERGAMYAAMAQTLAALHNVDFAAAGLADFGRPG NYFGRQITRWTRQWELSKTREDTNIDRLVAWLPAHVPADDTTRIAHGDYRMGNLMFHPTRPEVVAVLDWELSTLGHPLAD LAHCAMAWVSRPEEYGGIAGLDLDALGIPSRADFVAQYEAAATHGLTLTNFHMAFALFRWAVIFEGIAARAKAGNAAAEG AAETGALAAAFARRAAEFT
Sequences:
>Translated_339_residues MSGSQFSAYGFDVGDLDAHLKAHIGGLEGAPQLQPISGGQSNPTFFVTYANRALVLRKQPPGELLPSAHAVDREFRIMRA LADTPVPVPPALLLCEDKSIIGTLFYVMDKVEGRVFHDCTLPGVSPAERGAMYAAMAQTLAALHNVDFAAAGLADFGRPG NYFGRQITRWTRQWELSKTREDTNIDRLVAWLPAHVPADDTTRIAHGDYRMGNLMFHPTRPEVVAVLDWELSTLGHPLAD LAHCAMAWVSRPEEYGGIAGLDLDALGIPSRADFVAQYEAAATHGLTLTNFHMAFALFRWAVIFEGIAARAKAGNAAAEG AAETGALAAAFARRAAEFT >Mature_338_residues SGSQFSAYGFDVGDLDAHLKAHIGGLEGAPQLQPISGGQSNPTFFVTYANRALVLRKQPPGELLPSAHAVDREFRIMRAL ADTPVPVPPALLLCEDKSIIGTLFYVMDKVEGRVFHDCTLPGVSPAERGAMYAAMAQTLAALHNVDFAAAGLADFGRPGN YFGRQITRWTRQWELSKTREDTNIDRLVAWLPAHVPADDTTRIAHGDYRMGNLMFHPTRPEVVAVLDWELSTLGHPLADL AHCAMAWVSRPEEYGGIAGLDLDALGIPSRADFVAQYEAAATHGLTLTNFHMAFALFRWAVIFEGIAARAKAGNAAAEGA AETGALAAAFARRAAEFT
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI211971008, Length=331, Percent_Identity=46.2235649546828, Blast_Score=296, Evalue=2e-80, Organism=Homo sapiens, GI48976061, Length=331, Percent_Identity=46.2235649546828, Blast_Score=296, Evalue=2e-80, Organism=Homo sapiens, GI38505218, Length=321, Percent_Identity=39.2523364485981, Blast_Score=248, Evalue=8e-66, Organism=Caenorhabditis elegans, GI17562446, Length=304, Percent_Identity=38.8157894736842, Blast_Score=219, Evalue=1e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36584; Mature: 36453
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSQFSAYGFDVGDLDAHLKAHIGGLEGAPQLQPISGGQSNPTFFVTYANRALVLRKQP CCCCCCEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEECC PGELLPSAHAVDREFRIMRALADTPVPVPPALLLCEDKSIIGTLFYVMDKVEGRVFHDCT CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEECC LPGVSPAERGAMYAAMAQTLAALHNVDFAAAGLADFGRPGNYFGRQITRWTRQWELSKTR CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHCCCCCCHHHHHHHHHHHHHHHHHCC EDTNIDRLVAWLPAHVPADDTTRIAHGDYRMGNLMFHPTRPEVVAVLDWELSTLGHPLAD CCCCHHHHHHHHCCCCCCCCCCEEECCCEEECCEEECCCCCCEEEEEECCHHHHCCCHHH LAHCAMAWVSRPEEYGGIAGLDLDALGIPSRADFVAQYEAAATHGLTLTNFHMAFALFRW HHHHHHHHHCCCHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHHH AVIFEGIAARAKAGNAAAEGAAETGALAAAFARRAAEFT HHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SGSQFSAYGFDVGDLDAHLKAHIGGLEGAPQLQPISGGQSNPTFFVTYANRALVLRKQP CCCCCEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEECC PGELLPSAHAVDREFRIMRALADTPVPVPPALLLCEDKSIIGTLFYVMDKVEGRVFHDCT CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEECC LPGVSPAERGAMYAAMAQTLAALHNVDFAAAGLADFGRPGNYFGRQITRWTRQWELSKTR CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHCCCCCCHHHHHHHHHHHHHHHHHCC EDTNIDRLVAWLPAHVPADDTTRIAHGDYRMGNLMFHPTRPEVVAVLDWELSTLGHPLAD CCCCHHHHHHHHCCCCCCCCCCEEECCCEEECCEEECCCCCCEEEEEECCHHHHCCCHHH LAHCAMAWVSRPEEYGGIAGLDLDALGIPSRADFVAQYEAAATHGLTLTNFHMAFALFRW HHHHHHHHHCCCHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHHH AVIFEGIAARAKAGNAAAEGAAETGALAAAFARRAAEFT HHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA