Click here to switch to the map view.

The map label for this gene is sufC [C]

Identifier: 154244043

GI number: 154244043

Start: 92375

End: 93136

Strand: Direct

Name: sufC [C]

Synonym: Xaut_0085

Alternate gene names: 154244043

Gene position: 92375-93136 (Clockwise)

Preceding gene: 154244042

Following gene: 154244044

Centisome position: 1.74

GC content: 65.22

Gene sequence:

>762_bases
ATGGCTCCCCTTCTGGAAATCAAGGACCTCCATGCCGAGATCTCGGGGGGGCGCAAGATCATCGACGGCATGAACCTCAC
CATCAATCCCGGTGAGGTGCATGCCATCATGGGGCCGAACGGCGCCGGCAAGTCCACCCTGTCCTATGTGCTCTCGGGCA
AGCCGGGCTATGACATCACCGCCGGCGAGGTGATCTTCCGCGGTGTGAACCTGCTGGAACTGTCGCCCGACGAGCGCGCG
GCCCAGGGCCTGTTCCTGTGCTTCCAGTATCCGCTGGAAATCCCCGGCGTCTCCAACATGGCGTTCCTGCACACGGCGGT
GAACAGCCAGCGCCGCAAGCGCGGCGAGACCGAGCTGACCTCGCCGGAGCTGGTGCGCAAGGTACGCGAGCTGGGCCAGA
CGCTCGGCATCAACGCCGAGATGCTGAAGCGCCCGGTGAACGTGGGTTTCTCCGGCGGCGAGAAGAAGCGCAACGAGACG
CTGCAGATGGCGTTGCTGGAGCCCTATCTGTGTGTGCTCGACGAGGCGGATTCGGGCCTCGACATCGACGCGCTGAAGGT
GGTGTCCAACGGCGTGAACGCGCTGCGCTCGCCCGAGCGCTCCATGCTGGTGATCACCCACTACCAGCGCCTGCTCGATT
ATATCGTGCCGGACGTGGTCCACGTCTTCGCCGCCGGTCGCATCGTGCACACGGGCGGCAAGGAACTGGCGCTGGAGCTG
GAAGCCACCGGCTACGCCCAGTACCAGAACGAGGCGGCGTGA

Upstream 100 bases:

>100_bases
CGCAGAAGCTTATTTCCATCAGCCTCGAAGGCAGCGTCGGCTGACGCCAAGTCTTCGATCGTCCAAATCGCCCGGCCCCA
CACATCAAAGGATCTTCACC

Downstream 100 bases:

>100_bases
TCCCATGGCCGCCGCGACCTCTGCCCAGATCCGACCCATGAAGACCAGTGCCGAGCTGGCGCTGGCCGAGACCTTCGCTG
CCGCGCGCACCGCCCTTCCC

Product: FeS assembly ATPase SufC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MAPLLEIKDLHAEISGGRKIIDGMNLTINPGEVHAIMGPNGAGKSTLSYVLSGKPGYDITAGEVIFRGVNLLELSPDERA
AQGLFLCFQYPLEIPGVSNMAFLHTAVNSQRRKRGETELTSPELVRKVRELGQTLGINAEMLKRPVNVGFSGGEKKRNET
LQMALLEPYLCVLDEADSGLDIDALKVVSNGVNALRSPERSMLVITHYQRLLDYIVPDVVHVFAAGRIVHTGGKELALEL
EATGYAQYQNEAA

Sequences:

>Translated_253_residues
MAPLLEIKDLHAEISGGRKIIDGMNLTINPGEVHAIMGPNGAGKSTLSYVLSGKPGYDITAGEVIFRGVNLLELSPDERA
AQGLFLCFQYPLEIPGVSNMAFLHTAVNSQRRKRGETELTSPELVRKVRELGQTLGINAEMLKRPVNVGFSGGEKKRNET
LQMALLEPYLCVLDEADSGLDIDALKVVSNGVNALRSPERSMLVITHYQRLLDYIVPDVVHVFAAGRIVHTGGKELALEL
EATGYAQYQNEAA
>Mature_252_residues
APLLEIKDLHAEISGGRKIIDGMNLTINPGEVHAIMGPNGAGKSTLSYVLSGKPGYDITAGEVIFRGVNLLELSPDERAA
QGLFLCFQYPLEIPGVSNMAFLHTAVNSQRRKRGETELTSPELVRKVRELGQTLGINAEMLKRPVNVGFSGGEKKRNETL
QMALLEPYLCVLDEADSGLDIDALKVVSNGVNALRSPERSMLVITHYQRLLDYIVPDVVHVFAAGRIVHTGGKELALELE
ATGYAQYQNEAA

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI156105685, Length=221, Percent_Identity=28.0542986425339, Blast_Score=68, Evalue=9e-12,
Organism=Escherichia coli, GI1787972, Length=243, Percent_Identity=55.9670781893004, Blast_Score=281, Evalue=3e-77,
Organism=Escherichia coli, GI1787500, Length=247, Percent_Identity=28.3400809716599, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI87081791, Length=183, Percent_Identity=27.8688524590164, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1786319, Length=214, Percent_Identity=28.0373831775701, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1787792, Length=96, Percent_Identity=36.4583333333333, Blast_Score=61, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=226, Percent_Identity=28.7610619469027, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27524; Mature: 27393

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPLLEIKDLHAEISGGRKIIDGMNLTINPGEVHAIMGPNGAGKSTLSYVLSGKPGYDIT
CCCCHHHHHHHHHHCCCEEEECCCCEEECCCEEEEEECCCCCCCHHHHHEECCCCCCCCC
AGEVIFRGVNLLELSPDERAAQGLFLCFQYPLEIPGVSNMAFLHTAVNSQRRKRGETELT
HHHHHHCCCCEEEECCCHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
SPELVRKVRELGQTLGINAEMLKRPVNVGFSGGEKKRNETLQMALLEPYLCVLDEADSGL
CHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCC
DIDALKVVSNGVNALRSPERSMLVITHYQRLLDYIVPDVVHVFAAGRIVHTGGKELALEL
CHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEE
EATGYAQYQNEAA
ECCCCHHHCCCCC
>Mature Secondary Structure 
APLLEIKDLHAEISGGRKIIDGMNLTINPGEVHAIMGPNGAGKSTLSYVLSGKPGYDIT
CCCHHHHHHHHHHCCCEEEECCCCEEECCCEEEEEECCCCCCCHHHHHEECCCCCCCCC
AGEVIFRGVNLLELSPDERAAQGLFLCFQYPLEIPGVSNMAFLHTAVNSQRRKRGETELT
HHHHHHCCCCEEEECCCHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
SPELVRKVRELGQTLGINAEMLKRPVNVGFSGGEKKRNETLQMALLEPYLCVLDEADSGL
CHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCC
DIDALKVVSNGVNALRSPERSMLVITHYQRLLDYIVPDVVHVFAAGRIVHTGGKELALEL
CHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEE
EATGYAQYQNEAA
ECCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]