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The map label for this gene is sufB [C]

Identifier: 154244042

GI number: 154244042

Start: 90834

End: 92318

Strand: Direct

Name: sufB [C]

Synonym: Xaut_0084

Alternate gene names: 154244042

Gene position: 90834-92318 (Clockwise)

Preceding gene: 154244041

Following gene: 154244043

Centisome position: 1.71

GC content: 61.89

Gene sequence:

>1485_bases
ATGGCGGCCGTACAGGACACAGTCGAACAGGTTCGCTCCATCGACGTCGACCAGTACAAATACGGGTTCGAGACACTGAT
CGAATCCGAGAAGGCGCCGAAAGGCCTTTCGGAGGAGGTGATTCGCTACATCTCCGCCAAGAAGGAAGAGCCGGAATGGA
TGCTGCAGTGGCGCCTTGATGCCTATGCGCGCTGGCTGACCATGCCGGAGCCGGAGTGGGCGCGGGTCGACTATCCGACC
ATCGATTACCAGGATCTCTATTATTATTCCCAGCCCAAGCAGTTCAAGGCGCCCAAGTCGCTGGACGAGGTGGATCCGGA
GATCCTGAAGACTTACGCCAAGCTCGGCATCCCGCTGCGCGAGCAGGAGATCCTGGCCGGCGTCGAGATCCCCGAGGGCG
AGCGGCCGAAGATCGCCGTGGACGCGGTGTTCGACAGCGTCTCGGTCGCCACCACCTTCAAAGAAGAGCTGAAGGCCGCC
GGCGTCATCTTCATGCCGATCTCCGAGGCGCTGCGCGAGCACCCCGATATGGTGAAGCAGTATCTCGGCTCCGTGGTGCC
GCCCACCGACAATTATTTTGCGACGCTGAACCAGGCGGTGTTTTCCGACGGCTCGTTCGTCTACATCCCGCCCGGCGTGC
GTTGCCCCATGGAGCTGTCCACCTACTTCCGCATCAACGAGAAGAACACCGGCCAGTTCGAGCGCACCCTGATCATCGCC
GACAAGGGCTCCTACGTGTCGTACCTGGAGGGCTGCACCGCCCCCATGCGCGACGAGAACCAGCTCCATGCCGCGGTGGT
GGAACTGGTGGTGCTCGACGATGCCGAGATCAAGTATTCGACGGTGCAGAACTGGTATCCCGGCGATGCCGACGGCAAGG
GTGGCATCTATAATTTTGTGACCAAGCGCGGCGACTGCCGGGGCAAGAATTCCAAGATTTCCTGGACCCAGGTGGAGACC
GGCTCGGCCATCACCTGGAAGTATCCGAGCTGCGTGCTGCGCGGGGAAGGTTCCTCCGGCGAGTTCTACTCCATCGCCAT
CTCCAATGGCCGCCAGCAGGTGGACAGTGGCACCAAGATGATCCATCTGGGCAAGAACACCACCAGCCGGATCATCTCCA
AGGGCATCTCGGCGGGCCGCTCCAACAACACCTATCGCGGCCTCGTCTCGGCCCATCGCAAGGCCGCAGGCGCGCGCAAT
TTCACCAACTGCGATTCGCTGCTCATCGGCGACAATTGCGGGGCGCACACCGTGCCCTACATCGAGGCGAAGAACCCCAC
CGCCCAGTTTGAGCACGAGGCCACCACCTCGAAGATCTCCGAGGACATGCTGTTCTACTGCATGCAGCGCGGCCTGACCC
AGGAAGACGCGGTCGCCCTCGTGGTCAACGGCTTCGTGCGCGACGTGCTCCAGCAGCTGCCCATGGAGTTCGCCGTGGAA
GCGCAGAAGCTTATTTCCATCAGCCTCGAAGGCAGCGTCGGCTGA

Upstream 100 bases:

>100_bases
CAGGCGAAGTCTTTTCAAGGCCCCTGGCGGGCTTCATGTGCGGTGTGCTGCGCCCGGTAACGTGAGCGCGCCGCCGCTGG
CAAGTTGGACGGAGGGACAT

Downstream 100 bases:

>100_bases
CGCCAAGTCTTCGATCGTCCAAATCGCCCGGCCCCACACATCAAAGGATCTTCACCATGGCTCCCCTTCTGGAAATCAAG
GACCTCCATGCCGAGATCTC

Product: FeS assembly protein SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 494; Mature: 493

Protein sequence:

>494_residues
MAAVQDTVEQVRSIDVDQYKYGFETLIESEKAPKGLSEEVIRYISAKKEEPEWMLQWRLDAYARWLTMPEPEWARVDYPT
IDYQDLYYYSQPKQFKAPKSLDEVDPEILKTYAKLGIPLREQEILAGVEIPEGERPKIAVDAVFDSVSVATTFKEELKAA
GVIFMPISEALREHPDMVKQYLGSVVPPTDNYFATLNQAVFSDGSFVYIPPGVRCPMELSTYFRINEKNTGQFERTLIIA
DKGSYVSYLEGCTAPMRDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDADGKGGIYNFVTKRGDCRGKNSKISWTQVET
GSAITWKYPSCVLRGEGSSGEFYSIAISNGRQQVDSGTKMIHLGKNTTSRIISKGISAGRSNNTYRGLVSAHRKAAGARN
FTNCDSLLIGDNCGAHTVPYIEAKNPTAQFEHEATTSKISEDMLFYCMQRGLTQEDAVALVVNGFVRDVLQQLPMEFAVE
AQKLISISLEGSVG

Sequences:

>Translated_494_residues
MAAVQDTVEQVRSIDVDQYKYGFETLIESEKAPKGLSEEVIRYISAKKEEPEWMLQWRLDAYARWLTMPEPEWARVDYPT
IDYQDLYYYSQPKQFKAPKSLDEVDPEILKTYAKLGIPLREQEILAGVEIPEGERPKIAVDAVFDSVSVATTFKEELKAA
GVIFMPISEALREHPDMVKQYLGSVVPPTDNYFATLNQAVFSDGSFVYIPPGVRCPMELSTYFRINEKNTGQFERTLIIA
DKGSYVSYLEGCTAPMRDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDADGKGGIYNFVTKRGDCRGKNSKISWTQVET
GSAITWKYPSCVLRGEGSSGEFYSIAISNGRQQVDSGTKMIHLGKNTTSRIISKGISAGRSNNTYRGLVSAHRKAAGARN
FTNCDSLLIGDNCGAHTVPYIEAKNPTAQFEHEATTSKISEDMLFYCMQRGLTQEDAVALVVNGFVRDVLQQLPMEFAVE
AQKLISISLEGSVG
>Mature_493_residues
AAVQDTVEQVRSIDVDQYKYGFETLIESEKAPKGLSEEVIRYISAKKEEPEWMLQWRLDAYARWLTMPEPEWARVDYPTI
DYQDLYYYSQPKQFKAPKSLDEVDPEILKTYAKLGIPLREQEILAGVEIPEGERPKIAVDAVFDSVSVATTFKEELKAAG
VIFMPISEALREHPDMVKQYLGSVVPPTDNYFATLNQAVFSDGSFVYIPPGVRCPMELSTYFRINEKNTGQFERTLIIAD
KGSYVSYLEGCTAPMRDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDADGKGGIYNFVTKRGDCRGKNSKISWTQVETG
SAITWKYPSCVLRGEGSSGEFYSIAISNGRQQVDSGTKMIHLGKNTTSRIISKGISAGRSNNTYRGLVSAHRKAAGARNF
TNCDSLLIGDNCGAHTVPYIEAKNPTAQFEHEATTSKISEDMLFYCMQRGLTQEDAVALVVNGFVRDVLQQLPMEFAVEA
QKLISISLEGSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=477, Percent_Identity=59.3291404612159, Blast_Score=620, Evalue=1e-179,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 55143; Mature: 55012

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAVQDTVEQVRSIDVDQYKYGFETLIESEKAPKGLSEEVIRYISAKKEEPEWMLQWRLD
CCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
AYARWLTMPEPEWARVDYPTIDYQDLYYYSQPKQFKAPKSLDEVDPEILKTYAKLGIPLR
HHHHHHCCCCCCCCCCCCCCCCHHHCEEECCCCCCCCCCCHHHCCHHHHHHHHHHCCCCC
EQEILAGVEIPEGERPKIAVDAVFDSVSVATTFKEELKAAGVIFMPISEALREHPDMVKQ
HHHHHCCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHCCEEEEEHHHHHHCCHHHHHH
YLGSVVPPTDNYFATLNQAVFSDGSFVYIPPGVRCPMELSTYFRINEKNTGQFERTLIIA
HHCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEEECCCCCCCEEEEEEEE
DKGSYVSYLEGCTAPMRDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDADGKGGIYNFV
CCCCHHHHHHCCCCCCCCCHHHHHHHHEEEEECCCCEEEHHHCCCCCCCCCCCCCHHHHH
TKRGDCRGKNSKISWTQVETGSAITWKYPSCVLRGEGSSGEFYSIAISNGRQQVDSGTKM
HCCCCCCCCCCCEEEEEEECCCEEEEECCCEEEECCCCCCCEEEEEECCCCHHHCCCCEE
IHLGKNTTSRIISKGISAGRSNNTYRGLVSAHRKAAGARNFTNCDSLLIGDNCGAHTVPY
EEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCE
IEAKNPTAQFEHEATTSKISEDMLFYCMQRGLTQEDAVALVVNGFVRDVLQQLPMEFAVE
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH
AQKLISISLEGSVG
HHHEEEEEECCCCC
>Mature Secondary Structure 
AAVQDTVEQVRSIDVDQYKYGFETLIESEKAPKGLSEEVIRYISAKKEEPEWMLQWRLD
CCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
AYARWLTMPEPEWARVDYPTIDYQDLYYYSQPKQFKAPKSLDEVDPEILKTYAKLGIPLR
HHHHHHCCCCCCCCCCCCCCCCHHHCEEECCCCCCCCCCCHHHCCHHHHHHHHHHCCCCC
EQEILAGVEIPEGERPKIAVDAVFDSVSVATTFKEELKAAGVIFMPISEALREHPDMVKQ
HHHHHCCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHCCEEEEEHHHHHHCCHHHHHH
YLGSVVPPTDNYFATLNQAVFSDGSFVYIPPGVRCPMELSTYFRINEKNTGQFERTLIIA
HHCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEEECCCCCCCEEEEEEEE
DKGSYVSYLEGCTAPMRDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDADGKGGIYNFV
CCCCHHHHHHCCCCCCCCCHHHHHHHHEEEEECCCCEEEHHHCCCCCCCCCCCCCHHHHH
TKRGDCRGKNSKISWTQVETGSAITWKYPSCVLRGEGSSGEFYSIAISNGRQQVDSGTKM
HCCCCCCCCCCCEEEEEEECCCEEEEECCCEEEECCCCCCCEEEEEECCCCHHHCCCCEE
IHLGKNTTSRIISKGISAGRSNNTYRGLVSAHRKAAGARNFTNCDSLLIGDNCGAHTVPY
EEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCE
IEAKNPTAQFEHEATTSKISEDMLFYCMQRGLTQEDAVALVVNGFVRDVLQQLPMEFAVE
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH
AQKLISISLEGSVG
HHHEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]