| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is dut
Identifier: 154244035
GI number: 154244035
Start: 81800
End: 82276
Strand: Reverse
Name: dut
Synonym: Xaut_0077
Alternate gene names: 154244035
Gene position: 82276-81800 (Counterclockwise)
Preceding gene: 154244036
Following gene: 154244034
Centisome position: 1.55
GC content: 66.88
Gene sequence:
>477_bases ATGAGCCGCCCTTCGGTCCGCATCCAGCGCCTGCCCCATGGCGAAGGCCTGCCCCTGCCCGCCTATGCCACCGAGGGCGC GGCCGGCCTCGACCTCTCCAGCGCCCTGCCGGAGGAGACCCCCCTCATCCTCCTGCCCGGGGCGTTCGCCGCCGTTCCCA CCGGCTTCGCCATCGCCTTGCCGGAGGGCTTCGAGGCCCAGGTGCGTCCCCGCTCGGGCCTTGCCCGCAAGCACGGGGTG AGCGTGCTCAATACGCCCGGCACCATCGACTGGGATTATCGCGGCGAGCTGATGGTCCTGCTCATCAATCACGGGCCCGA GCCGTTCACCGTGACGCGGGGCATGCGCATCGCCCAGATGGTGGTTGCCCCGGTCACCCAAATAATGCTGGAAGAATCCG GAGATCTGAGTGAAACTGCACGCGGCTCCGGTGGTTTTGGTTCAACCGGCTTCGGAGCTACGTTTTTGAAGAAGTAG
Upstream 100 bases:
>100_bases TGACCGCTGCCGGGGTGGAGGACTGGCCCTCCGCCTCCAAGGCCGAAGTCGCCCGCCATCTGGTGGCGCGCATGGCCGCC GAACTTGCGGGAGAAGCCCG
Downstream 100 bases:
>100_bases CTACAGCCTGATGCCGCGTTTATCCGACAAAAGCCTCCTCGCCATTGCAGCCGTCGTGGATGTGGCCGTGCACGCGCGCG GCGCTCCGGTGGCTGCCAAG
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase [H]
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MSRPSVRIQRLPHGEGLPLPAYATEGAAGLDLSSALPEETPLILLPGAFAAVPTGFAIALPEGFEAQVRPRSGLARKHGV SVLNTPGTIDWDYRGELMVLLINHGPEPFTVTRGMRIAQMVVAPVTQIMLEESGDLSETARGSGGFGSTGFGATFLKK
Sequences:
>Translated_158_residues MSRPSVRIQRLPHGEGLPLPAYATEGAAGLDLSSALPEETPLILLPGAFAAVPTGFAIALPEGFEAQVRPRSGLARKHGV SVLNTPGTIDWDYRGELMVLLINHGPEPFTVTRGMRIAQMVVAPVTQIMLEESGDLSETARGSGGFGSTGFGATFLKK >Mature_157_residues SRPSVRIQRLPHGEGLPLPAYATEGAAGLDLSSALPEETPLILLPGAFAAVPTGFAIALPEGFEAQVRPRSGLARKHGVS VLNTPGTIDWDYRGELMVLLINHGPEPFTVTRGMRIAQMVVAPVTQIMLEESGDLSETARGSGGFGSTGFGATFLKK
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family [H]
Homologues:
Organism=Homo sapiens, GI70906444, Length=146, Percent_Identity=44.5205479452055, Blast_Score=100, Evalue=8e-22, Organism=Homo sapiens, GI4503423, Length=146, Percent_Identity=44.5205479452055, Blast_Score=99, Evalue=2e-21, Organism=Homo sapiens, GI70906441, Length=145, Percent_Identity=44.8275862068966, Blast_Score=96, Evalue=1e-20, Organism=Escherichia coli, GI1790071, Length=151, Percent_Identity=43.7086092715232, Blast_Score=116, Evalue=8e-28, Organism=Caenorhabditis elegans, GI71988561, Length=151, Percent_Identity=42.3841059602649, Blast_Score=105, Evalue=8e-24, Organism=Saccharomyces cerevisiae, GI6319729, Length=152, Percent_Identity=34.8684210526316, Blast_Score=82, Evalue=4e-17, Organism=Drosophila melanogaster, GI24583610, Length=132, Percent_Identity=40.1515151515151, Blast_Score=83, Evalue=9e-17, Organism=Drosophila melanogaster, GI19921126, Length=132, Percent_Identity=40.1515151515151, Blast_Score=82, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008180 - InterPro: IPR008181 [H]
Pfam domain/function: PF00692 dUTPase [H]
EC number: =3.6.1.23 [H]
Molecular weight: Translated: 16637; Mature: 16506
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPSVRIQRLPHGEGLPLPAYATEGAAGLDLSSALPEETPLILLPGAFAAVPTGFAIAL CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEECCCHHHCCCCEEEEC PEGFEAQVRPRSGLARKHGVSVLNTPGTIDWDYRGELMVLLINHGPEPFTVTRGMRIAQM CCCCCEEECCCCCCHHHHCCEEECCCCEEEECCCCCEEEEEECCCCCCEEEECCCHHHHH VVAPVTQIMLEESGDLSETARGSGGFGSTGFGATFLKK HHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCHHHCC >Mature Secondary Structure SRPSVRIQRLPHGEGLPLPAYATEGAAGLDLSSALPEETPLILLPGAFAAVPTGFAIAL CCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEECCCHHHCCCCEEEEC PEGFEAQVRPRSGLARKHGVSVLNTPGTIDWDYRGELMVLLINHGPEPFTVTRGMRIAQM CCCCCEEECCCCCCHHHHCCEEECCCCEEEECCCCCEEEEEECCCCCCEEEECCCHHHHH VVAPVTQIMLEESGDLSETARGSGGFGSTGFGATFLKK HHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA