| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is yfhP [C]
Identifier: 154244034
GI number: 154244034
Start: 81349
End: 81789
Strand: Reverse
Name: yfhP [C]
Synonym: Xaut_0076
Alternate gene names: 154244034
Gene position: 81789-81349 (Counterclockwise)
Preceding gene: 154244035
Following gene: 154244033
Centisome position: 1.54
GC content: 70.52
Gene sequence:
>441_bases ATGCCGCGTTTATCCGACAAAAGCCTCCTCGCCATTGCAGCCGTCGTGGATGTGGCCGTGCACGCGCGCGGCGCTCCGGT GGCTGCCAAGGCACTCGCAGCCCGGCACGGCCTTCCGCCCCGCCGGCTTGAGCCCGTGCTCCAGGCGCTGGTCCATGCCG GCGTGCTGAAGGGGGTGCGCGGTCCCCGCGGCGGCTACGAGCTGGCGCGCGAGCGCCGGCGCGTCTCCGTCGCCGAGATC GTCCGGGTCGTCGAGGGGGCCGAGGAGGAGAAGGAAATCATCCTGCCCCCGCTGGTGACCGAGGTGGTCCAGCCTGCCGT TGCGGCGGCCGAGGATACGTTCGACACTGCGCTCGACGCGGTGACGCTCGAGGACCTCTGCCGCAGCGCCGATGGCAAGG GCCACGGTTCGGAGCACGAGAGGATCGATTTCGCCATTTGA
Upstream 100 bases:
>100_bases CTGGAAGAATCCGGAGATCTGAGTGAAACTGCACGCGGCTCCGGTGGTTTTGGTTCAACCGGCTTCGGAGCTACGTTTTT GAAGAAGTAGCTACAGCCTG
Downstream 100 bases:
>100_bases GAGGTACGCCCCCCGCGTGCCGGCGACCAATTTCCCAAGGAGATCGCCCATGGCAGGACCTGCCGCCAAGATCGTGCCCG CCGCCCAGCCTCGTCCGGGG
Product: BadM/Rrf2 family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator BadM/Rrf2 Family; Transcriptional Regulator; Rrf2 Family Protein
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MPRLSDKSLLAIAAVVDVAVHARGAPVAAKALAARHGLPPRRLEPVLQALVHAGVLKGVRGPRGGYELARERRRVSVAEI VRVVEGAEEEKEIILPPLVTEVVQPAVAAAEDTFDTALDAVTLEDLCRSADGKGHGSEHERIDFAI
Sequences:
>Translated_146_residues MPRLSDKSLLAIAAVVDVAVHARGAPVAAKALAARHGLPPRRLEPVLQALVHAGVLKGVRGPRGGYELARERRRVSVAEI VRVVEGAEEEKEIILPPLVTEVVQPAVAAAEDTFDTALDAVTLEDLCRSADGKGHGSEHERIDFAI >Mature_145_residues PRLSDKSLLAIAAVVDVAVHARGAPVAAKALAARHGLPPRRLEPVLQALVHAGVLKGVRGPRGGYELARERRRVSVAEIV RVVEGAEEEKEIILPPLVTEVVQPAVAAAEDTFDTALDAVTLEDLCRSADGKGHGSEHERIDFAI
Specific function: Unknown
COG id: COG1959
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15515; Mature: 15384
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLSDKSLLAIAAVVDVAVHARGAPVAAKALAARHGLPPRRLEPVLQALVHAGVLKGVR CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC GPRGGYELARERRRVSVAEIVRVVEGAEEEKEIILPPLVTEVVQPAVAAAEDTFDTALDA CCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHH VTLEDLCRSADGKGHGSEHERIDFAI HHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure PRLSDKSLLAIAAVVDVAVHARGAPVAAKALAARHGLPPRRLEPVLQALVHAGVLKGVR CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC GPRGGYELARERRRVSVAEIVRVVEGAEEEKEIILPPLVTEVVQPAVAAAEDTFDTALDA CCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHH VTLEDLCRSADGKGHGSEHERIDFAI HHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA