Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is yfhP [C]

Identifier: 154244034

GI number: 154244034

Start: 81349

End: 81789

Strand: Reverse

Name: yfhP [C]

Synonym: Xaut_0076

Alternate gene names: 154244034

Gene position: 81789-81349 (Counterclockwise)

Preceding gene: 154244035

Following gene: 154244033

Centisome position: 1.54

GC content: 70.52

Gene sequence:

>441_bases
ATGCCGCGTTTATCCGACAAAAGCCTCCTCGCCATTGCAGCCGTCGTGGATGTGGCCGTGCACGCGCGCGGCGCTCCGGT
GGCTGCCAAGGCACTCGCAGCCCGGCACGGCCTTCCGCCCCGCCGGCTTGAGCCCGTGCTCCAGGCGCTGGTCCATGCCG
GCGTGCTGAAGGGGGTGCGCGGTCCCCGCGGCGGCTACGAGCTGGCGCGCGAGCGCCGGCGCGTCTCCGTCGCCGAGATC
GTCCGGGTCGTCGAGGGGGCCGAGGAGGAGAAGGAAATCATCCTGCCCCCGCTGGTGACCGAGGTGGTCCAGCCTGCCGT
TGCGGCGGCCGAGGATACGTTCGACACTGCGCTCGACGCGGTGACGCTCGAGGACCTCTGCCGCAGCGCCGATGGCAAGG
GCCACGGTTCGGAGCACGAGAGGATCGATTTCGCCATTTGA

Upstream 100 bases:

>100_bases
CTGGAAGAATCCGGAGATCTGAGTGAAACTGCACGCGGCTCCGGTGGTTTTGGTTCAACCGGCTTCGGAGCTACGTTTTT
GAAGAAGTAGCTACAGCCTG

Downstream 100 bases:

>100_bases
GAGGTACGCCCCCCGCGTGCCGGCGACCAATTTCCCAAGGAGATCGCCCATGGCAGGACCTGCCGCCAAGATCGTGCCCG
CCGCCCAGCCTCGTCCGGGG

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator BadM/Rrf2 Family; Transcriptional Regulator; Rrf2 Family Protein

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MPRLSDKSLLAIAAVVDVAVHARGAPVAAKALAARHGLPPRRLEPVLQALVHAGVLKGVRGPRGGYELARERRRVSVAEI
VRVVEGAEEEKEIILPPLVTEVVQPAVAAAEDTFDTALDAVTLEDLCRSADGKGHGSEHERIDFAI

Sequences:

>Translated_146_residues
MPRLSDKSLLAIAAVVDVAVHARGAPVAAKALAARHGLPPRRLEPVLQALVHAGVLKGVRGPRGGYELARERRRVSVAEI
VRVVEGAEEEKEIILPPLVTEVVQPAVAAAEDTFDTALDAVTLEDLCRSADGKGHGSEHERIDFAI
>Mature_145_residues
PRLSDKSLLAIAAVVDVAVHARGAPVAAKALAARHGLPPRRLEPVLQALVHAGVLKGVRGPRGGYELARERRRVSVAEIV
RVVEGAEEEKEIILPPLVTEVVQPAVAAAEDTFDTALDAVTLEDLCRSADGKGHGSEHERIDFAI

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15515; Mature: 15384

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLSDKSLLAIAAVVDVAVHARGAPVAAKALAARHGLPPRRLEPVLQALVHAGVLKGVR
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
GPRGGYELARERRRVSVAEIVRVVEGAEEEKEIILPPLVTEVVQPAVAAAEDTFDTALDA
CCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHH
VTLEDLCRSADGKGHGSEHERIDFAI
HHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PRLSDKSLLAIAAVVDVAVHARGAPVAAKALAARHGLPPRRLEPVLQALVHAGVLKGVR
CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
GPRGGYELARERRRVSVAEIVRVVEGAEEEKEIILPPLVTEVVQPAVAAAEDTFDTALDA
CCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHH
VTLEDLCRSADGKGHGSEHERIDFAI
HHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA