| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is braF [H]
Identifier: 154244002
GI number: 154244002
Start: 46999
End: 47760
Strand: Reverse
Name: braF [H]
Synonym: Xaut_0044
Alternate gene names: 154244002
Gene position: 47760-46999 (Counterclockwise)
Preceding gene: 154244003
Following gene: 154244001
Centisome position: 0.9
GC content: 68.37
Gene sequence:
>762_bases ATGAGCACGGCGCTGGAAATCTCCGCCCTGTCCAAGTCGTTCGCGGGCGTACAGGCCATCCGCGACTTGTCCTTCACCGT GCCGAAGGGCGTCTCCACGGCGCTCATCGGCCCCAACGGGGCCGGCAAGACCACGGTGTTCAACATGGTCAGCGGCGTCT ATGGCGTGGATGCCGGCCGCATCACGGTGAACGGCGTGGACGTGACCGGCATGCCCTCCCGCCGCCGCATCGGCACCGGC GTCGCCCGCTCGTTCCAGAACGTCCGGCTGATGCCGCATCTGTCGGTGCTGGAAAACCTGCTGGTGGGCCAGCATGTGCG TGCCTCCTCACTGGCCGCGCTGCTCACCCCCTACCGTCTCATCCCCAACCACCGCTGGAAGCGCGAGGCCCGCGCCGCGC TGGAGGAAAGCGGCCTCGGCCGCTGGGCGGACGAGACCGTCTCCGCCCTGCCCTACGGCGTGCGCAAGCGCATCGACCTG GTGCGTGCCACGCTCGCCGGCGCCAGCCTGCTGATGCTGGACGAGCCCGCCGCCGGCCTCAATCCCTCCGAGACCAACGC CTTGAGGGATCACCTCAAGGCACTGATGGCCAAGGGCACCACCCTGCTGGTGGTGGAGCACGACATGCACTTCGTGGAGT CCATCTGCCAGAACGTGGTGGTGCTGAATTTCGGCGAGAAGATCGCCGAGGGTCCCCTCTCCCGCGTGCGGCAGGATCCC AGGGTGCGCGAGGCCTATATCGGCTCGGACGGGGAGGCCTGA
Upstream 100 bases:
>100_bases TCGCAGTCTTCATCATCGTCTTCATGGCGCTGCGCCCTCAGGGGCTGGTGACGGCCGCCCTGTTCCGCCTGTTCCGTCGC CGCGCGCCGGAGGCCTCCTC
Downstream 100 bases:
>100_bases CATGGCGCTGCTCGAAGTCTCCGCCCTTTCCGTCTCCTATGGCCGCGTGGCCGCGCTCACCGATGTCTCGCTCAGCGTCC GCGAGGGAGAGATCGTCACC
Product: ABC transporter-like protein
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MSTALEISALSKSFAGVQAIRDLSFTVPKGVSTALIGPNGAGKTTVFNMVSGVYGVDAGRITVNGVDVTGMPSRRRIGTG VARSFQNVRLMPHLSVLENLLVGQHVRASSLAALLTPYRLIPNHRWKREARAALEESGLGRWADETVSALPYGVRKRIDL VRATLAGASLLMLDEPAAGLNPSETNALRDHLKALMAKGTTLLVVEHDMHFVESICQNVVVLNFGEKIAEGPLSRVRQDP RVREAYIGSDGEA
Sequences:
>Translated_253_residues MSTALEISALSKSFAGVQAIRDLSFTVPKGVSTALIGPNGAGKTTVFNMVSGVYGVDAGRITVNGVDVTGMPSRRRIGTG VARSFQNVRLMPHLSVLENLLVGQHVRASSLAALLTPYRLIPNHRWKREARAALEESGLGRWADETVSALPYGVRKRIDL VRATLAGASLLMLDEPAAGLNPSETNALRDHLKALMAKGTTLLVVEHDMHFVESICQNVVVLNFGEKIAEGPLSRVRQDP RVREAYIGSDGEA >Mature_252_residues STALEISALSKSFAGVQAIRDLSFTVPKGVSTALIGPNGAGKTTVFNMVSGVYGVDAGRITVNGVDVTGMPSRRRIGTGV ARSFQNVRLMPHLSVLENLLVGQHVRASSLAALLTPYRLIPNHRWKREARAALEESGLGRWADETVSALPYGVRKRIDLV RATLAGASLLMLDEPAAGLNPSETNALRDHLKALMAKGTTLLVVEHDMHFVESICQNVVVLNFGEKIAEGPLSRVRQDPR VREAYIGSDGEA
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0411
COG function: function code E; ABC-type branched-chain amino acid transport systems, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI31657092, Length=232, Percent_Identity=27.1551724137931, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI27881501, Length=207, Percent_Identity=25.1207729468599, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI30795238, Length=207, Percent_Identity=25.1207729468599, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI105990541, Length=221, Percent_Identity=25.7918552036199, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI150417984, Length=216, Percent_Identity=26.3888888888889, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI45446740, Length=215, Percent_Identity=25.1162790697674, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI47078218, Length=215, Percent_Identity=25.1162790697674, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI21536376, Length=221, Percent_Identity=23.9819004524887, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI116734710, Length=226, Percent_Identity=24.7787610619469, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI27477115, Length=214, Percent_Identity=26.6355140186916, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI9955963, Length=233, Percent_Identity=25.3218884120172, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI27436953, Length=233, Percent_Identity=25.7510729613734, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI153792144, Length=209, Percent_Identity=25.8373205741627, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI27262624, Length=219, Percent_Identity=25.5707762557078, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI27262626, Length=219, Percent_Identity=25.5707762557078, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI171184400, Length=219, Percent_Identity=28.310502283105, Blast_Score=65, Evalue=4e-11, Organism=Escherichia coli, GI1789864, Length=254, Percent_Identity=38.9763779527559, Blast_Score=158, Evalue=3e-40, Organism=Escherichia coli, GI1789593, Length=243, Percent_Identity=30.8641975308642, Blast_Score=114, Evalue=6e-27, Organism=Escherichia coli, GI1787370, Length=247, Percent_Identity=30.3643724696356, Blast_Score=109, Evalue=1e-25, Organism=Escherichia coli, GI1790525, Length=239, Percent_Identity=26.3598326359833, Blast_Score=107, Evalue=6e-25, Organism=Escherichia coli, GI1788472, Length=235, Percent_Identity=26.8085106382979, Blast_Score=104, Evalue=5e-24, Organism=Escherichia coli, GI1786872, Length=238, Percent_Identity=28.9915966386555, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI48995001, Length=223, Percent_Identity=30.0448430493274, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1790190, Length=241, Percent_Identity=26.9709543568465, Blast_Score=100, Evalue=8e-23, Organism=Escherichia coli, GI1788761, Length=243, Percent_Identity=30.8641975308642, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI87081709, Length=240, Percent_Identity=27.0833333333333, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1787029, Length=244, Percent_Identity=25.8196721311475, Blast_Score=97, Evalue=9e-22, Organism=Escherichia coli, GI1788210, Length=249, Percent_Identity=26.5060240963855, Blast_Score=97, Evalue=9e-22, Organism=Escherichia coli, GI87081791, Length=256, Percent_Identity=28.125, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI87082267, Length=224, Percent_Identity=32.5892857142857, Blast_Score=94, Evalue=6e-21, Organism=Escherichia coli, GI1786319, Length=229, Percent_Identity=28.3842794759825, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI1787712, Length=248, Percent_Identity=27.4193548387097, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI1789991, Length=230, Percent_Identity=27.8260869565217, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1789672, Length=228, Percent_Identity=24.1228070175439, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1788225, Length=245, Percent_Identity=25.3061224489796, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1790544, Length=242, Percent_Identity=27.2727272727273, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI87081782, Length=255, Percent_Identity=28.6274509803922, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1786398, Length=248, Percent_Identity=28.2258064516129, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1787792, Length=240, Percent_Identity=26.25, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1788450, Length=235, Percent_Identity=27.6595744680851, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788897, Length=224, Percent_Identity=27.2321428571429, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1787089, Length=238, Percent_Identity=25.2100840336134, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1789032, Length=242, Percent_Identity=26.8595041322314, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786253, Length=214, Percent_Identity=30.8411214953271, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786563, Length=256, Percent_Identity=28.125, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1790467, Length=223, Percent_Identity=26.0089686098655, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI1788506, Length=239, Percent_Identity=28.4518828451883, Blast_Score=81, Evalue=7e-17, Organism=Escherichia coli, GI87082268, Length=246, Percent_Identity=26.4227642276423, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI48994943, Length=250, Percent_Identity=24.8, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1789586, Length=262, Percent_Identity=30.5343511450382, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1786703, Length=217, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1787164, Length=225, Percent_Identity=27.1111111111111, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1786803, Length=230, Percent_Identity=26.0869565217391, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788165, Length=224, Percent_Identity=27.2321428571429, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI1787759, Length=260, Percent_Identity=28.4615384615385, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1788053, Length=202, Percent_Identity=31.1881188118812, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI2367384, Length=59, Percent_Identity=52.5423728813559, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1789873, Length=229, Percent_Identity=24.0174672489083, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1790739, Length=228, Percent_Identity=24.1228070175439, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1787143, Length=210, Percent_Identity=28.0952380952381, Blast_Score=64, Evalue=9e-12, Organism=Escherichia coli, GI1787105, Length=241, Percent_Identity=25.3112033195021, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI87081834, Length=210, Percent_Identity=25.2380952380952, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1787547, Length=254, Percent_Identity=24.4094488188976, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1787112, Length=220, Percent_Identity=26.8181818181818, Blast_Score=61, Evalue=8e-11, Organism=Escherichia coli, GI1786345, Length=234, Percent_Identity=25.6410256410256, Blast_Score=61, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17565586, Length=224, Percent_Identity=25.8928571428571, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71983523, Length=234, Percent_Identity=29.4871794871795, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI71983510, Length=234, Percent_Identity=29.4871794871795, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI71983516, Length=234, Percent_Identity=29.4871794871795, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17510237, Length=235, Percent_Identity=24.6808510638298, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI115534520, Length=257, Percent_Identity=27.2373540856031, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI115533608, Length=240, Percent_Identity=26.6666666666667, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI193208177, Length=224, Percent_Identity=27.6785714285714, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24666092, Length=240, Percent_Identity=25.4166666666667, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24648314, Length=237, Percent_Identity=23.6286919831224, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI28573573, Length=240, Percent_Identity=25, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI28573571, Length=240, Percent_Identity=25, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI28574150, Length=224, Percent_Identity=23.6607142857143, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI116007328, Length=224, Percent_Identity=23.6607142857143, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24643674, Length=228, Percent_Identity=23.6842105263158, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI221512771, Length=227, Percent_Identity=23.3480176211454, Blast_Score=71, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 27177; Mature: 27045
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTALEISALSKSFAGVQAIRDLSFTVPKGVSTALIGPNGAGKTTVFNMVSGVYGVDAGR CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCE ITVNGVDVTGMPSRRRIGTGVARSFQNVRLMPHLSVLENLLVGQHVRASSLAALLTPYRL EEEECEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH IPNHRWKREARAALEESGLGRWADETVSALPYGVRKRIDLVRATLAGASLLMLDEPAAGL CCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCC NPSETNALRDHLKALMAKGTTLLVVEHDMHFVESICQNVVVLNFGEKIAEGPLSRVRQDP CCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCEEEEECCHHHHHCHHHHHHCCC RVREAYIGSDGEA CHHHHHCCCCCCC >Mature Secondary Structure STALEISALSKSFAGVQAIRDLSFTVPKGVSTALIGPNGAGKTTVFNMVSGVYGVDAGR CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCE ITVNGVDVTGMPSRRRIGTGVARSFQNVRLMPHLSVLENLLVGQHVRASSLAALLTPYRL EEEECEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH IPNHRWKREARAALEESGLGRWADETVSALPYGVRKRIDLVRATLAGASLLMLDEPAAGL CCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCC NPSETNALRDHLKALMAKGTTLLVVEHDMHFVESICQNVVVLNFGEKIAEGPLSRVRQDP CCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCEEEEECCHHHHHCHHHHHHCCC RVREAYIGSDGEA CHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]