| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154243986
Identifier: 154243986
GI number: 154243986
Start: 27828
End: 29090
Strand: Reverse
Name: 154243986
Synonym: Xaut_0028
Alternate gene names: NA
Gene position: 29090-27828 (Counterclockwise)
Preceding gene: 154243990
Following gene: 154243985
Centisome position: 0.55
GC content: 70.39
Gene sequence:
>1263_bases ATGCTGATCCGCGTTGTTCGCCCGCTGCTACCGACCGTGCTGCTCGCGGTGGCGGCTTTGTGCCCGGTGGCTGGCCTCGG TCTGGCGCAGGCGCAGCAGCCGCAAGCGGATGCCACGGCGCCAGCCGCGGCCAAGCCCGACGCCGAGGCGAAGCCGCTGG AGATCCGCATCGGACTCATCACCCGTGCCGTGCCGCCGCCCCCGCTCTACGACCTCCTGGCGGTGCCGGAAGACGAGGCC GTGGCTGGCGCGGAACTGGCCCTGAAGGACAACACCACCACCGGCCTCTTCACCGGCCAGAGCTTCGCCCTTGAGACCAC CACGCTGGCCGAGGACGACGACCCCGCGGAGGCCGCCCGCGCCCTGGTGGCGAACGGCACCCGCCTCCTCATCGTCAACC TGCCCGGTGCCGAGTTGCTCAAGGTGGCCGATGCGGTGAAGGACAAGGGCGCCGTCCTGTTCAACGTGGGCGCCACCGAC GATGCCCTGCGCGCCGAGGACTGCCGGGCCAACGTGTTCCACGTGGCGCCGAGCCGCGCCATGCTCACCGACGCGCTGGT GCAGTTCCTCGCCACCAAGCGCTGGACCAAGCTGTTCCTCATCACCGGCCCGCAGCCGGCGGACGCCCTCTATGCCGAGG CGCTGCGCCGCTCGGCGAAGAAGTTCGGGCTGAAGATCGTGGCCGACAAGCCCTGGACCTTCGGCCCGCTGGGGCGCGAG CGCTCCGACAGCATCACCCGTTCCGATGCTTTGGTGTTCAGCCGGGGCGTGGACGCGGACGTGATCGTGGTGGCGGACGA GGCCAACGATTTCGGCAATTACATTCCCTTCCGCACCTACGAGCCGCGCCTCGTGGTGGGCACGCAGGGCCTCACCGCCT CCACCTGGCACCCGGCGCAGGATGCCTGGGGCTCGGCGCAATTGCAGAGCCGCTTCCTGCGCTCGGCCTCCCGCACCATG CGGCCGGCGGACTACCAGGCCTGGGTCGCCGCGCGCATGATCGGCGAGGCGACCACACGCACCAAAAGCGCCGACCCCGC CACCCTTGCCGCATTCCTGCGCACGCCGGATTTCAGCCTCGCGGCCTTCAAGGGCGTGCCGGTGAGCATCCGGCCGTGGG ACCAGCAATTGCGCCAGCCGCTGCTCATCGCGCAACCCCTCGACATCGTCTCGGTGGCGCCGGAAGACGGCTTCCTGCAC CAGCGCACCCCCCTCGACACCCTCGGCACCGACGAGGGCGAATCCCGATGCCGCCTGAAATGA
Upstream 100 bases:
>100_bases GATCTATTCGGTTGCACCCCTCAGACGATGGTGTCTAGATCTTCGCCTCTTCGGACGTGGACGCCACGGACCCTGCTCAA GCGATGCTGATTTTGGCCCC
Downstream 100 bases:
>100_bases CGCGGCCTGAAATGACAGCGCGCGAAAAGCGCCACCGTCCGGGAGGACACTTCATGACCCTTCTTCGTCCCCGCCGGCTT GCCGCGCTGCTGGCCGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MLIRVVRPLLPTVLLAVAALCPVAGLGLAQAQQPQADATAPAAAKPDAEAKPLEIRIGLITRAVPPPPLYDLLAVPEDEA VAGAELALKDNTTTGLFTGQSFALETTTLAEDDDPAEAARALVANGTRLLIVNLPGAELLKVADAVKDKGAVLFNVGATD DALRAEDCRANVFHVAPSRAMLTDALVQFLATKRWTKLFLITGPQPADALYAEALRRSAKKFGLKIVADKPWTFGPLGRE RSDSITRSDALVFSRGVDADVIVVADEANDFGNYIPFRTYEPRLVVGTQGLTASTWHPAQDAWGSAQLQSRFLRSASRTM RPADYQAWVAARMIGEATTRTKSADPATLAAFLRTPDFSLAAFKGVPVSIRPWDQQLRQPLLIAQPLDIVSVAPEDGFLH QRTPLDTLGTDEGESRCRLK
Sequences:
>Translated_420_residues MLIRVVRPLLPTVLLAVAALCPVAGLGLAQAQQPQADATAPAAAKPDAEAKPLEIRIGLITRAVPPPPLYDLLAVPEDEA VAGAELALKDNTTTGLFTGQSFALETTTLAEDDDPAEAARALVANGTRLLIVNLPGAELLKVADAVKDKGAVLFNVGATD DALRAEDCRANVFHVAPSRAMLTDALVQFLATKRWTKLFLITGPQPADALYAEALRRSAKKFGLKIVADKPWTFGPLGRE RSDSITRSDALVFSRGVDADVIVVADEANDFGNYIPFRTYEPRLVVGTQGLTASTWHPAQDAWGSAQLQSRFLRSASRTM RPADYQAWVAARMIGEATTRTKSADPATLAAFLRTPDFSLAAFKGVPVSIRPWDQQLRQPLLIAQPLDIVSVAPEDGFLH QRTPLDTLGTDEGESRCRLK >Mature_420_residues MLIRVVRPLLPTVLLAVAALCPVAGLGLAQAQQPQADATAPAAAKPDAEAKPLEIRIGLITRAVPPPPLYDLLAVPEDEA VAGAELALKDNTTTGLFTGQSFALETTTLAEDDDPAEAARALVANGTRLLIVNLPGAELLKVADAVKDKGAVLFNVGATD DALRAEDCRANVFHVAPSRAMLTDALVQFLATKRWTKLFLITGPQPADALYAEALRRSAKKFGLKIVADKPWTFGPLGRE RSDSITRSDALVFSRGVDADVIVVADEANDFGNYIPFRTYEPRLVVGTQGLTASTWHPAQDAWGSAQLQSRFLRSASRTM RPADYQAWVAARMIGEATTRTKSADPATLAAFLRTPDFSLAAFKGVPVSIRPWDQQLRQPLLIAQPLDIVSVAPEDGFLH QRTPLDTLGTDEGESRCRLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45115; Mature: 45115
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIRVVRPLLPTVLLAVAALCPVAGLGLAQAQQPQADATAPAAAKPDAEAKPLEIRIGLI CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE TRAVPPPPLYDLLAVPEDEAVAGAELALKDNTTTGLFTGQSFALETTTLAEDDDPAEAAR ECCCCCCCCHHHEECCCCCCCCCCEEEEECCCCEEEEECCCEEEEEEECCCCCCHHHHHH ALVANGTRLLIVNLPGAELLKVADAVKDKGAVLFNVGATDDALRAEDCRANVFHVAPSRA HHHCCCCEEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHCCCCEEEECCCHH MLTDALVQFLATKRWTKLFLITGPQPADALYAEALRRSAKKFGLKIVADKPWTFGPLGRE HHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCC RSDSITRSDALVFSRGVDADVIVVADEANDFGNYIPFRTYEPRLVVGTQGLTASTWHPAQ CCCCCHHCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCH DAWGSAQLQSRFLRSASRTMRPADYQAWVAARMIGEATTRTKSADPATLAAFLRTPDFSL HCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCE AAFKGVPVSIRPWDQQLRQPLLIAQPLDIVSVAPEDGFLHQRTPLDTLGTDEGESRCRLK EEECCCCEEECCHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLIRVVRPLLPTVLLAVAALCPVAGLGLAQAQQPQADATAPAAAKPDAEAKPLEIRIGLI CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE TRAVPPPPLYDLLAVPEDEAVAGAELALKDNTTTGLFTGQSFALETTTLAEDDDPAEAAR ECCCCCCCCHHHEECCCCCCCCCCEEEEECCCCEEEEECCCEEEEEEECCCCCCHHHHHH ALVANGTRLLIVNLPGAELLKVADAVKDKGAVLFNVGATDDALRAEDCRANVFHVAPSRA HHHCCCCEEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHCCCCEEEECCCHH MLTDALVQFLATKRWTKLFLITGPQPADALYAEALRRSAKKFGLKIVADKPWTFGPLGRE HHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCC RSDSITRSDALVFSRGVDADVIVVADEANDFGNYIPFRTYEPRLVVGTQGLTASTWHPAQ CCCCCHHCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCH DAWGSAQLQSRFLRSASRTMRPADYQAWVAARMIGEATTRTKSADPATLAAFLRTPDFSL HCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCE AAFKGVPVSIRPWDQQLRQPLLIAQPLDIVSVAPEDGFLHQRTPLDTLGTDEGESRCRLK EEECCCCEEECCHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA