| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is phnM [H]
Identifier: 154243973
GI number: 154243973
Start: 16132
End: 17265
Strand: Direct
Name: phnM [H]
Synonym: Xaut_0015
Alternate gene names: 154243973
Gene position: 16132-17265 (Clockwise)
Preceding gene: 154243972
Following gene: 154243975
Centisome position: 0.3
GC content: 72.57
Gene sequence:
>1134_bases ATGGAAACCGTCTACACCAACGCCCGCCTGATCCTCGACGACGAGGTGATCGACGGCACCCTCACCGTCCGCGACGGCAT CATCGTCGCCGTGGATGCGGGCCGCGCCCACGCGCCCTCGGCCACGGACTGCGCCGGCGACTTCATCTCCCCCGGCATCG TCGACCTGCACACCGACGCGCTGGAAGGCCATTTCGTGCCGCGCCCCAAGGTGTTCTGGCCGGATGCGCGGGCCGCCGCG CTGGCCCATGACGGCCAGACGGTGGCGAGCGGCATCACCACCGTGTTCGACGCCATCTGCGCCGGTGGCTTCGACCAGGC CAAGGTGGAGCGGCGCGACCTGTTCGAGCTGATGCTGGACGCGGTGGAGGACGGCGCCGGCCTGTTCCGCGCCCACCACC TCGTCCACCTGCGCTGCGAGATGACGGACCCCGACCTCATGGGATTGGTGGAGCCGGCGCTGGAGCGGTCGACCCTCGCC TTCGCCTCCCTCATGGATCACACCCCCGGCGCCCGGCAGTGGCGCAACGTGGATGTGCTGCGCGGCTTCCTCCTCGGCAT CGGCAAGGATGCGGGGGAGGCCGAGCGGGAGATAGCCGAGCGCACCGCGCGGGGCCGCTCCAACGTGGAGCGCAATTTCG CGCCGCTGGTGGAGATGCTGGCCGCCACTGGCCTCGTGCGCGCCAGCCATGACGACACCACGGACGATCACGTGCGGCTC GCCCAGGAGGCCGGCTGCACGGTGAGCGAGTTTCCCACCACCCGGGAGGCCGCCGCCGCGGCGCGGGCGGCGGGGCTTGC CACCATCGGCGGCGCGCCCAACGTGGTGCGCGGCGGCTCCCATTCCGGCGGCGTCGCCATGGGCGTGCTGGCCGGGGAGG GGCTGGTGGACGCCCTCGCCTCCGACTACGTACCGGCAAGCCTGCTGCAGGCGGCGACGCGGCTGCATCTGGCCGATGGC CTGCCGCTGCCGCGGGCCATGGCCCTGGTCACCCGCAACCCGGCCCAGATGGCCGGGCTTGCCGATCGCGGCCGGCTCGA AGCGGGGCTGCGGGCTGACCTGCTGCGCTTCCGCATCGTGGACACGACGCCCGTGGTGCGTCAGGTGTTGGTGGACGGCG AGCGGGTGTTCTGA
Upstream 100 bases:
>100_bases CTGAGCCCAAGGGGGCGTTCCGGGGGCGTTCCGGGGGCGTGCCGTCACCGCACCGTCACGGTCCGGTGCAAGGCATGCCC CTTTCCGGTACAGAGCCCCC
Downstream 100 bases:
>100_bases GCCGCCGGAGGATTCAGAACAGGGGCGGCACGATACCCACCGGGAAGCCGGCGAGCTTGAGCGTGCCGGTATCGAAGCTG AGCGCGAAGGTGGTGCCCTT
Product: amidohydrolase 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues METVYTNARLILDDEVIDGTLTVRDGIIVAVDAGRAHAPSATDCAGDFISPGIVDLHTDALEGHFVPRPKVFWPDARAAA LAHDGQTVASGITTVFDAICAGGFDQAKVERRDLFELMLDAVEDGAGLFRAHHLVHLRCEMTDPDLMGLVEPALERSTLA FASLMDHTPGARQWRNVDVLRGFLLGIGKDAGEAEREIAERTARGRSNVERNFAPLVEMLAATGLVRASHDDTTDDHVRL AQEAGCTVSEFPTTREAAAAARAAGLATIGGAPNVVRGGSHSGGVAMGVLAGEGLVDALASDYVPASLLQAATRLHLADG LPLPRAMALVTRNPAQMAGLADRGRLEAGLRADLLRFRIVDTTPVVRQVLVDGERVF
Sequences:
>Translated_377_residues METVYTNARLILDDEVIDGTLTVRDGIIVAVDAGRAHAPSATDCAGDFISPGIVDLHTDALEGHFVPRPKVFWPDARAAA LAHDGQTVASGITTVFDAICAGGFDQAKVERRDLFELMLDAVEDGAGLFRAHHLVHLRCEMTDPDLMGLVEPALERSTLA FASLMDHTPGARQWRNVDVLRGFLLGIGKDAGEAEREIAERTARGRSNVERNFAPLVEMLAATGLVRASHDDTTDDHVRL AQEAGCTVSEFPTTREAAAAARAAGLATIGGAPNVVRGGSHSGGVAMGVLAGEGLVDALASDYVPASLLQAATRLHLADG LPLPRAMALVTRNPAQMAGLADRGRLEAGLRADLLRFRIVDTTPVVRQVLVDGERVF >Mature_377_residues METVYTNARLILDDEVIDGTLTVRDGIIVAVDAGRAHAPSATDCAGDFISPGIVDLHTDALEGHFVPRPKVFWPDARAAA LAHDGQTVASGITTVFDAICAGGFDQAKVERRDLFELMLDAVEDGAGLFRAHHLVHLRCEMTDPDLMGLVEPALERSTLA FASLMDHTPGARQWRNVDVLRGFLLGIGKDAGEAEREIAERTARGRSNVERNFAPLVEMLAATGLVRASHDDTTDDHVRL AQEAGCTVSEFPTTREAAAAARAAGLATIGGAPNVVRGGSHSGGVAMGVLAGEGLVDALASDYVPASLLQAATRLHLADG LPLPRAMALVTRNPAQMAGLADRGRLEAGLRADLLRFRIVDTTPVVRQVLVDGERVF
Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]
COG id: COG3454
COG function: function code P; Metal-dependent hydrolase involved in phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790533, Length=380, Percent_Identity=41.3157894736842, Blast_Score=265, Evalue=3e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013108 - InterPro: IPR011059 - InterPro: IPR012696 [H]
Pfam domain/function: PF07969 Amidohydro_3 [H]
EC number: NA
Molecular weight: Translated: 39954; Mature: 39954
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METVYTNARLILDDEVIDGTLTVRDGIIVAVDAGRAHAPSATDCAGDFISPGIVDLHTDA CCEEEECCEEEEECCCCCCEEEEECCEEEEEECCCCCCCCCCHHCHHHCCCCEEEEECHH LEGHFVPRPKVFWPDARAAALAHDGQTVASGITTVFDAICAGGFDQAKVERRDLFELMLD HCCCCCCCCCEECCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AVEDGAGLFRAHHLVHLRCEMTDPDLMGLVEPALERSTLAFASLMDHTPGARQWRNVDVL HHHCCHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHH RGFLLGIGKDAGEAEREIAERTARGRSNVERNFAPLVEMLAATGLVRASHDDTTDDHVRL HHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCEECCCCCCCHHHHHH AQEAGCTVSEFPTTREAAAAARAAGLATIGGAPNVVRGGSHSGGVAMGVLAGEGLVDALA HHHHCCCHHHCCCHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH SDYVPASLLQAATRLHLADGLPLPRAMALVTRNPAQMAGLADRGRLEAGLRADLLRFRIV HCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHCCCCCCHHHHCHHHHHHEEEEE DTTPVVRQVLVDGERVF CCCHHHHHHHHCCCCCC >Mature Secondary Structure METVYTNARLILDDEVIDGTLTVRDGIIVAVDAGRAHAPSATDCAGDFISPGIVDLHTDA CCEEEECCEEEEECCCCCCEEEEECCEEEEEECCCCCCCCCCHHCHHHCCCCEEEEECHH LEGHFVPRPKVFWPDARAAALAHDGQTVASGITTVFDAICAGGFDQAKVERRDLFELMLD HCCCCCCCCCEECCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AVEDGAGLFRAHHLVHLRCEMTDPDLMGLVEPALERSTLAFASLMDHTPGARQWRNVDVL HHHCCHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHH RGFLLGIGKDAGEAEREIAERTARGRSNVERNFAPLVEMLAATGLVRASHDDTTDDHVRL HHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCEECCCCCCCHHHHHH AQEAGCTVSEFPTTREAAAAARAAGLATIGGAPNVVRGGSHSGGVAMGVLAGEGLVDALA HHHHCCCHHHCCCHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH SDYVPASLLQAATRLHLADGLPLPRAMALVTRNPAQMAGLADRGRLEAGLRADLLRFRIV HCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHCCCCCCHHHHCHHHHHHEEEEE DTTPVVRQVLVDGERVF CCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]