| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is pat [H]
Identifier: 154243970
GI number: 154243970
Start: 12683
End: 13225
Strand: Direct
Name: pat [H]
Synonym: Xaut_0012
Alternate gene names: 154243970
Gene position: 12683-13225 (Clockwise)
Preceding gene: 154243967
Following gene: 154243972
Centisome position: 0.24
GC content: 70.53
Gene sequence:
>543_bases ATGCCGATCCGTCCCGCCACTCCCGCCGACATCCCCGCCATCGCCGCCATCTATGACGAGGCCGTGCGCACCGGCACCGC CTCGTTCGAGCTGGCGCCGCCCGGCGTCAGCGAGATGACGCGCCGCCACGCCGCATTGGTGGAGGCGGGCTTTCCGTATC TGGTGATGGACGAGGGCGGGGTGGTGCTGGGCTATGCCTATGTGGGCGCCTTCCGCCCGCGCATCGCCTATCGCCACACC GTGGAGAATTCCATCTATGTGGCACCGGCGGCGCAGGGGCGCGGGGTCGGCCGCGCGCTTTTGGAAGCGCTGATCGCGGC GTGCGAGGCTGCGGGCTTCCGCCAGATGGTGGCGGTGATCGGCGACAGCGCCAATGCCGGCTCCATCGGCCTGCACCGCG CCTGCGGCTTCGCCGACATCGGCATCCTGCCGGCCACCGGCCTGAAGTTCGGCCGGTGGATCGATACGGTGCTCATGCAA CGCCCCCTCGGGCCCGGCTCTGACACCGTGCCCGAGGAAGCGGACCTCAGCTTCAGCGGGTGA
Upstream 100 bases:
>100_bases GATGATCAGAGATCAAGCATCTCGGCGGGATGCCGTTCCATTTCCGGCAGGCACACGACCGCCCTTTTCAGCGCCGGCCC TCCTGCCGTAAAAGCTGGGC
Downstream 100 bases:
>100_bases TCAGCGTGCCCGCGCCGTGGTCGGTGAGCAGTTCCAGCAGCACCGCGTGGGGCACCTTGCCGTCGAGGATGACGACGCCT TCCACGCCCGCCTCCAGGGC
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: PPT N-acetyltransferase; Phosphinothricin-resistance protein [H]
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MPIRPATPADIPAIAAIYDEAVRTGTASFELAPPGVSEMTRRHAALVEAGFPYLVMDEGGVVLGYAYVGAFRPRIAYRHT VENSIYVAPAAQGRGVGRALLEALIAACEAAGFRQMVAVIGDSANAGSIGLHRACGFADIGILPATGLKFGRWIDTVLMQ RPLGPGSDTVPEEADLSFSG
Sequences:
>Translated_180_residues MPIRPATPADIPAIAAIYDEAVRTGTASFELAPPGVSEMTRRHAALVEAGFPYLVMDEGGVVLGYAYVGAFRPRIAYRHT VENSIYVAPAAQGRGVGRALLEALIAACEAAGFRQMVAVIGDSANAGSIGLHRACGFADIGILPATGLKFGRWIDTVLMQ RPLGPGSDTVPEEADLSFSG >Mature_179_residues PIRPATPADIPAIAAIYDEAVRTGTASFELAPPGVSEMTRRHAALVEAGFPYLVMDEGGVVLGYAYVGAFRPRIAYRHTV ENSIYVAPAAQGRGVGRALLEALIAACEAAGFRQMVAVIGDSANAGSIGLHRACGFADIGILPATGLKFGRWIDTVLMQR PLGPGSDTVPEEADLSFSG
Specific function: This enzyme is an effector of phosphinothricin tripeptide (PTT or bialaphos) resistance. Inactivates PTT by transfer of an acetyl group [H]
COG id: COG1247
COG function: function code M; Sortase and related acyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1787719, Length=168, Percent_Identity=41.6666666666667, Blast_Score=121, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.183 [H]
Molecular weight: Translated: 18786; Mature: 18655
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIRPATPADIPAIAAIYDEAVRTGTASFELAPPGVSEMTRRHAALVEAGFPYLVMDEGG CCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCEEEEECCC VVLGYAYVGAFRPRIAYRHTVENSIYVAPAAQGRGVGRALLEALIAACEAAGFRQMVAVI EEEEHHHHHHHCCCHHHEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GDSANAGSIGLHRACGFADIGILPATGLKFGRWIDTVLMQRPLGPGSDTVPEEADLSFSG CCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PIRPATPADIPAIAAIYDEAVRTGTASFELAPPGVSEMTRRHAALVEAGFPYLVMDEGG CCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCEEEEECCC VVLGYAYVGAFRPRIAYRHTVENSIYVAPAAQGRGVGRALLEALIAACEAAGFRQMVAVI EEEEHHHHHHHCCCHHHEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GDSANAGSIGLHRACGFADIGILPATGLKFGRWIDTVLMQRPLGPGSDTVPEEADLSFSG CCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA