BacMap

Definition	Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession	NC_009720
Length	5,308,934

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The map label for this gene is fabG [H]

Identifier: 154243967

GI number: 154243967

Start: 9715

End: 10419

Strand: Direct

Name: fabG [H]

Synonym: Xaut_0009

Alternate gene names: 154243967

Gene position: 9715-10419 (Clockwise)

Preceding gene: 154243966

Following gene: 154243970

Centisome position: 0.18

GC content: 71.63

Gene sequence:

>705_bases
ATGACTGCTTTGGAGCGCGTCGCCGTCGTCACCGGCGGCGGCACGGGGATCGGCCGCGCGGTGGCCGAGCATCTGCTGGC
GGACGGCTATAGGGTGGTGGTGGCCGGGCGCGACCGGGATGACGACCTGCCGGCGGCTATCGGTTTCGCCGAGCTGGATG
TCACCGACGCCAAGGCGGTGGCGGCCTTCGCATCCGGCTTCCCGCGCCTGTCGGCGCTGGTGAACTGCGCCGGCATCATC
CTGCACGAGGGCCGGGAACTGACGCCAGAGGGGTTCGCCAAGGTCATCGACGTGAACCTCAACGGCTCCAACATCACGAC
GCTGGCCTTCCGCGCGGCGCTGGGCGCGGCGGGCGGGGCGGTGGTGAACACCGCCTCCATGTGGAGCTATTTCGGCTCGG
GGCGGAACCCGGCCTATGCGGCGAGCAAGGGCGCCGTCCTCCAGCTCACCCGCTCCCACGCGGTGGGGTTCGCGGCGGAG
GGCATCCGGGTGAACGCGGTGGCGCCGGGCTGGATCGAGACCCGCCTGTCCGCCGGCGCGTTGCAGAACCCCGAGCGGGC
CGGACCCATCATGGCGCGCATCCCCATGCAGCGCTGGGGCAAGCCTTCCGACGTGGCGCAGGTGGTGGGCTTCCTCCTGT
CCCCGGCGGCGGCCTATGTGACGGGGGCCATCATCCCCGTGGATGGTGGCTTCGGCATCGCGTGA

Upstream 100 bases:

>100_bases
TGACCCTCTCCGGCACCGGGCCGGACCTGCTCGCGAACGATCATCTCAGGGCGAGCTATCTGGGGCTGTGAGCCCCGCCG
CCCCATCGGGAGACATCCAC

Downstream 100 bases:

>100_bases
GGGGCGGGTGGGGAGGTGTTTTGCCCGCCGCCTCCCGCCGTCATGCCTTGGCTTGGCCGGGGCACCCATCGCGCCGCGTG
CGGTTTGTGTGAAGGCGGCA

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MTALERVAVVTGGGTGIGRAVAEHLLADGYRVVVAGRDRDDDLPAAIGFAELDVTDAKAVAAFASGFPRLSALVNCAGII
LHEGRELTPEGFAKVIDVNLNGSNITTLAFRAALGAAGGAVVNTASMWSYFGSGRNPAYAASKGAVLQLTRSHAVGFAAE
GIRVNAVAPGWIETRLSAGALQNPERAGPIMARIPMQRWGKPSDVAQVVGFLLSPAAAYVTGAIIPVDGGFGIA

Sequences:

>Translated_234_residues
MTALERVAVVTGGGTGIGRAVAEHLLADGYRVVVAGRDRDDDLPAAIGFAELDVTDAKAVAAFASGFPRLSALVNCAGII
LHEGRELTPEGFAKVIDVNLNGSNITTLAFRAALGAAGGAVVNTASMWSYFGSGRNPAYAASKGAVLQLTRSHAVGFAAE
GIRVNAVAPGWIETRLSAGALQNPERAGPIMARIPMQRWGKPSDVAQVVGFLLSPAAAYVTGAIIPVDGGFGIA
>Mature_233_residues
TALERVAVVTGGGTGIGRAVAEHLLADGYRVVVAGRDRDDDLPAAIGFAELDVTDAKAVAAFASGFPRLSALVNCAGIIL
HEGRELTPEGFAKVIDVNLNGSNITTLAFRAALGAAGGAVVNTASMWSYFGSGRNPAYAASKGAVLQLTRSHAVGFAAEG
IRVNAVAPGWIETRLSAGALQNPERAGPIMARIPMQRWGKPSDVAQVVGFLLSPAAAYVTGAIIPVDGGFGIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=249, Percent_Identity=34.5381526104418, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI7705925, Length=235, Percent_Identity=31.9148936170213, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI40254992, Length=249, Percent_Identity=32.1285140562249, Blast_Score=99, Evalue=3e-21,
Organism=Homo sapiens, GI10190704, Length=243, Percent_Identity=32.0987654320988, Blast_Score=98, Evalue=6e-21,
Organism=Homo sapiens, GI19923817, Length=250, Percent_Identity=32, Blast_Score=97, Evalue=9e-21,
Organism=Homo sapiens, GI32483357, Length=245, Percent_Identity=31.4285714285714, Blast_Score=94, Evalue=8e-20,
Organism=Homo sapiens, GI4758504, Length=249, Percent_Identity=34.136546184739, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI66933014, Length=190, Percent_Identity=33.1578947368421, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI5031737, Length=245, Percent_Identity=31.0204081632653, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI59889578, Length=220, Percent_Identity=32.2727272727273, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI83715985, Length=249, Percent_Identity=30.9236947791165, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI126723750, Length=245, Percent_Identity=28.1632653061224, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI4503301, Length=192, Percent_Identity=29.1666666666667, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI31542939, Length=190, Percent_Identity=28.9473684210526, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI186928839, Length=199, Percent_Identity=30.6532663316583, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI2367175, Length=248, Percent_Identity=38.7096774193548, Blast_Score=124, Evalue=7e-30,
Organism=Escherichia coli, GI87082160, Length=240, Percent_Identity=30, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1789208, Length=240, Percent_Identity=33.75, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1787335, Length=238, Percent_Identity=33.6134453781513, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1790717, Length=167, Percent_Identity=34.7305389221557, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI87082100, Length=171, Percent_Identity=32.1637426900585, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1789378, Length=244, Percent_Identity=30.7377049180328, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1787905, Length=239, Percent_Identity=29.2887029288703, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1786812, Length=239, Percent_Identity=31.3807531380753, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI2367365, Length=243, Percent_Identity=30.4526748971193, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788459, Length=248, Percent_Identity=26.2096774193548, Blast_Score=69, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI25147288, Length=244, Percent_Identity=35.2459016393443, Blast_Score=112, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17555706, Length=242, Percent_Identity=33.4710743801653, Blast_Score=110, Evalue=7e-25,
Organism=Caenorhabditis elegans, GI17560676, Length=243, Percent_Identity=30.8641975308642, Blast_Score=99, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17561402, Length=246, Percent_Identity=30.8943089430894, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17538182, Length=249, Percent_Identity=33.3333333333333, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17538486, Length=261, Percent_Identity=28.735632183908, Blast_Score=91, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17559104, Length=259, Percent_Identity=30.1158301158301, Blast_Score=89, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71994604, Length=253, Percent_Identity=31.2252964426877, Blast_Score=89, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17551412, Length=257, Percent_Identity=29.1828793774319, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17538480, Length=256, Percent_Identity=30.078125, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI115534694, Length=242, Percent_Identity=28.5123966942149, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17562906, Length=265, Percent_Identity=30.188679245283, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI71994600, Length=255, Percent_Identity=29.8039215686275, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17536025, Length=247, Percent_Identity=29.9595141700405, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17562990, Length=253, Percent_Identity=30.4347826086957, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17536651, Length=247, Percent_Identity=29.5546558704453, Blast_Score=81, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17565030, Length=257, Percent_Identity=29.5719844357977, Blast_Score=81, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17560332, Length=261, Percent_Identity=27.5862068965517, Blast_Score=81, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17531453, Length=257, Percent_Identity=31.9066147859922, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17563726, Length=254, Percent_Identity=27.1653543307087, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17560150, Length=255, Percent_Identity=29.8039215686275, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17561272, Length=193, Percent_Identity=32.1243523316062, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17562910, Length=262, Percent_Identity=27.0992366412214, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17562904, Length=258, Percent_Identity=30.2325581395349, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17562908, Length=266, Percent_Identity=29.6992481203008, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193204405, Length=259, Percent_Identity=29.3436293436293, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI72000259, Length=254, Percent_Identity=28.740157480315, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17560220, Length=257, Percent_Identity=26.0700389105058, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6324126, Length=245, Percent_Identity=30.6122448979592, Blast_Score=104, Evalue=9e-24,
Organism=Drosophila melanogaster, GI24643142, Length=237, Percent_Identity=32.0675105485232, Blast_Score=117, Evalue=7e-27,
Organism=Drosophila melanogaster, GI24639444, Length=243, Percent_Identity=32.9218106995885, Blast_Score=107, Evalue=6e-24,
Organism=Drosophila melanogaster, GI23397609, Length=244, Percent_Identity=34.8360655737705, Blast_Score=99, Evalue=2e-21,
Organism=Drosophila melanogaster, GI17737361, Length=252, Percent_Identity=32.1428571428571, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI21355319, Length=250, Percent_Identity=31.6, Blast_Score=91, Evalue=4e-19,
Organism=Drosophila melanogaster, GI28571526, Length=245, Percent_Identity=31.8367346938775, Blast_Score=87, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24644337, Length=169, Percent_Identity=33.7278106508876, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21357041, Length=245, Percent_Identity=31.0204081632653, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24644339, Length=244, Percent_Identity=29.0983606557377, Blast_Score=74, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 23882; Mature: 23750

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALERVAVVTGGGTGIGRAVAEHLLADGYRVVVAGRDRDDDLPAAIGFAELDVTDAKAV
CCCHHEEEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCHHCCEEEECCCHHHHH
AAFASGFPRLSALVNCAGIILHEGRELTPEGFAKVIDVNLNGSNITTLAFRAALGAAGGA
HHHHCCCHHHHHHHHHHHEEEECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCH
VVNTASMWSYFGSGRNPAYAASKGAVLQLTRSHAVGFAAEGIRVNAVAPGWIETRLSAGA
HHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHCCEEEECCEEEEEECCCHHHHHHCCCC
LQNPERAGPIMARIPMQRWGKPSDVAQVVGFLLSPAAAYVTGAIIPVDGGFGIA
CCCCHHCCCEEEECCHHHCCCHHHHHHHHHHHHCCHHHHHCCEEEEECCCCCCC
>Mature Secondary Structure 
TALERVAVVTGGGTGIGRAVAEHLLADGYRVVVAGRDRDDDLPAAIGFAELDVTDAKAV
CCHHEEEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCHHCCEEEECCCHHHHH
AAFASGFPRLSALVNCAGIILHEGRELTPEGFAKVIDVNLNGSNITTLAFRAALGAAGGA
HHHHCCCHHHHHHHHHHHEEEECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCH
VVNTASMWSYFGSGRNPAYAASKGAVLQLTRSHAVGFAAEGIRVNAVAPGWIETRLSAGA
HHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHCCEEEECCEEEEEECCCHHHHHHCCCC
LQNPERAGPIMARIPMQRWGKPSDVAQVVGFLLSPAAAYVTGAIIPVDGGFGIA
CCCCHHCCCEEEECCHHHCCCHHHHHHHHHHHHCCHHHHHCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]