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The map label for this gene is glcF [H]

Identifier: 153952441

GI number: 153952441

Start: 720869

End: 722134

Strand: Direct

Name: glcF [H]

Synonym: JJD26997_0798

Alternate gene names: 153952441

Gene position: 720869-722134 (Clockwise)

Preceding gene: 153952155

Following gene: 153950986

Centisome position: 39.07

GC content: 30.25

Gene sequence:

>1266_bases
ATGAAATTTAGTCAAATAAGTGATGCTTGTGTTAAATGTGGCAAATGTATACCTGTTTGTACTATACATGAAGAAAATCG
CGATGAAATTACTAGTCCAAGAGGATTTTTAGATCTTTTAGCTGCTTATAAAGAGGGAAGTCTAGAACTTGATAAAGAAG
CTAAGAAAGTTTTTGAATCTTGTTTTTTATGCACCAATTGTGTTGAAGTCTGTCCAAGTAAATTAAGAGTAGATAATGCC
ATAGAAGAAGTTCGTTATGATATAGCTAAAAAATTTGGTATAGCTTGGTATAAAAAACTTATTTTTTTCTTTTTAAGAAG
ACGCAAAATTTTAGATTTGGTAGCTAAACTTGGCTATGTGTTTCAAAGTTGTGCGTTTAAAATTCAAAATGAGAATGAAA
ATACAGGTATGAAGGCAAGATTTTCAATGCCTTTTGTTAAAAAGGGAAGATTGCTTACAAGTTTTAATAAAAAAAGTTTC
TTAAATTCTAATCCAAAATTTATCAATAATGATGGAGAAAAAACAATAGGTTTTTTTGTAGGTTGTTTGGCGAATTATTT
TTACATAGATACGGCTAATGCGGTGCTTAAAATCGCTAAGGAATTAAAAATCAATGTGGATTTGATGAAAGAACAAGTGT
GTTGTGGCGCGCCGCAATTTTTTACGGGCGATTTTAAAAGTGTTGAAATTTTGGCTAAAAAAAATATTGAGTATTTTGAA
AAAAAATTAGAAAAATTAGATGCTATTATAGTTCCTGAGGCCACTTGTTCGGCTATGTTAAAGATAGATTATGAACATTT
TTTTATAATGCAAAATGATTTAGACTGGGCAAAACGCGCAAAATGTGTGTCATCTAAGATATATATGGCTAGCGAGTATT
TTTATAAATTCACTTCTTTGGAAGAAATTTTAAAAACAAAAAATAAATTTAATTATAGCATTACTTATCATGATCCTTGC
CATGCAAGAAAAATGCAAGGGGTTTTTAAAGAACCAAGAGAACTTTTAAAAACAAATTATCATTTTGTAGAAATGAGTAA
TTCTAATATTTGTTGCGGTTTTGGCGGAGTGAGTATGCAAACGGATTATTATGATAGAGCTTTAAGTGTAGGGCTTAAAA
AAGCACAAATGATCGATGAAAGTAAGGCTAGTGTGGTAAGTGCCGAATGTTCAGCTTGTAGAATGCAAATTTCAAATGCA
TTGGAACAAAATTCAAGCAAGGTTGTTTTTGCTAGTCCTTTAGAACTTATAGCTAAGGCTTTATAA

Upstream 100 bases:

>100_bases
GAAACAGGTGTTTTGCTTATAAGAAATATTGCTATGTGTTTTGATGCTTATATGAAAAACATTAGTGAAGATAAAAAAGT
ATTCTCAAAAACGGTGTAAG

Downstream 100 bases:

>100_bases
GCCTTAGTCTTATTTGTTGATATCTTCTATATTGGAACGATTTTTTTCAATTAAAGTGCGATTTTTTTGTGTGAATTCTT
TAAGCTCATTAATGTCTTCT

Product: iron-sulfur cluster-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MKFSQISDACVKCGKCIPVCTIHEENRDEITSPRGFLDLLAAYKEGSLELDKEAKKVFESCFLCTNCVEVCPSKLRVDNA
IEEVRYDIAKKFGIAWYKKLIFFFLRRRKILDLVAKLGYVFQSCAFKIQNENENTGMKARFSMPFVKKGRLLTSFNKKSF
LNSNPKFINNDGEKTIGFFVGCLANYFYIDTANAVLKIAKELKINVDLMKEQVCCGAPQFFTGDFKSVEILAKKNIEYFE
KKLEKLDAIIVPEATCSAMLKIDYEHFFIMQNDLDWAKRAKCVSSKIYMASEYFYKFTSLEEILKTKNKFNYSITYHDPC
HARKMQGVFKEPRELLKTNYHFVEMSNSNICCGFGGVSMQTDYYDRALSVGLKKAQMIDESKASVVSAECSACRMQISNA
LEQNSSKVVFASPLELIAKAL

Sequences:

>Translated_421_residues
MKFSQISDACVKCGKCIPVCTIHEENRDEITSPRGFLDLLAAYKEGSLELDKEAKKVFESCFLCTNCVEVCPSKLRVDNA
IEEVRYDIAKKFGIAWYKKLIFFFLRRRKILDLVAKLGYVFQSCAFKIQNENENTGMKARFSMPFVKKGRLLTSFNKKSF
LNSNPKFINNDGEKTIGFFVGCLANYFYIDTANAVLKIAKELKINVDLMKEQVCCGAPQFFTGDFKSVEILAKKNIEYFE
KKLEKLDAIIVPEATCSAMLKIDYEHFFIMQNDLDWAKRAKCVSSKIYMASEYFYKFTSLEEILKTKNKFNYSITYHDPC
HARKMQGVFKEPRELLKTNYHFVEMSNSNICCGFGGVSMQTDYYDRALSVGLKKAQMIDESKASVVSAECSACRMQISNA
LEQNSSKVVFASPLELIAKAL
>Mature_421_residues
MKFSQISDACVKCGKCIPVCTIHEENRDEITSPRGFLDLLAAYKEGSLELDKEAKKVFESCFLCTNCVEVCPSKLRVDNA
IEEVRYDIAKKFGIAWYKKLIFFFLRRRKILDLVAKLGYVFQSCAFKIQNENENTGMKARFSMPFVKKGRLLTSFNKKSF
LNSNPKFINNDGEKTIGFFVGCLANYFYIDTANAVLKIAKELKINVDLMKEQVCCGAPQFFTGDFKSVEILAKKNIEYFE
KKLEKLDAIIVPEATCSAMLKIDYEHFFIMQNDLDWAKRAKCVSSKIYMASEYFYKFTSLEEILKTKNKFNYSITYHDPC
HARKMQGVFKEPRELLKTNYHFVEMSNSNICCGFGGVSMQTDYYDRALSVGLKKAQMIDESKASVVSAECSACRMQISNA
LEQNSSKVVFASPLELIAKAL

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788576, Length=424, Percent_Identity=22.6415094339623, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1786497, Length=235, Percent_Identity=23.8297872340426, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR012257 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 48083; Mature: 48083

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFSQISDACVKCGKCIPVCTIHEENRDEITSPRGFLDLLAAYKEGSLELDKEAKKVFES
CCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEECHHHHHHHHH
CFLCTNCVEVCPSKLRVDNAIEEVRYDIAKKFGIAWYKKLIFFFLRRRKILDLVAKLGYV
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FQSCAFKIQNENENTGMKARFSMPFVKKGRLLTSFNKKSFLNSNPKFINNDGEKTIGFFV
HHHHHHEECCCCCCCCCEEEECCCHHHCCCCCCCCCHHHHCCCCCCEECCCCCHHHHHHH
GCLANYFYIDTANAVLKIAKELKINVDLMKEQVCCGAPQFFTGDFKSVEILAKKNIEYFE
HHHHHHEEEECHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHH
KKLEKLDAIIVPEATCSAMLKIDYEHFFIMQNDLDWAKRAKCVSSKIYMASEYFYKFTSL
HHHHHHCEEECCCHHHHHEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EEILKTKNKFNYSITYHDPCHARKMQGVFKEPRELLKTNYHFVEMSNSNICCGFGGVSMQ
HHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCC
TDYYDRALSVGLKKAQMIDESKASVVSAECSACRMQISNALEQNSSKVVFASPLELIAKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHC
L
C
>Mature Secondary Structure
MKFSQISDACVKCGKCIPVCTIHEENRDEITSPRGFLDLLAAYKEGSLELDKEAKKVFES
CCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEECHHHHHHHHH
CFLCTNCVEVCPSKLRVDNAIEEVRYDIAKKFGIAWYKKLIFFFLRRRKILDLVAKLGYV
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FQSCAFKIQNENENTGMKARFSMPFVKKGRLLTSFNKKSFLNSNPKFINNDGEKTIGFFV
HHHHHHEECCCCCCCCCEEEECCCHHHCCCCCCCCCHHHHCCCCCCEECCCCCHHHHHHH
GCLANYFYIDTANAVLKIAKELKINVDLMKEQVCCGAPQFFTGDFKSVEILAKKNIEYFE
HHHHHHEEEECHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHH
KKLEKLDAIIVPEATCSAMLKIDYEHFFIMQNDLDWAKRAKCVSSKIYMASEYFYKFTSL
HHHHHHCEEECCCHHHHHEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EEILKTKNKFNYSITYHDPCHARKMQGVFKEPRELLKTNYHFVEMSNSNICCGFGGVSMQ
HHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCC
TDYYDRALSVGLKKAQMIDESKASVVSAECSACRMQISNALEQNSSKVVFASPLELIAKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]