| Definition | Campylobacter jejuni subsp. doylei 269.97, complete genome. |
|---|---|
| Accession | NC_009707 |
| Length | 1,845,106 |
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The map label for this gene is iaaA [H]
Identifier: 153952392
GI number: 153952392
Start: 1576810
End: 1577841
Strand: Direct
Name: iaaA [H]
Synonym: JJD26997_1791
Alternate gene names: 153952392
Gene position: 1576810-1577841 (Clockwise)
Preceding gene: 153952316
Following gene: 153952112
Centisome position: 85.46
GC content: 42.54
Gene sequence:
>1032_bases ATGAAAATTCTAAACATAGGTGCAAAAGCCTTTTTTTTAATGGCAAGTTTAGGCTGTTTAAATACCGCCCTAGTTGCTAA GGACATCAAACCCATCATCGTCATACACGGAGGCACAAGTGGTCTAGGTTTAAGCAAGGAAGAATTTGCCAAACGCGAAG TTGTGATGAAGCAAAGTTTAAAGGCAGGGCAGAAAATTTTAGAACAGGGTGGAAGTGCTACTGATGCAGTGATTGCAACG ATTAAGGTTATGGAAGATAGCGAAGAATTTAATGCAGGAAAGGGAGCAGTATTTACAGCGGATGGTTTTAATGAGCTTGA TGCTTCCTTGATGGAAGGTAAGGGCAAAAAAGCAGGAGCCATAGCTATGGCAAGAACGATTAAAAATCCTATCGAAGCGG CTAGAGTAGTGATGGAAAAAACGCCTCACACACTCATAGCAGGAGAGGGAGCGGACAAGTTAGCTAAAGAAAATGAACTT GAAATTGTGTCGCAAAAATACTTTTACACCCCGCACCGCTATAAGCAACTTGAAGATGCCAAAAAGAGCAAAGAAATTCT ACTCGATAGTGATAAGGCAAAGGCACATTTGGGTAATTATACTGAGCCTTATTTGGGTACTGTAGGTGCCATAGCCTTAG ACAAGGAAGGGAATTTAGCCGCTGGGACAAGCACGGGTGGCACGACTAATAAAATGACAGGACGCATAGGCGATTCGCCT ATTATCGGGGCGGGTAATTACGCAGATAATGATTCTGTGGCTATTTCTTGCACAGGCACGGGCGATATTTTCATAAGATC TATTGCAGCTTATAAAGTGTCCGCTCTTTATAAATATAAAAAATTATCCGTGCAAAAAGCAGCCGAGCAAAGTATAGATG AAGTGGCGAAATTAGGCGGAACGGGTGGCATTATCTCTATCGATAAAAACGGCAATGTAGGCTATGCTTGGACTAAGGAT AAACTAGGAATGTATCACGGCGAAGCCAGGGTGGGTCAAGAACCTAGGGTCTTTTTTCCCGTTGCTAAGTAA
Upstream 100 bases:
>100_bases GTAACATTCTTTCAATTAAAATTTAAGAAATATTAAATTTTAAATAGTTTATTATGAATAATAAAATATTAATATTTTAT AAGCTAAACAAGGAGTAAAA
Downstream 100 bases:
>100_bases GCACACAGAAGTGCAAATTAGCCTAAGCCTCGAGTTTTAGGACAAGAATATTGTCCTAAACACCTTAGCGTTAGTTAAAT TTTTATCCTAAGTCTTAAAA
Product: putative L-asparaginase
Products: NA
Alternate protein names: Beta-aspartyl-peptidase; Isoaspartyl dipeptidase [H]
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MKILNIGAKAFFLMASLGCLNTALVAKDIKPIIVIHGGTSGLGLSKEEFAKREVVMKQSLKAGQKILEQGGSATDAVIAT IKVMEDSEEFNAGKGAVFTADGFNELDASLMEGKGKKAGAIAMARTIKNPIEAARVVMEKTPHTLIAGEGADKLAKENEL EIVSQKYFYTPHRYKQLEDAKKSKEILLDSDKAKAHLGNYTEPYLGTVGAIALDKEGNLAAGTSTGGTTNKMTGRIGDSP IIGAGNYADNDSVAISCTGTGDIFIRSIAAYKVSALYKYKKLSVQKAAEQSIDEVAKLGGTGGIISIDKNGNVGYAWTKD KLGMYHGEARVGQEPRVFFPVAK
Sequences:
>Translated_343_residues MKILNIGAKAFFLMASLGCLNTALVAKDIKPIIVIHGGTSGLGLSKEEFAKREVVMKQSLKAGQKILEQGGSATDAVIAT IKVMEDSEEFNAGKGAVFTADGFNELDASLMEGKGKKAGAIAMARTIKNPIEAARVVMEKTPHTLIAGEGADKLAKENEL EIVSQKYFYTPHRYKQLEDAKKSKEILLDSDKAKAHLGNYTEPYLGTVGAIALDKEGNLAAGTSTGGTTNKMTGRIGDSP IIGAGNYADNDSVAISCTGTGDIFIRSIAAYKVSALYKYKKLSVQKAAEQSIDEVAKLGGTGGIISIDKNGNVGYAWTKD KLGMYHGEARVGQEPRVFFPVAK >Mature_343_residues MKILNIGAKAFFLMASLGCLNTALVAKDIKPIIVIHGGTSGLGLSKEEFAKREVVMKQSLKAGQKILEQGGSATDAVIAT IKVMEDSEEFNAGKGAVFTADGFNELDASLMEGKGKKAGAIAMARTIKNPIEAARVVMEKTPHTLIAGEGADKLAKENEL EIVSQKYFYTPHRYKQLEDAKKSKEILLDSDKAKAHLGNYTEPYLGTVGAIALDKEGNLAAGTSTGGTTNKMTGRIGDSP IIGAGNYADNDSVAISCTGTGDIFIRSIAAYKVSALYKYKKLSVQKAAEQSIDEVAKLGGTGGIISIDKNGNVGYAWTKD KLGMYHGEARVGQEPRVFFPVAK
Specific function: Degrades proteins damaged by L-isoaspartyl residue formation (also known as beta-Asp residues). Degrades L- isoaspartyl-containing di- and tripeptides. Acts best on iso-Asp- Leu, followed by iso-Asp-Ala, -His and to a lesser extent iso-Asp- Lys, -Phe and
COG id: COG1446
COG function: function code E; Asparaginase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ntn-hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI145275202, Length=295, Percent_Identity=38.6440677966102, Blast_Score=191, Evalue=7e-49, Organism=Homo sapiens, GI145275200, Length=295, Percent_Identity=38.6440677966102, Blast_Score=191, Evalue=7e-49, Organism=Homo sapiens, GI98991769, Length=268, Percent_Identity=30.5970149253731, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI285002251, Length=290, Percent_Identity=30.3448275862069, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI285002253, Length=290, Percent_Identity=28.9655172413793, Blast_Score=82, Evalue=7e-16, Organism=Escherichia coli, GI1787050, Length=311, Percent_Identity=45.6591639871383, Blast_Score=260, Evalue=9e-71, Organism=Caenorhabditis elegans, GI17569239, Length=241, Percent_Identity=28.2157676348548, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI18921183, Length=304, Percent_Identity=37.171052631579, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI21357893, Length=266, Percent_Identity=31.5789473684211, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI24652135, Length=239, Percent_Identity=33.0543933054393, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI221330102, Length=242, Percent_Identity=32.6446280991736, Blast_Score=99, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000246 [H]
Pfam domain/function: PF01112 Asparaginase_2 [H]
EC number: =3.4.19.5 [H]
Molecular weight: Translated: 36402; Mature: 36402
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILNIGAKAFFLMASLGCLNTALVAKDIKPIIVIHGGTSGLGLSKEEFAKREVVMKQSL CEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH KAGQKILEQGGSATDAVIATIKVMEDSEEFNAGKGAVFTADGFNELDASLMEGKGKKAGA HHHHHHHHCCCCCCHHHEEEEEEEECCHHCCCCCCEEEEECCCHHHHHHHHHCCCCCCHH IAMARTIKNPIEAARVVMEKTPHTLIAGEGADKLAKENELEIVSQKYFYTPHRYKQLEDA HHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCCHHEEHHHHCCCCHHHHHHHHH KKSKEILLDSDKAKAHLGNYTEPYLGTVGAIALDKEGNLAAGTSTGGTTNKMTGRIGDSP HHHHHEEEECCCHHHHCCCCCCCHHCCCEEEEECCCCCEEECCCCCCCCCCEECCCCCCC IIGAGNYADNDSVAISCTGTGDIFIRSIAAYKVSALYKYKKLSVQKAAEQSIDEVAKLGG EEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TGGIISIDKNGNVGYAWTKDKLGMYHGEARVGQEPRVFFPVAK CCCEEEEECCCCEEEEEECCCCCCEECCHHCCCCCCEEEECCC >Mature Secondary Structure MKILNIGAKAFFLMASLGCLNTALVAKDIKPIIVIHGGTSGLGLSKEEFAKREVVMKQSL CEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH KAGQKILEQGGSATDAVIATIKVMEDSEEFNAGKGAVFTADGFNELDASLMEGKGKKAGA HHHHHHHHCCCCCCHHHEEEEEEEECCHHCCCCCCEEEEECCCHHHHHHHHHCCCCCCHH IAMARTIKNPIEAARVVMEKTPHTLIAGEGADKLAKENELEIVSQKYFYTPHRYKQLEDA HHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCCHHEEHHHHCCCCHHHHHHHHH KKSKEILLDSDKAKAHLGNYTEPYLGTVGAIALDKEGNLAAGTSTGGTTNKMTGRIGDSP HHHHHEEEECCCHHHHCCCCCCCHHCCCEEEEECCCCCEEECCCCCCCCCCEECCCCCCC IIGAGNYADNDSVAISCTGTGDIFIRSIAAYKVSALYKYKKLSVQKAAEQSIDEVAKLGG EEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TGGIISIDKNGNVGYAWTKDKLGMYHGEARVGQEPRVFFPVAK CCCEEEEECCCCEEEEEECCCCCCEECCHHCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]