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The map label for this gene is degT [H]

Identifier: 153952295

GI number: 153952295

Start: 1270653

End: 1271726

Strand: Direct

Name: degT [H]

Synonym: JJD26997_1430

Alternate gene names: 153952295

Gene position: 1270653-1271726 (Clockwise)

Preceding gene: 153951487

Following gene: 153951743

Centisome position: 68.87

GC content: 31.84

Gene sequence:

>1074_bases
ATGAATTTTATTAATCTTCAAGCTCAATATCTCGCATACAAAGATGAAATCAATGTTGAAATTGAAAGTGTTTTATCAAA
CTCTTCTTTTATAGGCGGTGCAAAGCTTAATGAATTTGAGCAAAATTTAGCTCATTTTGTAAATATTAAACATGCTATAG
GTTGTTCAAGTGGAACTAGTGCTTTATATCTTGCCTTAAGAGCCTTAGATATTGGCAAAGATGATGAAGTTATAGTGCCT
AGTTTTACTTTCATAGCAACAGCTGAAGTTGTGGCTTTAGTAGGCGCAAAACCTGTTTTTGTAGATATAAATTTATCAAA
TTACAATCTTGATTTTGAAGCAGTACAAAAAGCAATAACCCCAAAAACTAAAGCTGTTATAGCAGTAAGTATGTTTGGAC
AAATGAGTGATTTAAGAACTTTAGAAGAAATTTTAAAAAATAAAGATATCACTTTGATCGAAGATGGTGCACAAAGTTTT
GGCGCAAGTTTCAAAGGAGAAAAATCCTGCTCTATAGCTAAAATTTCATGCACGAGCTTTTTTCCTTCGAAACCTTTGGG
AGCTTACGGCGATGGCGGGGCTATTTTTTGTCATGATGATGAAATTGCTAAAAAAATAAGAATTTTACTCAATCACGGAC
AAACTCAGCGTTATAAACATGAATTTATAGGTATGAATGGACGCCTTGATACCTTACAAGCGGCGATTTTAAATGTTAAG
TTAAAATACCTAGAAAAAGAATTAGGCAAAAGACAAAAATTAGCACAAATTTATAATGCAAATTTAAAAAACTGCCAAAT
TCCGCAAATTGATCCAAATGCTTTTAGCGCTTATGCGCAATACAGCGTTTTGGTTGAAGATAGAGCTAGTGTATTGCAAA
AATTTGAAAAGGCTAATATACCTTATGCTATACACTATCCAACCCCTTTGCATAAACAACCTTGCTTTAGTGAGTTTTCA
AATTTAAAACTTAAAATTTCAGAATATACAAGCGAACACATCTTATCTTTGCCTTTTTCACCTTTTTTAAGCGAAGAAGA
ACAAGAGCAAATTATTTGTATTTTTAAAGATTAA

Upstream 100 bases:

>100_bases
AAATTTTTATAAAAGCATATCATACCAAAATTACTTTAAATTAAGTAAAACTAAAATACAATAAAATTTTAATTTTATAT
CATTAATTTCAAGGTGTTTT

Downstream 100 bases:

>100_bases
TTCCATGAAAATAGGTATCATAGGCCTTGGAAAAATGGGGCAAAACCACTTAAATGAACTTAGTAAAAATTCTCATTTTA
AACTTAATGCACTTTTTGAT

Product: DegT/DnrJ/EryC1/StrS aminotransferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MNFINLQAQYLAYKDEINVEIESVLSNSSFIGGAKLNEFEQNLAHFVNIKHAIGCSSGTSALYLALRALDIGKDDEVIVP
SFTFIATAEVVALVGAKPVFVDINLSNYNLDFEAVQKAITPKTKAVIAVSMFGQMSDLRTLEEILKNKDITLIEDGAQSF
GASFKGEKSCSIAKISCTSFFPSKPLGAYGDGGAIFCHDDEIAKKIRILLNHGQTQRYKHEFIGMNGRLDTLQAAILNVK
LKYLEKELGKRQKLAQIYNANLKNCQIPQIDPNAFSAYAQYSVLVEDRASVLQKFEKANIPYAIHYPTPLHKQPCFSEFS
NLKLKISEYTSEHILSLPFSPFLSEEEQEQIICIFKD

Sequences:

>Translated_357_residues
MNFINLQAQYLAYKDEINVEIESVLSNSSFIGGAKLNEFEQNLAHFVNIKHAIGCSSGTSALYLALRALDIGKDDEVIVP
SFTFIATAEVVALVGAKPVFVDINLSNYNLDFEAVQKAITPKTKAVIAVSMFGQMSDLRTLEEILKNKDITLIEDGAQSF
GASFKGEKSCSIAKISCTSFFPSKPLGAYGDGGAIFCHDDEIAKKIRILLNHGQTQRYKHEFIGMNGRLDTLQAAILNVK
LKYLEKELGKRQKLAQIYNANLKNCQIPQIDPNAFSAYAQYSVLVEDRASVLQKFEKANIPYAIHYPTPLHKQPCFSEFS
NLKLKISEYTSEHILSLPFSPFLSEEEQEQIICIFKD
>Mature_357_residues
MNFINLQAQYLAYKDEINVEIESVLSNSSFIGGAKLNEFEQNLAHFVNIKHAIGCSSGTSALYLALRALDIGKDDEVIVP
SFTFIATAEVVALVGAKPVFVDINLSNYNLDFEAVQKAITPKTKAVIAVSMFGQMSDLRTLEEILKNKDITLIEDGAQSF
GASFKGEKSCSIAKISCTSFFPSKPLGAYGDGGAIFCHDDEIAKKIRILLNHGQTQRYKHEFIGMNGRLDTLQAAILNVK
LKYLEKELGKRQKLAQIYNANLKNCQIPQIDPNAFSAYAQYSVLVEDRASVLQKFEKANIPYAIHYPTPLHKQPCFSEFS
NLKLKISEYTSEHILSLPFSPFLSEEEQEQIICIFKD

Specific function: This membrane protein may function as a sensor protein and may transfer the signal of environmental stimuli to the regulatory region of target genes to activate or repress transcription of the genes [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=358, Percent_Identity=28.2122905027933, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI2367285, Length=354, Percent_Identity=29.3785310734463, Blast_Score=133, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 39785; Mature: 39785

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFINLQAQYLAYKDEINVEIESVLSNSSFIGGAKLNEFEQNLAHFVNIKHAIGCSSGTS
CCEEEEEEEEEEECCCCCEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH
ALYLALRALDIGKDDEVIVPSFTFIATAEVVALVGAKPVFVDINLSNYNLDFEAVQKAIT
HHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHC
PKTKAVIAVSMFGQMSDLRTLEEILKNKDITLIEDGAQSFGASFKGEKSCSIAKISCTSF
CCHHHEEEEHHHHCHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCCCCEEEEEECCC
FPSKPLGAYGDGGAIFCHDDEIAKKIRILLNHGQTQRYKHEFIGMNGRLDTLQAAILNVK
CCCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHH
LKYLEKELGKRQKLAQIYNANLKNCQIPQIDPNAFSAYAQYSVLVEDRASVLQKFEKANI
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHEEEHHHHHHHHHHHHHCCC
PYAIHYPTPLHKQPCFSEFSNLKLKISEYTSEHILSLPFSPFLSEEEQEQIICIFKD
CEEEECCCCCCCCCCHHHHCCCEEEEECCCCCCEEECCCCHHCCCCCCCEEEEEEEC
>Mature Secondary Structure
MNFINLQAQYLAYKDEINVEIESVLSNSSFIGGAKLNEFEQNLAHFVNIKHAIGCSSGTS
CCEEEEEEEEEEECCCCCEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH
ALYLALRALDIGKDDEVIVPSFTFIATAEVVALVGAKPVFVDINLSNYNLDFEAVQKAIT
HHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHC
PKTKAVIAVSMFGQMSDLRTLEEILKNKDITLIEDGAQSFGASFKGEKSCSIAKISCTSF
CCHHHEEEEHHHHCHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCCCCEEEEEECCC
FPSKPLGAYGDGGAIFCHDDEIAKKIRILLNHGQTQRYKHEFIGMNGRLDTLQAAILNVK
CCCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHH
LKYLEKELGKRQKLAQIYNANLKNCQIPQIDPNAFSAYAQYSVLVEDRASVLQKFEKANI
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHEEEHHHHHHHHHHHHHCCC
PYAIHYPTPLHKQPCFSEFSNLKLKISEYTSEHILSLPFSPFLSEEEQEQIICIFKD
CEEEECCCCCCCCCCHHHHCCCEEEEECCCCCCEEECCCCHHCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2104607 [H]