Click here to switch to the map view.

The map label for this gene is ctb [H]

Identifier: 153952285

GI number: 153952285

Start: 1307688

End: 1308071

Strand: Direct

Name: ctb [H]

Synonym: JJD26997_1475

Alternate gene names: 153952285

Gene position: 1307688-1308071 (Clockwise)

Preceding gene: 153951454

Following gene: 153951780

Centisome position: 70.87

GC content: 30.47

Gene sequence:

>384_bases
ATGAAATTTGAAACAATTAATCAAGAAAGCATAGCAAAACTTATGGAAATATTTTATGAAAAAGTTAGAAAAGACAAGGA
TTTAGGTCCTATTTTTAACAATGCTATTGGAACAAGCGATGAAGAATGGAAAGATCATAAAGCAAAAATAGGAAATTTTT
GGGCAGGCATGCTTTTAGGCCAAGGTGATTATAATGGGCAACCCTTAAAAAAGCATCTAGATCTACCTCCTTTTCCTCAA
GAATTTTTTGAAGTTTGGCTAAAACTTTTTGAAGAAAGTTTAAATATGGTTTATAATGAAGAAATGAAAAATGTCATTTT
ACAACGTGCTCAAATGATAGCCTCACATTTTCAAAATATGCTCTATAAATACGGCGGACATTAA

Upstream 100 bases:

>100_bases
TCTTTCATTATATATTTTCCATTCTTAACTTATGTTAAATTTAATTTATCTTATTTTCGCTATATTAACGCCATAAAATT
AACATTTAAGAAAGGCTTAT

Downstream 100 bases:

>100_bases
TTTGGCAATTTTTTTGTCAAATCTTTTTTTACCTCTTCTAAAATCTTTTCATCCTTAGAAAAATCAAAAAATTTAAACTC
ATTTCCATGCTGCATAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Cj-trHbP; Truncated Hb [H]

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MKFETINQESIAKLMEIFYEKVRKDKDLGPIFNNAIGTSDEEWKDHKAKIGNFWAGMLLGQGDYNGQPLKKHLDLPPFPQ
EFFEVWLKLFEESLNMVYNEEMKNVILQRAQMIASHFQNMLYKYGGH

Sequences:

>Translated_127_residues
MKFETINQESIAKLMEIFYEKVRKDKDLGPIFNNAIGTSDEEWKDHKAKIGNFWAGMLLGQGDYNGQPLKKHLDLPPFPQ
EFFEVWLKLFEESLNMVYNEEMKNVILQRAQMIASHFQNMLYKYGGH
>Mature_127_residues
MKFETINQESIAKLMEIFYEKVRKDKDLGPIFNNAIGTSDEEWKDHKAKIGNFWAGMLLGQGDYNGQPLKKHLDLPPFPQ
EFFEVWLKLFEESLNMVYNEEMKNVILQRAQMIASHFQNMLYKYGGH

Specific function: Has been suggested to be involved in cytochrome c peroxidase or P450-like oxygen chemistry or cyanide detoxification. The high oxygen affinity of this protein suggests that it probably does not function as an oxygen transporter [H]

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group III subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR001486 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 14962; Mature: 14962

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFETINQESIAKLMEIFYEKVRKDKDLGPIFNNAIGTSDEEWKDHKAKIGNFWAGMLLG
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
QGDYNGQPLKKHLDLPPFPQEFFEVWLKLFEESLNMVYNEEMKNVILQRAQMIASHFQNM
CCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYKYGGH
HHHHCCC
>Mature Secondary Structure
MKFETINQESIAKLMEIFYEKVRKDKDLGPIFNNAIGTSDEEWKDHKAKIGNFWAGMLLG
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
QGDYNGQPLKKHLDLPPFPQEFFEVWLKLFEESLNMVYNEEMKNVILQRAQMIASHFQNM
CCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYKYGGH
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10688204 [H]