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The map label for this gene is ybgK [C]

Identifier: 153952182

GI number: 153952182

Start: 1676274

End: 1677239

Strand: Direct

Name: ybgK [C]

Synonym: JJD26997_1902

Alternate gene names: 153952182

Gene position: 1676274-1677239 (Clockwise)

Preceding gene: 153951517

Following gene: 153952332

Centisome position: 90.85

GC content: 31.16

Gene sequence:

>966_bases
ATGAGTATAAAAATCATTGAAGCATCTATAAATTCAAGTTTGCAAGACTTTGGTAGAAAAAAATTTGCTAAATTTGGCAT
AGCAAGAAGTGGGGCTATGGATGAAGATGCCTTAAGAATGGCAAATATCTTACTTGGAAACAAACAAGATGAAGCAGGAA
TTGAGCTTTGTTTAAAGGGTGGAAAATATAAATTTTTAGATGAGAATTATTTTGTTTTAAGTGGGGCTGAATTTGAAGCA
AAGCTTAATAATCAAAAAATCAAAACTTGCAAGGTATATAAAGCAAATAAAGGCGATATTTTAGAACTTGATTTAGCAAA
AATAGGTTTTCGTGGATATTTATGCGTAGCAGGTGGCTTTGAAATAAAAAGTTTTTTAAATTCTAAATCCAGCGATGTTA
AAATGGGAGTTGGAATTTTTGAAGGAAGAGCTTTACAAAAAGATGATATTTTAGTTTCTAAAGATAAATTTATCCCGTTT
AATTTAAGATTAAGAGAATGTGAAAATCCTCTTTTTAAAAGCCCTAAAGAGCCTATTGTACGCGTTATTTTAGGAACAAA
TGAAGATGCTTTTACCCAAAAAGGCATAGAAACTTTTTTAAATACTACTTATAAAGTGGGTTCAAAAAGTGATAGAATGG
CAATTTATGCAGAATCTGGCAAAAGCATAGAGCATAAAAACTCAGCAGATATTATCTCAGATCCTGCAGTTTTTGGAAGC
ATACAAGTGCCAAAAAGTGGCATTCCTATCATTTTAATGGCAGCAAGACAAAGCACAGGAGGCTATACAAAAATAGCCAC
GGTTATAGAAAATGATCTAAACTTACTCGCACAAGCTAAGTTAGGCTCTAGCTTTAAATTTCGAAGCATTAGTATGCAAG
AAGCCTTAGAACTTTATAAACAAAGAGAAATGAAATTTAAAGCTATGGATCAAAAAATCAATCTTGATTTTGAAAATTTG
ATCTAA

Upstream 100 bases:

>100_bases
TTAAAAGCGGGTATGTTTTTAAAATTTAAAGCCATTTCAAAAGATGAATTTTTCAAGATCCAAGAACAAGTTGCTAAAAA
AGTCTATCAAAAGGAAATTT

Downstream 100 bases:

>100_bases
GCTTTTTTACCATAAATATTGATAAAATATATGGCACCTATAGCCAAGACACAACCTAACAAGGTAAGCGCATTTGGCAC
CTCATCTAGTATAAAATAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MSIKIIEASINSSLQDFGRKKFAKFGIARSGAMDEDALRMANILLGNKQDEAGIELCLKGGKYKFLDENYFVLSGAEFEA
KLNNQKIKTCKVYKANKGDILELDLAKIGFRGYLCVAGGFEIKSFLNSKSSDVKMGVGIFEGRALQKDDILVSKDKFIPF
NLRLRECENPLFKSPKEPIVRVILGTNEDAFTQKGIETFLNTTYKVGSKSDRMAIYAESGKSIEHKNSADIISDPAVFGS
IQVPKSGIPIILMAARQSTGGYTKIATVIENDLNLLAQAKLGSSFKFRSISMQEALELYKQREMKFKAMDQKINLDFENL
I

Sequences:

>Translated_321_residues
MSIKIIEASINSSLQDFGRKKFAKFGIARSGAMDEDALRMANILLGNKQDEAGIELCLKGGKYKFLDENYFVLSGAEFEA
KLNNQKIKTCKVYKANKGDILELDLAKIGFRGYLCVAGGFEIKSFLNSKSSDVKMGVGIFEGRALQKDDILVSKDKFIPF
NLRLRECENPLFKSPKEPIVRVILGTNEDAFTQKGIETFLNTTYKVGSKSDRMAIYAESGKSIEHKNSADIISDPAVFGS
IQVPKSGIPIILMAARQSTGGYTKIATVIENDLNLLAQAKLGSSFKFRSISMQEALELYKQREMKFKAMDQKINLDFENL
I
>Mature_320_residues
SIKIIEASINSSLQDFGRKKFAKFGIARSGAMDEDALRMANILLGNKQDEAGIELCLKGGKYKFLDENYFVLSGAEFEAK
LNNQKIKTCKVYKANKGDILELDLAKIGFRGYLCVAGGFEIKSFLNSKSSDVKMGVGIFEGRALQKDDILVSKDKFIPFN
LRLRECENPLFKSPKEPIVRVILGTNEDAFTQKGIETFLNTTYKVGSKSDRMAIYAESGKSIEHKNSADIISDPAVFGSI
QVPKSGIPIILMAARQSTGGYTKIATVIENDLNLLAQAKLGSSFKFRSISMQEALELYKQREMKFKAMDQKINLDFENLI

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=313, Percent_Identity=31.9488817891374, Blast_Score=174, Evalue=7e-45,
Organism=Saccharomyces cerevisiae, GI6319685, Length=333, Percent_Identity=27.027027027027, Blast_Score=110, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778
- InterPro:   IPR002130 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 35697; Mature: 35566

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKIIEASINSSLQDFGRKKFAKFGIARSGAMDEDALRMANILLGNKQDEAGIELCLKG
CEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEC
GKYKFLDENYFVLSGAEFEAKLNNQKIKTCKVYKANKGDILELDLAKIGFRGYLCVAGGF
CCEEEECCCEEEEECCCEEEECCCCEEEEEEEEECCCCCEEEEEHHHCCCCEEEEEECCH
EIKSFLNSKSSDVKMGVGIFEGRALQKDDILVSKDKFIPFNLRLRECENPLFKSPKEPIV
HHHHHHCCCCCCEEEEEEEECCCCCCCCCEEEECCCEEEEEEEHHHCCCHHHCCCCCCEE
RVILGTNEDAFTQKGIETFLNTTYKVGSKSDRMAIYAESGKSIEHKNSADIISDPAVFGS
EEEECCCCHHHHHHHHHHHHCCCEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEE
IQVPKSGIPIILMAARQSTGGYTKIATVIENDLNLLAQAKLGSSFKFRSISMQEALELYK
EECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHH
QREMKFKAMDQKINLDFENLI
HHHHHHHHCCCEECCCHHHCC
>Mature Secondary Structure 
SIKIIEASINSSLQDFGRKKFAKFGIARSGAMDEDALRMANILLGNKQDEAGIELCLKG
EEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEC
GKYKFLDENYFVLSGAEFEAKLNNQKIKTCKVYKANKGDILELDLAKIGFRGYLCVAGGF
CCEEEECCCEEEEECCCEEEECCCCEEEEEEEEECCCCCEEEEEHHHCCCCEEEEEECCH
EIKSFLNSKSSDVKMGVGIFEGRALQKDDILVSKDKFIPFNLRLRECENPLFKSPKEPIV
HHHHHHCCCCCCEEEEEEEECCCCCCCCCEEEECCCEEEEEEEHHHCCCHHHCCCCCCEE
RVILGTNEDAFTQKGIETFLNTTYKVGSKSDRMAIYAESGKSIEHKNSADIISDPAVFGS
EEEECCCCHHHHHHHHHHHHCCCEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEE
IQVPKSGIPIILMAARQSTGGYTKIATVIENDLNLLAQAKLGSSFKFRSISMQEALELYK
EECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHH
QREMKFKAMDQKINLDFENLI
HHHHHHHHCCCEECCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]