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The map label for this gene is ycgF [H]

Identifier: 153952097

GI number: 153952097

Start: 623394

End: 623993

Strand: Direct

Name: ycgF [H]

Synonym: JJD26997_0687

Alternate gene names: 153952097

Gene position: 623394-623993 (Clockwise)

Preceding gene: 153951135

Following gene: 153952252

Centisome position: 33.79

GC content: 29.33

Gene sequence:

>600_bases
ATGTTTGATTCTTTTTTAAGTGGAGTTTTTTTGGGCTTTGGAGTGAGTGTGCCTTTTGGACCTGTAAATATTTTGATTTT
AACTTATGCGTTAAAAGCTTTTAAAAATTCCATAGCTGTGGGACTTGGAGCATTTTGTATAGATATGCTTTATCTTTTTT
TGCTTCAATTTGGGCTTTTAAATTTCTTAGATAATGTCATTTTTATGCGTTCTTTGGCGATTTTTGGTTTTTGTTTTCTA
ACTTATATGGCGTATTTGATGCTAAGAAAAAAGAAAGAAAGCTTAAATTTAGAGCATAAAGAATTTAAAGAAAGTCTTTT
GAAAAGCTATATCAAAGGAGCTTTTTTAAATGGTTCAAATCCTTTTGTTATAGGATTTTGGCTTAGTGCTGCAAGTGTGG
TTTTAAGTAGTGATCATGCTTATTTGATGACTTTAGGGCTTGTTATGGCTATACTTTTTTGGGTAAGTGCTTTAGCCTTT
GTGGTGGCAAGATATAGTCATGTTTTTAGTGCAAAAGTTGTTTTTATAATCAATATAATTTCAGCTATAATTATAGAGTA
TTTTGCTCTTAATTTATTATATAAAACTTTCTTAGGATAA

Upstream 100 bases:

>100_bases
GCGAATTTAGAGTGGTATTTTGATAAAATCTATATAGAAGATATTATAAGCGCTATCGATAAAATCGTACTTGATATAGA
AAATTTTATGAAAGATGGTA

Downstream 100 bases:

>100_bases
AAAATGAATGCAAAAGAATTTTTAATCGAACTTTTAAAATTTAAATCTGTTACGCCAAATGATGATGGAGCTTTAAATTT
CATCGCTATGGAACTGAGTG

Product: amino acid transporter LysE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MFDSFLSGVFLGFGVSVPFGPVNILILTYALKAFKNSIAVGLGAFCIDMLYLFLLQFGLLNFLDNVIFMRSLAIFGFCFL
TYMAYLMLRKKKESLNLEHKEFKESLLKSYIKGAFLNGSNPFVIGFWLSAASVVLSSDHAYLMTLGLVMAILFWVSALAF
VVARYSHVFSAKVVFIINIISAIIIEYFALNLLYKTFLG

Sequences:

>Translated_199_residues
MFDSFLSGVFLGFGVSVPFGPVNILILTYALKAFKNSIAVGLGAFCIDMLYLFLLQFGLLNFLDNVIFMRSLAIFGFCFL
TYMAYLMLRKKKESLNLEHKEFKESLLKSYIKGAFLNGSNPFVIGFWLSAASVVLSSDHAYLMTLGLVMAILFWVSALAF
VVARYSHVFSAKVVFIINIISAIIIEYFALNLLYKTFLG
>Mature_199_residues
MFDSFLSGVFLGFGVSVPFGPVNILILTYALKAFKNSIAVGLGAFCIDMLYLFLLQFGLLNFLDNVIFMRSLAIFGFCFL
TYMAYLMLRKKKESLNLEHKEFKESLLKSYIKGAFLNGSNPFVIGFWLSAASVVLSSDHAYLMTLGLVMAILFWVSALAF
VVARYSHVFSAKVVFIINIISAIIIEYFALNLLYKTFLG

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22324; Mature: 22324

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDSFLSGVFLGFGVSVPFGPVNILILTYALKAFKNSIAVGLGAFCIDMLYLFLLQFGLL
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NFLDNVIFMRSLAIFGFCFLTYMAYLMLRKKKESLNLEHKEFKESLLKSYIKGAFLNGSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC
PFVIGFWLSAASVVLSSDHAYLMTLGLVMAILFWVSALAFVVARYSHVFSAKVVFIINII
CEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAIIIEYFALNLLYKTFLG
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFDSFLSGVFLGFGVSVPFGPVNILILTYALKAFKNSIAVGLGAFCIDMLYLFLLQFGLL
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NFLDNVIFMRSLAIFGFCFLTYMAYLMLRKKKESLNLEHKEFKESLLKSYIKGAFLNGSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC
PFVIGFWLSAASVVLSSDHAYLMTLGLVMAILFWVSALAFVVARYSHVFSAKVVFIINII
CEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAIIIEYFALNLLYKTFLG
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]