| Definition | Campylobacter jejuni subsp. doylei 269.97, complete genome. |
|---|---|
| Accession | NC_009707 |
| Length | 1,845,106 |
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The map label for this gene is hemH [H]
Identifier: 153951990
GI number: 153951990
Start: 1272594
End: 1273505
Strand: Direct
Name: hemH [H]
Synonym: JJD26997_1433
Alternate gene names: 153951990
Gene position: 1272594-1273505 (Clockwise)
Preceding gene: 153951743
Following gene: 153951454
Centisome position: 68.97
GC content: 27.74
Gene sequence:
>912_bases GTGAGATTAGTTTTATTTTTAAATATGGGCGGAGCTATGAATTTACAAGATTGTGAAGTTTTTTTAAAAAATATGTTTAA TGATCCTTATATTTTAGGAATCAAAAATCGATTTTTAAGAAAATTTGTAGCGTGGATCATAACAAAAGCTCGCGTTAAAG CCATGCAAGAAAACTATAAAAAAATGGGCGGAAAATCCCCTTTAAACGAACTTACTCAAAGCCTGTGTGACAAGCTTAAT TTAAAACAAGATGAATTTAAATTTGATTTTGTAAATCTTTATGTACCTCCTTTTGCCACAGAAATTTTGCAAAAATACAC TTTAAATGAAAATGATGAAATCATTCTTTTTCCACTTTATCCACACCATTCTTGCACCACAGTAACTTCATCTTTAGAAA TTCTGCAAGATGAAATTTCAAAGCAAAAAATTCAAGCAAAAGTAAAAACTATAGATATTTTTTACAAAAATAAACTTTAT AATGAGATGATAGTTTCGCACATTTTGGCTAAAAAAAATAAATTTGATGCCAAAATTTTGATTTTTTCAGCGCATTCTTT ACCACAAAGCATTATTGATAAGGGTGATTTATACGAAAAGCATGTAAAGGATCATGTAGAAATTTTAAAAGAAAAATTAA AAGATCATTTTGATGAATTTATTTTAGCTTATCAGTCTAAACTAGGCCCTGTAAAATGGCTTGAACCAAATACAAGCGAT GTTTTAGCAAATTTAAACGATAAAGCTTTGATTTATCCTATTTCTTTTTGCATTGATTGTTCTGAAACGATTTTTGAACT AGGTATGGAGTATAAACATTTAGCAAAATGTGATTATGATTTGATAAGTTGCCCTAATGATAGTGATGAATTTGCCCAAT TTATTTTAAAGTATTTATCTGATCTTAACTAA
Upstream 100 bases:
>100_bases GAGAACATGAAGCTTTGTTAAAACTTATCGATAATCAACCCAATCATTTAGCCAGCACAAGCGATGCTTACAAAGTTCAA GAAATTTTAGAAAGGTTTGC
Downstream 100 bases:
>100_bases GAATGAATTTAAACCCTGCTACAAGCCCACTAAGTCCACCTAAAATAGTCGGTTTTTTATGGATGATCCACTCAAGCACT ACCCATTGTAAAGTAATGAC
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MRLVLFLNMGGAMNLQDCEVFLKNMFNDPYILGIKNRFLRKFVAWIITKARVKAMQENYKKMGGKSPLNELTQSLCDKLN LKQDEFKFDFVNLYVPPFATEILQKYTLNENDEIILFPLYPHHSCTTVTSSLEILQDEISKQKIQAKVKTIDIFYKNKLY NEMIVSHILAKKNKFDAKILIFSAHSLPQSIIDKGDLYEKHVKDHVEILKEKLKDHFDEFILAYQSKLGPVKWLEPNTSD VLANLNDKALIYPISFCIDCSETIFELGMEYKHLAKCDYDLISCPNDSDEFAQFILKYLSDLN
Sequences:
>Translated_303_residues MRLVLFLNMGGAMNLQDCEVFLKNMFNDPYILGIKNRFLRKFVAWIITKARVKAMQENYKKMGGKSPLNELTQSLCDKLN LKQDEFKFDFVNLYVPPFATEILQKYTLNENDEIILFPLYPHHSCTTVTSSLEILQDEISKQKIQAKVKTIDIFYKNKLY NEMIVSHILAKKNKFDAKILIFSAHSLPQSIIDKGDLYEKHVKDHVEILKEKLKDHFDEFILAYQSKLGPVKWLEPNTSD VLANLNDKALIYPISFCIDCSETIFELGMEYKHLAKCDYDLISCPNDSDEFAQFILKYLSDLN >Mature_303_residues MRLVLFLNMGGAMNLQDCEVFLKNMFNDPYILGIKNRFLRKFVAWIITKARVKAMQENYKKMGGKSPLNELTQSLCDKLN LKQDEFKFDFVNLYVPPFATEILQKYTLNENDEIILFPLYPHHSCTTVTSSLEILQDEISKQKIQAKVKTIDIFYKNKLY NEMIVSHILAKKNKFDAKILIFSAHSLPQSIIDKGDLYEKHVKDHVEILKEKLKDHFDEFILAYQSKLGPVKWLEPNTSD VLANLNDKALIYPISFCIDCSETIFELGMEYKHLAKCDYDLISCPNDSDEFAQFILKYLSDLN
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499021, Length=291, Percent_Identity=31.6151202749141, Blast_Score=129, Evalue=5e-30, Organism=Homo sapiens, GI60499025, Length=291, Percent_Identity=31.6151202749141, Blast_Score=129, Evalue=5e-30, Organism=Escherichia coli, GI1786681, Length=274, Percent_Identity=22.6277372262774, Blast_Score=77, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6324750, Length=283, Percent_Identity=27.5618374558304, Blast_Score=102, Evalue=9e-23, Organism=Drosophila melanogaster, GI17864156, Length=321, Percent_Identity=26.4797507788162, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI24651774, Length=257, Percent_Identity=26.8482490272374, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI45552018, Length=132, Percent_Identity=29.5454545454545, Blast_Score=68, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 35264; Mature: 35264
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLVLFLNMGGAMNLQDCEVFLKNMFNDPYILGIKNRFLRKFVAWIITKARVKAMQENYK CEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH KMGGKSPLNELTQSLCDKLNLKQDEFKFDFVNLYVPPFATEILQKYTLNENDEIILFPLY HCCCCCCHHHHHHHHHHHCCCCCHHCEEEEEEEECCHHHHHHHHHHCCCCCCCEEEEECC PHHSCTTVTSSLEILQDEISKQKIQAKVKTIDIFYKNKLYNEMIVSHILAKKNKFDAKIL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE IFSAHSLPQSIIDKGDLYEKHVKDHVEILKEKLKDHFDEFILAYQSKLGPVKWLEPNTSD EEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHH VLANLNDKALIYPISFCIDCSETIFELGMEYKHLAKCDYDLISCPNDSDEFAQFILKYLS HHHCCCCCEEEEEHHHHHCCHHHHHHHCCHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHH DLN CCC >Mature Secondary Structure MRLVLFLNMGGAMNLQDCEVFLKNMFNDPYILGIKNRFLRKFVAWIITKARVKAMQENYK CEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH KMGGKSPLNELTQSLCDKLNLKQDEFKFDFVNLYVPPFATEILQKYTLNENDEIILFPLY HCCCCCCHHHHHHHHHHHCCCCCHHCEEEEEEEECCHHHHHHHHHHCCCCCCCEEEEECC PHHSCTTVTSSLEILQDEISKQKIQAKVKTIDIFYKNKLYNEMIVSHILAKKNKFDAKIL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE IFSAHSLPQSIIDKGDLYEKHVKDHVEILKEKLKDHFDEFILAYQSKLGPVKWLEPNTSD EEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHH VLANLNDKALIYPISFCIDCSETIFELGMEYKHLAKCDYDLISCPNDSDEFAQFILKYLS HHHCCCCCEEEEEHHHHHCCHHHHHHHCCHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHH DLN CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA