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The map label for this gene is yadT [C]

Identifier: 153951923

GI number: 153951923

Start: 1503434

End: 1504528

Strand: Direct

Name: yadT [C]

Synonym: JJD26997_1702

Alternate gene names: 153951923

Gene position: 1503434-1504528 (Clockwise)

Preceding gene: 153950966

Following gene: 153952324

Centisome position: 81.48

GC content: 32.15

Gene sequence:

>1095_bases
ATGAGAATTTTATTTTATTTTATAACATTGATAGCGTGTCTTAATGCTAAAGAGGTAGTAATTAAAGATATTTTAGATAG
AGAAGTTAAGGTGGATTTGCCTGCAAAACGCATTGTTTTAGGATTTTACTACACTGACTTTTTAGCAGTAGGTGGAATTG
AAGCTTTCGATAAGGTTGTAGGTTTTGTAAAAGATGGTTGGGCTGTGTATGCAAAAAATAGTTATGAATTTTATGCTCAA
TTTATCCCTCGCATTAAAAATTTAGCCGATGTAGGAGACCCTCAATTTGGAACCTTTTCGGCAGAAAAAGTGCTTTCCTT
AAAACCTGATTTACTCATTTTAGCAGCCTGGCAATATGAGGTAATTCGAGAAGATTTAGCCATTTTTGAAAAGCACAATA
TCCCTGTTGTTGTGATTGATTACAATCAAGAAAGTGTAGCTAAGCATAGTCTTAGTACAGAAATTTTGGGACAAATTTTG
GGACAAGAAGAAAAAGCTTTGGAATTAGTCGATTTTTATAAAAGTAGAATTAGTGTCATACAAGAGAGAATAAAATCAGC
ATCACTACCTAAGCCAAAAATTTACATAGAATTTGGCAATAAAGGTCCACAAGAAAATAGCTTTACTTTTGGTGATGATA
TGTGGGGAGCTTTGATTGAATTAGCAGGTGGTGAAAATATTGCTAAAAATTTGGTGAAAAAATGGGGTGTAATTAATCCC
GAACTTGTCTTAACAGCTAATCCTGATATTATCATTATTACAGGTAGAGAAAGTGATTTGGAAAAAAACAAAGAAGCTAT
GGTTATGGGCTTTGATATTGAAGAAAATGAGGCTTTAAAAAGACTTGAAAGATTTAAATTTAGAAAAGGATACGAGAATT
TAAATGCTATCATTCACAACAAACTCTTCGGTGCTTATCATAGAGCAAGTACAACTTTAGCCGATGTGGCTATGGTAGAA
TTTATAGCTAAAACTCTTTATCCTAGCCTTTTTAAAGATATTGACCCCTTAAAAACTTATTTGGATTTTCATCAAAAATT
TCTTCTAGCTAAACCTCAAGGTACTTTTATGATTAAGGCAAAAAATGCAAAATAA

Upstream 100 bases:

>100_bases
CAAGCTTGTTTGAGGATATTGACCCAATTCAAACTTATATTGATTATCACAAAACCTATCTCCCTGTTGTTCCGCAAGGC
ACCTTTGGGATACAAGCAAA

Downstream 100 bases:

>100_bases
AATTGTAGCCACGCTCAAAGCACATCGAAAAAGAGAATTAAAAAGATTTTATATCATCATAAGTTTTTTAATGATTGCTT
TCGTCTCTTTGATTTTTGAC

Product: periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MRILFYFITLIACLNAKEVVIKDILDREVKVDLPAKRIVLGFYYTDFLAVGGIEAFDKVVGFVKDGWAVYAKNSYEFYAQ
FIPRIKNLADVGDPQFGTFSAEKVLSLKPDLLILAAWQYEVIREDLAIFEKHNIPVVVIDYNQESVAKHSLSTEILGQIL
GQEEKALELVDFYKSRISVIQERIKSASLPKPKIYIEFGNKGPQENSFTFGDDMWGALIELAGGENIAKNLVKKWGVINP
ELVLTANPDIIIITGRESDLEKNKEAMVMGFDIEENEALKRLERFKFRKGYENLNAIIHNKLFGAYHRASTTLADVAMVE
FIAKTLYPSLFKDIDPLKTYLDFHQKFLLAKPQGTFMIKAKNAK

Sequences:

>Translated_364_residues
MRILFYFITLIACLNAKEVVIKDILDREVKVDLPAKRIVLGFYYTDFLAVGGIEAFDKVVGFVKDGWAVYAKNSYEFYAQ
FIPRIKNLADVGDPQFGTFSAEKVLSLKPDLLILAAWQYEVIREDLAIFEKHNIPVVVIDYNQESVAKHSLSTEILGQIL
GQEEKALELVDFYKSRISVIQERIKSASLPKPKIYIEFGNKGPQENSFTFGDDMWGALIELAGGENIAKNLVKKWGVINP
ELVLTANPDIIIITGRESDLEKNKEAMVMGFDIEENEALKRLERFKFRKGYENLNAIIHNKLFGAYHRASTTLADVAMVE
FIAKTLYPSLFKDIDPLKTYLDFHQKFLLAKPQGTFMIKAKNAK
>Mature_364_residues
MRILFYFITLIACLNAKEVVIKDILDREVKVDLPAKRIVLGFYYTDFLAVGGIEAFDKVVGFVKDGWAVYAKNSYEFYAQ
FIPRIKNLADVGDPQFGTFSAEKVLSLKPDLLILAAWQYEVIREDLAIFEKHNIPVVVIDYNQESVAKHSLSTEILGQIL
GQEEKALELVDFYKSRISVIQERIKSASLPKPKIYIEFGNKGPQENSFTFGDDMWGALIELAGGENIAKNLVKKWGVINP
ELVLTANPDIIIITGRESDLEKNKEAMVMGFDIEENEALKRLERFKFRKGYENLNAIIHNKLFGAYHRASTTLADVAMVE
FIAKTLYPSLFKDIDPLKTYLDFHQKFLLAKPQGTFMIKAKNAK

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 41379; Mature: 41379

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILFYFITLIACLNAKEVVIKDILDREVKVDLPAKRIVLGFYYTDFLAVGGIEAFDKVV
CCHHHHHHHHHHHCCCHHHHHHHHHCCCEEECCCHHHHEEHHHHHHHHHHCCHHHHHHHH
GFVKDGWAVYAKNSYEFYAQFIPRIKNLADVGDPQFGTFSAEKVLSLKPDLLILAAWQYE
HHHHCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEEEHHHHH
VIREDLAIFEKHNIPVVVIDYNQESVAKHSLSTEILGQILGQEEKALELVDFYKSRISVI
HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QERIKSASLPKPKIYIEFGNKGPQENSFTFGDDMWGALIELAGGENIAKNLVKKWGVINP
HHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCC
ELVLTANPDIIIITGRESDLEKNKEAMVMGFDIEENEALKRLERFKFRKGYENLNAIIHN
CEEEECCCCEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHH
KLFGAYHRASTTLADVAMVEFIAKTLYPSLFKDIDPLKTYLDFHQKFLLAKPQGTFMIKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHEEECCCCCEEEEE
KNAK
CCCC
>Mature Secondary Structure
MRILFYFITLIACLNAKEVVIKDILDREVKVDLPAKRIVLGFYYTDFLAVGGIEAFDKVV
CCHHHHHHHHHHHCCCHHHHHHHHHCCCEEECCCHHHHEEHHHHHHHHHHCCHHHHHHHH
GFVKDGWAVYAKNSYEFYAQFIPRIKNLADVGDPQFGTFSAEKVLSLKPDLLILAAWQYE
HHHHCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEEEHHHHH
VIREDLAIFEKHNIPVVVIDYNQESVAKHSLSTEILGQILGQEEKALELVDFYKSRISVI
HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QERIKSASLPKPKIYIEFGNKGPQENSFTFGDDMWGALIELAGGENIAKNLVKKWGVINP
HHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCC
ELVLTANPDIIIITGRESDLEKNKEAMVMGFDIEENEALKRLERFKFRKGYENLNAIIHN
CEEEECCCCEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHH
KLFGAYHRASTTLADVAMVEFIAKTLYPSLFKDIDPLKTYLDFHQKFLLAKPQGTFMIKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHEEECCCCCEEEEE
KNAK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]