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The map label for this gene is yrbE [C]

Identifier: 153951693

GI number: 153951693

Start: 1768997

End: 1770106

Strand: Direct

Name: yrbE [C]

Synonym: JJD26997_2006

Alternate gene names: 153951693

Gene position: 1768997-1770106 (Clockwise)

Preceding gene: 153951644

Following gene: 153952448

Centisome position: 95.88

GC content: 31.26

Gene sequence:

>1110_bases
ATGAATACAAATTTCAAATTTCAAAATAACACTCTTTTCATCTTTGGAATTTGGGATAAAACAAGCATTTATAAGTTAAA
AATAAAAGATTTTTTAGCTTTGATTCAAAGCAAGGAAGTGATTTTTGATTTTAAAGATCTAAAAGAAATCGATACTGCTG
GAGTGAGATTTTTCCTTGCTTTGGAAAATGACCTTAAAGATAAAAATATTAAAATCACCAAAGAAGGTTTAAATTCGCGC
TTTCAAACCCTTTTTGAACTTTGCGAAAAAAACTACCAAAGACTAAACAAAACAAAAAAATCGCATAAAAATTTCAGTGA
ATACTTTATCGATCTTGGAAAATTAAGTTTAGAACTTTTAAAAATTTTAAGAAAATTCATCAATTTCACAGGAGCTTTTT
TCACAAGTCTTTTTTTATGCCTTAAAAATCCTAAAAATTTTCGCTTTATTGCTTTTTTATACCATATAGAAAATTCTGCT
TTTAAAGCCTTGCCTATAGTTATTTTAACTGCTCTTTTGGTAGGAGTGGTTTTAGCCTATCAGGCTGCTTATCAACTCGC
ACAATTTGGAGCCAATATTTTCATAGTGGATTTGATGGGAATTTCGGCCACTAGAGAACTTGCACCTTTAATCGCTGCCA
TAGTGATCGCAGGAAGAAGTGCAAGCTCTTATACCGCACAAATTGGAGTTATGAAAATTACTGATGAAATTGCAGCTATG
AATACTATGGGTTTTCGTTCTTTTGAATTTATTATTATTCCGCGTGTCATGGCTTTGGTAGTGGCCATGCCTTTAATCGT
TGCCATTAGCGATGCGATCAGTATTATAGGTGGAATGATGGTTGCAAAATTAAATCTTGATATTTCTTTTGCCGAATTTT
TAAGACGTTTTAGAGAAGCTGTAGATATAAAACATATTTTTATAGGACTTGTAAAAGCACCTATTTTTGGATTTTTAATA
GGGCTTATTGCTTGTTTTCGTGGTTTTGAGGTAAAAAACACTACACAAAGCATAGGAATTTATACGACAAAAAGCGTTGT
AAATGCTATTTTTTGGGTGATAGCCTTTGATGCTTTATTCTCTGTTATTTTAACTTCTGCAGGAATTTAA

Upstream 100 bases:

>100_bases
GGTATAAAAAGTTTTGGAGAAAGCGGCAAAGACAAAGATGTGTTTGAACACTTTGACTTTAGCGTTTCAAAGCTGATGAA
TTTCATCCTTAGCAAATAAA

Downstream 100 bases:

>100_bases
ATGGTTATTAAAGCACAAAATATCATTACAAAATTTGGAGAAAAAATCGTCCATGATGGCGTAAGTTTTGAAATCAAAAA
AAACGAAATTTTTGGTATTT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MNTNFKFQNNTLFIFGIWDKTSIYKLKIKDFLALIQSKEVIFDFKDLKEIDTAGVRFFLALENDLKDKNIKITKEGLNSR
FQTLFELCEKNYQRLNKTKKSHKNFSEYFIDLGKLSLELLKILRKFINFTGAFFTSLFLCLKNPKNFRFIAFLYHIENSA
FKALPIVILTALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM
NTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREAVDIKHIFIGLVKAPIFGFLI
GLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALFSVILTSAGI

Sequences:

>Translated_369_residues
MNTNFKFQNNTLFIFGIWDKTSIYKLKIKDFLALIQSKEVIFDFKDLKEIDTAGVRFFLALENDLKDKNIKITKEGLNSR
FQTLFELCEKNYQRLNKTKKSHKNFSEYFIDLGKLSLELLKILRKFINFTGAFFTSLFLCLKNPKNFRFIAFLYHIENSA
FKALPIVILTALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM
NTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREAVDIKHIFIGLVKAPIFGFLI
GLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALFSVILTSAGI
>Mature_369_residues
MNTNFKFQNNTLFIFGIWDKTSIYKLKIKDFLALIQSKEVIFDFKDLKEIDTAGVRFFLALENDLKDKNIKITKEGLNSR
FQTLFELCEKNYQRLNKTKKSHKNFSEYFIDLGKLSLELLKILRKFINFTGAFFTSLFLCLKNPKNFRFIAFLYHIENSA
FKALPIVILTALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM
NTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREAVDIKHIFIGLVKAPIFGFLI
GLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALFSVILTSAGI

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=249, Percent_Identity=29.718875502008, Blast_Score=103, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 41551; Mature: 41551

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTNFKFQNNTLFIFGIWDKTSIYKLKIKDFLALIQSKEVIFDFKDLKEIDTAGVRFFLA
CCCCEEEECCEEEEEEECCCCCEEEEEHHHHHHHHHCCHHEEEHHHHHHHHHCCEEEEEE
LENDLKDKNIKITKEGLNSRFQTLFELCEKNYQRLNKTKKSHKNFSEYFIDLGKLSLELL
ECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
KILRKFINFTGAFFTSLFLCLKNPKNFRFIAFLYHIENSAFKALPIVILTALLVGVVLAY
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM
HHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHEEEEEEHHHHHHHH
NTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHH
VDIKHIFIGLVKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHH
SVILTSAGI
HHHHHHCCC
>Mature Secondary Structure
MNTNFKFQNNTLFIFGIWDKTSIYKLKIKDFLALIQSKEVIFDFKDLKEIDTAGVRFFLA
CCCCEEEECCEEEEEEECCCCCEEEEEHHHHHHHHHCCHHEEEHHHHHHHHHCCEEEEEE
LENDLKDKNIKITKEGLNSRFQTLFELCEKNYQRLNKTKKSHKNFSEYFIDLGKLSLELL
ECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
KILRKFINFTGAFFTSLFLCLKNPKNFRFIAFLYHIENSAFKALPIVILTALLVGVVLAY
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM
HHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHEEEEEEHHHHHHHH
NTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHH
VDIKHIFIGLVKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHH
SVILTSAGI
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA