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The map label for this gene is rdxB [H]

Identifier: 153951520

GI number: 153951520

Start: 1403302

End: 1404678

Strand: Direct

Name: rdxB [H]

Synonym: JJD26997_1588

Alternate gene names: 153951520

Gene position: 1403302-1404678 (Clockwise)

Preceding gene: 153951056

Following gene: 153952460

Centisome position: 76.06

GC content: 27.67

Gene sequence:

>1377_bases
ATGCAAGGACACATTACAAAATATACAAAAAAACGATATTTTGTATATTTAATTGCAAGTATTATCATATTTGCCCTACC
TTTCATAAGAATTAATGAGAATCATTTTTTTCTTTTAAGTTTTGATCACTCTAAATTAAACCTATTTTTTATTTCTTTTT
CAACACAAGAATTTTATCTCATGCCTTTTGTTCTTATATTTCTTTTTTTATTTATTTTTTTTATTACAACTTTAGGTGGA
AGAATTTGGTGCGCTTGGAGTTGTCCACAAACGATTTTTAGAGTTATATATAGAGATATCATACAAACTAAATTTCTTAA
AATTCGCAAAAATATCAATAACAAACAAAAAGAATACGAGGGACAATATTTTAAAAAATTTCTTGGAGTAATAATTTTTT
ATTTTATATCTTTAGTTGCTGTTAGTAATTTACTTTGGTACTTTATTCCTCCTGAAGATTTTTTCAATTATATTCAAAAT
CTTGGCGAGCATCTACTTTTACTTGGAATTTTATTTTGTGCTAGCTTACTTTTTACTTTGGATATTACCTATTTACAAGA
AAAATTTTGTGTTTATGTCTGTCCTTATGCAAGAATACAATCTGTAATGTTTGATCATGATACAATGCAAGTGATTTATG
ATGAAAAACGCGGAGGCTTGATTTATGATGGATACACCAAACTTCATAAAAAACCGCCTGAGGGAGAATGCATAGGTTGC
GAAGCCTGTGTTAGGATCTGTCCAACTCATATTGACATACGCAAAGGAATGCAACTTGAATGTATTAATTGTCTTGAATG
TGCCGATGCTTGCTCTAAGGTACAAAGCAAATTTAATCGTCCAAGTTTGATCAATTGGACAAGTGCAAAAGCTATTGAAA
CGCGTTCTAAGGTTCATTATTTAAGATTTAGAACGATAGCATATTTTATAGTTCTTTTAATTGCTTTATTGGCTTTAATT
ATCATGGGAAGCAAAAAAGAAAGCATGCTTTTAAATATCAATCGTAGTAGTGAATTATATAATATTTCAAATGTTAAAGG
TGAATTAGTCATTTCAAATGCTTATACCTTTTTGTTTCAAAATACAGATTCTAAACCTCATGAATATTATTTTACAGCAA
ATTTAGAAGGGATAAATGATGGAATTGAAATCATAAGACCAAACAAACCTTTTAAATTAAAAGCAGGAGAACAAGTTAAA
AAAATAGTTGTTATCAAAGCTACAAAAAATTTAGCAAACAATGATAAAAAAGATATAATCTTTCCTTTACATATAAAAGC
TTACGCGAAGGATAATAAAAAAATTTCGGTTTTTAGAAAAAGTATATTTGTATACCCCAAAAACACTCTTATAAAGGATA
AAAATGAACCCAAATAG

Upstream 100 bases:

>100_bases
CTTATTAATTCTAACTTAGAAAGCATTTAAAAATTGTTTTAGTTTTTATCGGTTATAATCCTCAATTACAAAGTGCTAAA
ATTATAATTAAGGTCTAAAA

Downstream 100 bases:

>100_bases
AACACCATCACAAAAAGTTTTAGCTAGACAAGAGAAAATCAAAACAGTGGCCTTAGAGCTTTTTTTAACAAAAGGTTACC
AAAAAACAAGTTTGAGTGAT

Product: iron-sulfur cluster-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MQGHITKYTKKRYFVYLIASIIIFALPFIRINENHFFLLSFDHSKLNLFFISFSTQEFYLMPFVLIFLFLFIFFITTLGG
RIWCAWSCPQTIFRVIYRDIIQTKFLKIRKNINNKQKEYEGQYFKKFLGVIIFYFISLVAVSNLLWYFIPPEDFFNYIQN
LGEHLLLLGILFCASLLFTLDITYLQEKFCVYVCPYARIQSVMFDHDTMQVIYDEKRGGLIYDGYTKLHKKPPEGECIGC
EACVRICPTHIDIRKGMQLECINCLECADACSKVQSKFNRPSLINWTSAKAIETRSKVHYLRFRTIAYFIVLLIALLALI
IMGSKKESMLLNINRSSELYNISNVKGELVISNAYTFLFQNTDSKPHEYYFTANLEGINDGIEIIRPNKPFKLKAGEQVK
KIVVIKATKNLANNDKKDIIFPLHIKAYAKDNKKISVFRKSIFVYPKNTLIKDKNEPK

Sequences:

>Translated_458_residues
MQGHITKYTKKRYFVYLIASIIIFALPFIRINENHFFLLSFDHSKLNLFFISFSTQEFYLMPFVLIFLFLFIFFITTLGG
RIWCAWSCPQTIFRVIYRDIIQTKFLKIRKNINNKQKEYEGQYFKKFLGVIIFYFISLVAVSNLLWYFIPPEDFFNYIQN
LGEHLLLLGILFCASLLFTLDITYLQEKFCVYVCPYARIQSVMFDHDTMQVIYDEKRGGLIYDGYTKLHKKPPEGECIGC
EACVRICPTHIDIRKGMQLECINCLECADACSKVQSKFNRPSLINWTSAKAIETRSKVHYLRFRTIAYFIVLLIALLALI
IMGSKKESMLLNINRSSELYNISNVKGELVISNAYTFLFQNTDSKPHEYYFTANLEGINDGIEIIRPNKPFKLKAGEQVK
KIVVIKATKNLANNDKKDIIFPLHIKAYAKDNKKISVFRKSIFVYPKNTLIKDKNEPK
>Mature_458_residues
MQGHITKYTKKRYFVYLIASIIIFALPFIRINENHFFLLSFDHSKLNLFFISFSTQEFYLMPFVLIFLFLFIFFITTLGG
RIWCAWSCPQTIFRVIYRDIIQTKFLKIRKNINNKQKEYEGQYFKKFLGVIIFYFISLVAVSNLLWYFIPPEDFFNYIQN
LGEHLLLLGILFCASLLFTLDITYLQEKFCVYVCPYARIQSVMFDHDTMQVIYDEKRGGLIYDGYTKLHKKPPEGECIGC
EACVRICPTHIDIRKGMQLECINCLECADACSKVQSKFNRPSLINWTSAKAIETRSKVHYLRFRTIAYFIVLLIALLALI
IMGSKKESMLLNINRSSELYNISNVKGELVISNAYTFLFQNTDSKPHEYYFTANLEGINDGIEIIRPNKPFKLKAGEQVK
KIVVIKATKNLANNDKKDIIFPLHIKAYAKDNKKISVFRKSIFVYPKNTLIKDKNEPK

Specific function: Involved in a membrane generated redox signal; required to maintain repression of photosynthesis gene expression in the presence of oxygen [H]

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014116
- InterPro:   IPR013783 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53583; Mature: 53583

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGHITKYTKKRYFVYLIASIIIFALPFIRINENHFFLLSFDHSKLNLFFISFSTQEFYL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEEECCCEEEEEEEEECCCCHHH
MPFVLIFLFLFIFFITTLGGRIWCAWSCPQTIFRVIYRDIIQTKFLKIRKNINNKQKEYE
HHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
GQYFKKFLGVIIFYFISLVAVSNLLWYFIPPEDFFNYIQNLGEHLLLLGILFCASLLFTL
HHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DITYLQEKFCVYVCPYARIQSVMFDHDTMQVIYDEKRGGLIYDGYTKLHKKPPEGECIGC
HHHHHHCCCEEEECCHHHHHHHHHCCCCEEEEEECCCCCEEECCHHHHCCCCCCCCEECH
EACVRICPTHIDIRKGMQLECINCLECADACSKVQSKFNRPSLINWTSAKAIETRSKVHY
HHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHH
LRFRTIAYFIVLLIALLALIIMGSKKESMLLNINRSSELYNISNVKGELVISNAYTFLFQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCCEEEEEEEEEEEEE
NTDSKPHEYYFTANLEGINDGIEIIRPNKPFKLKAGEQVKKIVVIKATKNLANNDKKDII
CCCCCCCEEEEEEECCCCCCCCEEECCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCEE
FPLHIKAYAKDNKKISVFRKSIFVYPKNTLIKDKNEPK
EEEEEEEEECCCCEEEEEEEEEEEECCCCEECCCCCCC
>Mature Secondary Structure
MQGHITKYTKKRYFVYLIASIIIFALPFIRINENHFFLLSFDHSKLNLFFISFSTQEFYL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEEECCCEEEEEEEEECCCCHHH
MPFVLIFLFLFIFFITTLGGRIWCAWSCPQTIFRVIYRDIIQTKFLKIRKNINNKQKEYE
HHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
GQYFKKFLGVIIFYFISLVAVSNLLWYFIPPEDFFNYIQNLGEHLLLLGILFCASLLFTL
HHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DITYLQEKFCVYVCPYARIQSVMFDHDTMQVIYDEKRGGLIYDGYTKLHKKPPEGECIGC
HHHHHHCCCEEEECCHHHHHHHHHCCCCEEEEEECCCCCEEECCHHHHCCCCCCCCEECH
EACVRICPTHIDIRKGMQLECINCLECADACSKVQSKFNRPSLINWTSAKAIETRSKVHY
HHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHH
LRFRTIAYFIVLLIALLALIIMGSKKESMLLNINRSSELYNISNVKGELVISNAYTFLFQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCCEEEEEEEEEEEEE
NTDSKPHEYYFTANLEGINDGIEIIRPNKPFKLKAGEQVKKIVVIKATKNLANNDKKDII
CCCCCCCEEEEEEECCCCCCCCEEECCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCEE
FPLHIKAYAKDNKKISVFRKSIFVYPKNTLIKDKNEPK
EEEEEEEEECCCCEEEEEEEEEEEECCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9068641; 7592416 [H]