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The map label for this gene is yggV [C]

Identifier: 153951403

GI number: 153951403

Start: 252195

End: 252797

Strand: Direct

Name: yggV [C]

Synonym: JJD26997_0276

Alternate gene names: 153951403

Gene position: 252195-252797 (Clockwise)

Preceding gene: 153952390

Following gene: 153951333

Centisome position: 13.67

GC content: 31.67

Gene sequence:

>603_bases
ATGAAGATTATCCTAGCTACGAGTAATAAGCATAAGGTTTTAGAACTTAAAGAAATTTTAAAAGATTTTGAAATTTATGC
TTTTGATGAAGTTTTAACGCCTTTTGAGATTGAAGAAAATGGAAAAACTTTTAAAGAAAATGCTTTGATTAAAGCAAGAG
CAGTTTTTAATGCTTTGGATGAAAAGCAAAAAAAAGATTTTATCGCTTTAAGTGATGATAGTGGTATTTGTGTAGATGTT
TTAGAAGGAAATCCAGGAATTTATTCTGCTCGATTTAGCGGTAAGGGCGATGATAAAAGTAATCGTGATAAACTTGTCAA
TGAAATGATAAAAAAAGGTTTTAATCAAAGCAGGGCACATTATGTTGCTGCTATTGCTATGGTAGGTTTGATGGGGGAAT
TTAGCACGCATGGAACAATGTATGGAAAAGTGATAGATACAGAAAAAGGTGAAAATGGTTTTGGCTATGATAGCCTTTTT
ATTCCAAAGGGTTTTGATAAAACCTTAGCCCAGCTTAGCGTGGATGAGAAGAATAACATCTCTCATCGTTTTAAAGCTTT
AGAGCTTGCAAAAATCATTTTAAAGATTTTAACAAAAGGATAA

Upstream 100 bases:

>100_bases
TGATTAACATCGCTTTATCATTTGATATTTAAAAGCTACGCACAAGGATAAATTTTATAAAATCATATTTTTGTTTTGAT
ATTATTTTGGAGATTTTGTT

Downstream 100 bases:

>100_bases
GAAATGAAAAATTTTTTAAAATATATAGCTATTATTGTTTTAATATATGCTCTTTATGTTGGTTTGGAAACTTGGCTTTC
TTAGAATAAATAGTGATTAA

Product: putative deoxyribonucleotide triphosphate pyrophosphatase

Products: NA

Alternate protein names: Nucleoside triphosphate phosphohydrolase; NTPase [H]

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKIILATSNKHKVLELKEILKDFEIYAFDEVLTPFEIEENGKTFKENALIKARAVFNALDEKQKKDFIALSDDSGICVDV
LEGNPGIYSARFSGKGDDKSNRDKLVNEMIKKGFNQSRAHYVAAIAMVGLMGEFSTHGTMYGKVIDTEKGENGFGYDSLF
IPKGFDKTLAQLSVDEKNNISHRFKALELAKIILKILTKG

Sequences:

>Translated_200_residues
MKIILATSNKHKVLELKEILKDFEIYAFDEVLTPFEIEENGKTFKENALIKARAVFNALDEKQKKDFIALSDDSGICVDV
LEGNPGIYSARFSGKGDDKSNRDKLVNEMIKKGFNQSRAHYVAAIAMVGLMGEFSTHGTMYGKVIDTEKGENGFGYDSLF
IPKGFDKTLAQLSVDEKNNISHRFKALELAKIILKILTKG
>Mature_200_residues
MKIILATSNKHKVLELKEILKDFEIYAFDEVLTPFEIEENGKTFKENALIKARAVFNALDEKQKKDFIALSDDSGICVDV
LEGNPGIYSARFSGKGDDKSNRDKLVNEMIKKGFNQSRAHYVAAIAMVGLMGEFSTHGTMYGKVIDTEKGENGFGYDSLF
IPKGFDKTLAQLSVDEKNNISHRFKALELAKIILKILTKG

Specific function: Hydrolyzes non-standard nucleotides such as XTP and dITP/ITP. Might exclude non-standard purines from DNA precursor pool, preventing thus incorporation into DNA and avoiding chromosomal lesions [H]

COG id: COG0127

COG function: function code F; Xanthosine triphosphate pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAM1 NTPase family [H]

Homologues:

Organism=Escherichia coli, GI1789324, Length=210, Percent_Identity=39.5238095238095, Blast_Score=111, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17556833, Length=193, Percent_Identity=30.5699481865285, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002637
- InterPro:   IPR020922 [H]

Pfam domain/function: PF01725 Ham1p_like [H]

EC number: =3.6.1.15 [H]

Molecular weight: Translated: 22346; Mature: 22346

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIILATSNKHKVLELKEILKDFEIYAFDEVLTPFEIEENGKTFKENALIKARAVFNALD
CEEEEECCCCCHHHHHHHHHHHHHHEEHHHHCCCEEECCCCCEEHHHHHHHHHHHHHHHH
EKQKKDFIALSDDSGICVDVLEGNPGIYSARFSGKGDDKSNRDKLVNEMIKKGFNQSRAH
HHHCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHH
YVAAIAMVGLMGEFSTHGTMYGKVIDTEKGENGFGYDSLFIPKGFDKTLAQLSVDEKNNI
HHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCH
SHRFKALELAKIILKILTKG
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIILATSNKHKVLELKEILKDFEIYAFDEVLTPFEIEENGKTFKENALIKARAVFNALD
CEEEEECCCCCHHHHHHHHHHHHHHEEHHHHCCCEEECCCCCEEHHHHHHHHHHHHHHHH
EKQKKDFIALSDDSGICVDVLEGNPGIYSARFSGKGDDKSNRDKLVNEMIKKGFNQSRAH
HHHCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHH
YVAAIAMVGLMGEFSTHGTMYGKVIDTEKGENGFGYDSLFIPKGFDKTLAQLSVDEKNNI
HHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCH
SHRFKALELAKIILKILTKG
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA